EnhancerDB
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Enhancers that regulate LYPD3[ENSG00000124466.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 43874725 43878875 enh108725 43969812 90937
Lung (PC-9)
chr19 43882265 43887195 enh109837 43969812 82617
Stomach
chr19 43926865 43936515 enh52895 43969812 33297
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Pancreas Neural Stem Cells (H9) Stomach
chr19 43934404 43934558 vista29507 43969812 35254
VISTA
chr19 43939525 43945726 enh44667 43969812 24086
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Stomach Colon (HCT116) Lung (PC-9) Muscle (Myotube) Thymus Heart
chr19 43943414 43943644 vista29508 43969812 26168
VISTA
chr19 43949325 43953475 enh108726 43969812 16337
Lung (PC-9)
chr19 43957565 43964155 enh18092 43969812 5657
Skin (Keratinocyte) Esophagus Muscle (A673) Placenta Lung (PC-9) Epithelial (MCF-7)
chr19 43973146 43973524 vista29509 43969812 3334
VISTA
chr19 43974415 43974832 vista29510 43969812 4603
VISTA
chr19 44018245 44029379 enh18093 43969812 48433
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr19 44032541 44032939 vista29511 43969812 62729
VISTA
chr19 44059605 44071235 enh32953 43969812 89793
Astrocyte Bone (Osteoblast) Muscle (A673) Blood (T-cell)
chr19 44066469 44066595 vista29512 43969812 96657
VISTA
chr19 44066872 44067293 vista29513 43969812 97060
VISTA
Transcript facotrs that regulate LYPD3[ENSG00000124466.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 43973153 43973166 ZBED1 JASPAR yes 43969812 3341 70852645
chr19 43973154 43973167 ZBED1 JASPAR yes 43969812 3342 70852646
chr19 43973169 43973175 TCF4 TRANSFAC yes 43969812 3357 70852647
chr19 43973190 43973194 YY1 TRANSFAC yes 43969812 3378 70852648
chr19 43973200 43973221 IRF1 JASPAR yes 43969812 3388 70852649
chr19 43973204 43973218 STAT1 JASPAR yes 43969812 3392 70852650
chr19 43973204 43973219 STAT2 JASPAR yes 43969812 3392 70852651
chr19 43973260 43973264 NFE TRANSFAC yes 43969812 3448 70852652
chr19 43973262 43973276 NR2F1 JASPAR yes 43969812 3450 70852653
chr19 43973282 43973286 YY1 TRANSFAC yes 43969812 3470 70852654
chr19 43973286 43973292 NFIC JASPAR yes 43969812 3474 70852655
chr19 43973298 43973317 REST JASPAR yes 43969812 3486 70852656
chr19 43973322 43973326 YY1 TRANSFAC yes 43969812 3510 70852657
chr19 43973322 43973333 CEBPA JASPAR yes 43969812 3510 70852658
chr19 43973323 43973333 CEBPB JASPAR yes 43969812 3511 70852659
chr19 43973323 43973333 CEBPD JASPAR yes 43969812 3511 70852660
chr19 43973323 43973333 CEBPE JASPAR yes 43969812 3511 70852661
chr19 43973323 43973334 CEBPB JASPAR yes 43969812 3511 70852662
chr19 43973332 43973346 NR2F1 JASPAR yes 43969812 3520 70852663
chr19 43973354 43973374 TP53 JASPAR yes 43969812 3542 70852664
chr19 43973363 43973367 YY1 TRANSFAC yes 43969812 3551 70852665
chr19 43973363 43973375 POU2F1 JASPAR yes 43969812 3551 70852666
chr19 43973364 43973373 POU3F4 JASPAR yes 43969812 3552 70852667
chr19 43973364 43973373 POU5F1B JASPAR yes 43969812 3552 70852668
chr19 43973373 43973388 NR2C2 JASPAR yes 43969812 3561 70852669
chr19 43973379 43973385 NFE2 TRANSFAC yes 43969812 3567 70852670
chr19 43973384 43973394 GSC2 JASPAR yes 43969812 3572 70852671
chr19 43973397 43973410 DUXA JASPAR yes 43969812 3585 70852672
chr19 43973416 43973420 H1TF2 TRANSFAC yes 43969812 3604 70852673
chr19 43973416 43973420 NFE TRANSFAC yes 43969812 3604 70852674
chr19 43973416 43973420 SRF TRANSFAC yes 43969812 3604 70852675
chr19 43973418 43973433 LEF1 JASPAR yes 43969812 3606 70852676
chr19 43973419 43973433 TCF7L2 JASPAR yes 43969812 3607 70852677
chr19 43973422 43973428 LEF1 TRANSFAC yes 43969812 3610 70852678
chr19 43973422 43973428 TCF4 TRANSFAC yes 43969812 3610 70852679
chr19 43973435 43973446 FLI1 JASPAR yes 43969812 3623 70852680
chr19 43973436 43973446 GABPA JASPAR yes 43969812 3624 70852681
chr19 43973436 43973449 ELF1 JASPAR yes 43969812 3624 70852682
chr19 43973441 43973456 FOXP1 JASPAR yes 43969812 3629 70852683
chr19 43973442 43973446 NFE TRANSFAC yes 43969812 3630 70852684
chr19 43973445 43973453 FOXO3 JASPAR yes 43969812 3633 70852685
chr19 43973450 43973456 SOX10 JASPAR yes 43969812 3638 70852686
chr19 43973466 43973476 MAX JASPAR yes 43969812 3654 70852687
chr19 43973485 43973492 SPIB JASPAR yes 43969812 3673 70852688
chr19 43973510 43973524 PLAG1 JASPAR yes 43969812 3698 70852689
chr19 43974415 43974759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 43969812 4603 108413136
chr19 43974426 43974433 SPIB JASPAR yes 43969812 4614 70852690
chr19 43974427 43974435 EHF JASPAR yes 43969812 4615 70852691
chr19 43974434 43974439 GATA1 TRANSFAC yes 43969812 4622 70852692
chr19 43974442 43974453 ESRRB JASPAR yes 43969812 4630 70852693
chr19 43974459 43974464 ETS2 TRANSFAC yes 43969812 4647 70852694
chr19 43974469 43974483 RXRB JASPAR yes 43969812 4657 70852695
chr19 43974471 43974483 PKNOX1 JASPAR yes 43969812 4659 70852696
chr19 43974471 43974483 PKNOX2 JASPAR yes 43969812 4659 70852697
chr19 43974471 43974483 TGIF1 JASPAR yes 43969812 4659 70852698
chr19 43974471 43974483 TGIF2 JASPAR yes 43969812 4659 70852699
chr19 43974508 43974512 NFE TRANSFAC yes 43969812 4696 70852700
chr19 43974510 43974786 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 43969812 4698 108413137
chr19 43974535 43974546 FOXP2 JASPAR yes 43969812 4723 70852701
chr19 43974536 43974544 FOXG1 JASPAR yes 43969812 4724 70852702
chr19 43974541 43974545 TEAD2 TRANSFAC yes 43969812 4729 70852703
chr19 43974541 43974546 TBP TRANSFAC yes 43969812 4729 70852704
chr19 43974600 43974610 NKX2-3 JASPAR yes 43969812 4788 70852705
chr19 43974601 43974610 NKX2-8 JASPAR yes 43969812 4789 70852706
chr19 43974608 43974619 USF1 JASPAR yes 43969812 4796 70852707
chr19 43974608 43974619 USF2 JASPAR yes 43969812 4796 70852708
chr19 43974609 43974616 USF2 TRANSFAC yes 43969812 4797 70852709
chr19 43974611 43974616 USF2 TRANSFAC yes 43969812 4799 70852710
chr19 43974614 43974629 JUND JASPAR yes 43969812 4802 70852711
chr19 43974615 43974628 JUN JASPAR yes 43969812 4803 70852712
chr19 43974618 43974631 NR2F1 JASPAR yes 43969812 4806 70852713
chr19 43974619 43974627 CREB1 JASPAR yes 43969812 4807 70852714
chr19 43974620 43974628 NR4A2 JASPAR yes 43969812 4808 70852715
chr19 43974622 43974626 ESR1 TRANSFAC yes 43969812 4810 70852716
chr19 43974622 43974633 USF1 JASPAR yes 43969812 4810 70852717
chr19 43974626 43974636 NFIA JASPAR yes 43969812 4814 70852718
chr19 43974627 43974636 NFIX JASPAR yes 43969812 4815 70852719
chr19 43974628 43974634 NFIC JASPAR yes 43969812 4816 70852720
chr19 43974644 43974665 IRF1 JASPAR yes 43969812 4832 70852721
chr19 43974648 43974663 PRDM1 JASPAR yes 43969812 4836 70852722
chr19 43974648 43974663 STAT2 JASPAR yes 43969812 4836 70852723
chr19 43974650 43974671 IRF1 JASPAR yes 43969812 4838 70852724
chr19 43974653 43974667 IRF7 JASPAR yes 43969812 4841 70852725
chr19 43974662 43974674 PROX1 JASPAR yes 43969812 4850 70852726
chr19 43974671 43974685 BATF3 JASPAR yes 43969812 4859 70852727
chr19 43974691 43974709 RARA JASPAR yes 43969812 4879 70852728
chr19 43974693 43974697 NFE TRANSFAC yes 43969812 4881 70852729
chr19 43974693 43974714 ZNF263 JASPAR yes 43969812 4881 70852730
chr19 43974696 43974710 PLAG1 JASPAR yes 43969812 4884 70852731
chr19 43974696 43974711 NR2C2 JASPAR yes 43969812 4884 70852732
chr19 43974697 43974707 SP1 JASPAR yes 43969812 4885 70852733
chr19 43974698 43974708 SP1 JASPAR yes 43969812 4886 70852734
chr19 43974701 43974711 MZF1 JASPAR yes 43969812 4889 70852735
chr19 43974704 43974710 SP1 TRANSFAC yes 43969812 4892 70852736
chr19 43974704 43974714 SP1 JASPAR yes 43969812 4892 70852737
chr19 43974704 43974725 ZNF263 JASPAR yes 43969812 4892 70852738
chr19 43974713 43974718 SP1 TRANSFAC yes 43969812 4901 70852739
chr19 43974754 43974760 TCF4 TRANSFAC yes 43969812 4942 70852740
chr19 43974776 43974791 LEF1 JASPAR yes 43969812 4964 70852741
chr19 43974777 43974791 TCF7L2 JASPAR yes 43969812 4965 70852742
chr19 43974780 43974801 ZNF263 JASPAR yes 43969812 4968 70852743
chr19 43974803 43974824 IRF1 JASPAR yes 43969812 4991 70852744
chr19 43974804 43974825 IRF1 JASPAR yes 43969812 4992 70852745
chr19 43974805 43974826 IRF1 JASPAR yes 43969812 4993 70852746
chr19 43974806 43974821 FOXP1 JASPAR yes 43969812 4994 70852747
chr19 43974806 43974827 IRF1 JASPAR yes 43969812 4994 70852748
chr19 43974807 43974828 IRF1 JASPAR yes 43969812 4995 70852749
chr19 43974808 43974823 FOXP1 JASPAR yes 43969812 4996 70852750
chr19 43974808 43974829 IRF1 JASPAR yes 43969812 4996 70852751
chr19 43974809 43974824 FOXP1 JASPAR yes 43969812 4997 70852752
chr19 43974809 43974830 IRF1 JASPAR yes 43969812 4997 70852753
chr19 43974810 43974825 FOXP1 JASPAR yes 43969812 4998 70852754
chr19 43974810 43974831 IRF1 JASPAR yes 43969812 4998 70852755
chr19 43974811 43974826 FOXP1 JASPAR yes 43969812 4999 70852756
chr19 43974812 43974827 FOXP1 JASPAR yes 43969812 5000 70852757
SNPs associated with LYPD3[ENSG00000124466.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of LYPD3[ENSG00000124466.8]
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Genomic Location chr19:43964939-43969812[-]
TSS 43969812
Gene Name LYPD3
Ensembl ID ENSG00000124466.8
ENTREZID 27076
Uniprot
O95274
B2RBR3
Protein Name
LY6/PLAUR domain containing 3
Ly6/PLAUR domain-containing protein 3
Expression levels of LYPD3[ENSG00000124466.8]
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