EnhancerDB
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Enhancers that regulate PSD4[ENSG00000125637.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 113818075 113818222 vista32792 113914902 96680
VISTA
chr2 113833589 113848015 enh44861 113914902 66887
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Thyroid Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr2 113835949 113836406 vista32793 113914902 78496
VISTA
chr2 113837856 113838205 vista32794 113914902 76697
VISTA
chr2 113839029 113839680 vista32795 113914902 75222
VISTA
chr2 113840552 113841422 vista32796 113914902 73480
VISTA
chr2 113845910 113846038 vista32797 113914902 68864
VISTA
chr2 113847761 113847860 vista32798 113914902 67042
VISTA
chr2 113854564 113854684 vista32799 113914902 60218
VISTA
chr2 113862706 113863200 vista32800 113914902 51702
VISTA
chr2 113867645 113871795 enh109888 113914902 43107
Stomach
chr2 113869431 113870096 vista32801 113914902 44806
VISTA
chr2 113871504 113872065 vista32802 113914902 42837
VISTA
chr2 113872083 113872583 vista32803 113914902 42319
VISTA
chr2 113876771 113876990 vista32804 113914902 37912
VISTA
chr2 113878049 113885215 enh33582 113914902 29687
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Stomach
chr2 113881199 113882653 vista32805 113914902 32249
VISTA
chr2 113882661 113883329 vista32806 113914902 31573
VISTA
chr2 113889365 113898935 enh48336 113914902 15967
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Blood (T-cell) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
chr2 113901249 113901290 vista32807 113914902 13612
VISTA
chr2 113904385 113909535 enh18823 113914902 5367
Prostate (PC-3) Placenta
chr2 113916006 113916157 vista32808 113914902 1104
VISTA
chr2 113920183 113939895 enh5778 113914902 5281
Liver (HepG2) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Blood (GM12878) Placenta Thyroid Adrenal Blood (Karpas-422) Pancreas Thymus Stomach
chr2 113924878 113925123 vista32809 113914902 9976
VISTA
chr2 113945498 113945734 vista32810 113914902 30596
VISTA
chr2 113958121 113958315 vista32811 113914902 43219
VISTA
chr2 113964945 113972675 enh18824 113914902 50043
Cervix (HeLa-S3) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Uterus Heart
chr2 113969874 113970195 vista32812 113914902 54972
VISTA
chr2 113984665 113992785 enh65317 113914902 69763
Muscle (Myoblast) Stomach Heart
chr2 113993285 113997435 enh18825 113914902 78383
Placenta
chr2 114004643 114017355 enh33583 113914902 89741
Blood (T-cell) Astrocyte Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Spleen Thymus
Transcript facotrs that regulate PSD4[ENSG00000125637.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 113916044 113916054 RORA JASPAR yes 113914902 1142 22116514
chr2 113916045 113916056 ESRRA JASPAR yes 113914902 1143 22116515
chr2 113916045 113916056 ESRRB JASPAR yes 113914902 1143 22116516
chr2 113916047 113916055 NR4A2 JASPAR yes 113914902 1145 22116517
chr2 113916049 113916053 ESR1 TRANSFAC yes 113914902 1147 22116518
chr2 113916070 113916079 NFIX JASPAR yes 113914902 1168 22116519
chr2 113916070 113916080 NFIA JASPAR yes 113914902 1168 22116520
chr2 113916072 113916078 NFIC JASPAR yes 113914902 1170 22116521
chr2 113916073 113916087 JUN JASPAR yes 113914902 1171 22116522
chr2 113916076 113916087 FOSL2 JASPAR yes 113914902 1174 22116523
chr2 113916076 113916087 JUNB JASPAR yes 113914902 1174 22116524
chr2 113916077 113916088 FOS JASPAR yes 113914902 1175 22116525
chr2 113916077 113916088 JUND JASPAR yes 113914902 1175 22116526
chr2 113916077 113916088 NFE2 JASPAR yes 113914902 1175 22116527
chr2 113916078 113916092 JUN JASPAR yes 113914902 1176 22116528
chr2 113916079 113916090 BATF JASPAR yes 113914902 1177 22116529
chr2 113916105 113916116 FLI1 JASPAR yes 113914902 1203 22116530
chr2 113916106 113916110 YY1 TRANSFAC yes 113914902 1204 22116531
chr2 113916106 113916116 ERF JASPAR yes 113914902 1204 22116532
chr2 113916106 113916116 ERG JASPAR yes 113914902 1204 22116533
chr2 113916106 113916116 ETS1 JASPAR yes 113914902 1204 22116534
chr2 113916106 113916116 FEV JASPAR yes 113914902 1204 22116535
chr2 113916106 113916116 FLI1 JASPAR yes 113914902 1204 22116536
chr2 113916106 113916117 ETV2 JASPAR yes 113914902 1204 22116537
chr2 113916106 113916119 ELF1 JASPAR yes 113914902 1204 22116538
chr2 113916107 113916115 FEV JASPAR yes 113914902 1205 22116539
chr2 113916126 113916130 TEAD2 TRANSFAC yes 113914902 1224 22116540
chr2 113916126 113916131 TBP TRANSFAC yes 113914902 1224 22116541
chr2 113916132 113916143 NFE2 JASPAR yes 113914902 1230 22116542
chr2 113916133 113916142 JDP2 JASPAR yes 113914902 1231 22116543
chr2 113916136 113916151 HNF1A JASPAR yes 113914902 1234 22116544
chr2 113916137 113916150 HNF1B JASPAR yes 113914902 1235 22116545
chr2 113916146 113916157 BATF JASPAR yes 113914902 1244 22116546
SNPs associated with PSD4[ENSG00000125637.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 113939763 rs4849166 T A 0 Esophagus 1.98119e-09 5969442
chr2 113934085 rs4849160 A G 0 Ovary 0.0114848 5969367
chr2 113992800 rs397778746 TCC T 25827 Adrenal 1.36805e-06 5969675
Details of PSD4[ENSG00000125637.11]
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Genomic Location chr2:113914902-113966973[+]
TSS 113914902
Gene Name PSD4
Ensembl ID ENSG00000125637.11
ENTREZID 23550
Uniprot
Q8NDX1
Protein Name
isoform CRA_b
PH and SEC7 domain-containing protein 4
Pleckstrin and Sec7 domain containing 4
Expression levels of PSD4[ENSG00000125637.11]
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