EnhancerDB
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Enhancers that regulate PODXL[ENSG00000128567.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr7 131142051 131146349 enh86697 131242976 96627
Colon (HCT116)
chr7 131152589 131152603 vista57342 131242976 90373
VISTA
chr7 131163785 131170615 enh10048 131242976 72361
Astrocyte Peripheral Blood (MM.1S) Brain (SK-N-MC) Blood (Karpas-422)
chr7 131166569 131166943 vista57343 131242976 76033
VISTA
chr7 131180305 131184455 enh110394 131242976 58521
Stomach
chr7 131194629 131200697 enh46463 131242976 42279
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Ovary Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr7 131201625 131216252 enh66464 131242976 26724
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Ovary Stomach Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
chr7 131219205 131234375 enh24522 131242976 8601
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr7 131239359 131239620 vista57344 131242976 3356
VISTA
chr7 131264005 131274935 enh56488 131242976 21029
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Uterus Heart
chr7 131271012 131271384 vista57345 131242976 28036
VISTA
chr7 131283385 131295159 enh46464 131242976 40409
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr7 131289586 131289917 vista57346 131242976 46610
VISTA
chr7 131290113 131290454 vista57347 131242976 47137
VISTA
chr7 131301365 131321135 enh40596 131242976 58389
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Lung (PC-9) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Breast Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr7 131304608 131304982 vista57348 131242976 61632
VISTA
chr7 131307786 131308102 vista57349 131242976 64810
VISTA
chr7 131314351 131314532 vista57350 131242976 71375
VISTA
chr7 131321985 131326135 enh109144 131242976 79009
Lung (PC-9)
chr7 131327963 131328346 vista57351 131242976 84987
VISTA
chr7 131330325 131341854 enh56489 131242976 87349
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate PODXL[ENSG00000128567.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr7 131239394 131239398 YY1 TRANSFAC yes 131242976 3578 26134785
chr7 131239394 131239405 ETV2 JASPAR yes 131242976 3571 26134786
chr7 131239394 131239412 SRF JASPAR yes 131242976 3564 26134787
chr7 131239395 131239403 FEV JASPAR yes 131242976 3573 26134788
chr7 131239396 131239414 SRF JASPAR yes 131242976 3562 26134789
chr7 131239397 131239402 ETS2 TRANSFAC yes 131242976 3574 26134790
chr7 131239403 131239412 THAP1 JASPAR yes 131242976 3564 26134791
chr7 131239406 131239410 LFA1 TRANSFAC yes 131242976 3566 26134792
chr7 131239415 131239421 MAZ TRANSFAC yes 131242976 3555 26134793
chr7 131239426 131239442 ZNF143 JASPAR yes 131242976 3534 26134794
chr7 131239451 131239456 ETS2 TRANSFAC yes 131242976 3520 26134795
chr7 131239451 131239459 EHF JASPAR yes 131242976 3517 26134796
chr7 131239457 131239468 FOSL2 JASPAR yes 131242976 3508 26134797
chr7 131239469 131239474 ETS2 TRANSFAC yes 131242976 3502 26134798
chr7 131239490 131239503 NFKB2 JASPAR yes 131242976 3473 26134799
chr7 131239496 131239499 MYB TRANSFAC yes 131242976 3477 26134800
chr7 131239509 131239520 NFE2L2 JASPAR yes 131242976 3456 26134801
chr7 131239522 131239527 SP1 TRANSFAC yes 131242976 3449 26134802
chr7 131239527 131239542 HSF1 JASPAR yes 131242976 3434 26134803
chr7 131239592 131239596 NFE TRANSFAC yes 131242976 3380 26134804
chr7 131239594 131239605 EBF1 JASPAR yes 131242976 3371 26134805
chr7 131239595 131239601 MZF1 JASPAR yes 131242976 3375 26134806
SNPs associated with PODXL[ENSG00000128567.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr7 131006229 rs1813742 C T 178792 Esophagus 0.00237138 10094595
chr7 131340667 rs6943605 C T 97691 Esophagus 0.289587 10096990
chr7 130697855 rs77152576 T C 487166 Esophagus 0.0219796 10091722
chr7 131225460 rs145645706 G A 0 Pancreas 0.297942 10095800
chr7 130775266 rs2398733 G A 409755 Adrenal 0.155576 10092655
Details of PODXL[ENSG00000128567.12]
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Genomic Location chr7:131185021-131242976[-]
TSS 131242976
Gene Name PODXL
Ensembl ID ENSG00000128567.12
ENTREZID 5420
Uniprot
Q96N83
O00592
Protein Name
Podocalyxin
Expression levels of PODXL[ENSG00000128567.12]
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