EnhancerDB
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Enhancers that regulate RTN4IP1[ENSG00000130347.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 106976625 106984755 enh23461 107077373 92618
Cervix (HeLa-S3) Blood (GM12878) Placenta Lung (PC-9) Blood (T-cell)
chr6 106992285 106999195 enh9275 107077373 78178
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast
chr6 107001745 107005895 enh109057 107077373 71478
Lung (PC-9)
chr6 107014040 107014053 vista53006 107077373 63320
VISTA
chr6 107020558 107026595 enh39314 107077373 50778
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr6 107022555 107023128 vista53007 107077373 54245
VISTA
chr6 107047078 107047343 vista53008 107077373 30030
VISTA
chr6 107053445 107065172 enh9276 107077373 12201
Blood (OCI-LY7) Neural Stem Cells (H9) Blood (Karpas-422)
chr6 107082485 107087867 enh9277 107077373 5112
Blood (Karpas-422) Blood (GM12878)
chr6 107094925 107100295 enh9278 107077373 17552
Blood (Karpas-422)
chr6 107104335 107110055 enh9279 107077373 26962
Blood (OCI-LY7) Placenta Neural Stem Cells (H9) Blood (Karpas-422)
chr6 107116225 107123155 enh9280 107077373 38852
Blood (Karpas-422)
chr6 107123177 107127503 enh61411 107077373 45804
Blood (OCI-LY7)
chr6 107131805 107146635 enh9281 107077373 54432
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Stomach Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 107146965 107155258 enh9282 107077373 69592
Liver (HepG2) Blood (OCI-LY7) Stomach Blood (Karpas-422) Pancreas Epithelial (MCF-7)
chr6 107150270 107150783 vista53009 107077373 72897
VISTA
chr6 107161265 107207435 enh9283 107077373 83892
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate RTN4IP1[ENSG00000130347.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RTN4IP1[ENSG00000130347.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 107084711 rs1419055 T C 7338 Esophagus 0.00934349 9235957
chr6 107002993 rs9398095 T A 15910 Pancreas 0.0526052 9235540
chr6 106966575 rs137973571 G A 52328 Breast 0.0862409 9235216
chr6 107087640 rs3804343 T C 10267 Spleen 0.320581 9235997
chr6 106349050 rs35276192 T TTTG 669853 Ovary 0.214042 9230418
chr6 106785872 rs201194247 G GT 233031 Uterus 0.393912 9233290
chr6 107236494 rs7775079 G A 159121 Thyroid 0.0386038 9237653
chr6 107273794 rs13212390 C T 196421 Liver 0.899754 9238078
chr6 107282855 rs4946801 G A 205482 Stomach 0.142938 9238200
Details of RTN4IP1[ENSG00000130347.8]
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Genomic Location chr6:107018903-107077373[-]
TSS 107077373
Gene Name RTN4IP1
Ensembl ID ENSG00000130347.8
ENTREZID 84816
Uniprot
Q8WWV3
Protein Name
mitochondrial
Reticulon-4-interacting protein 1
Expression levels of RTN4IP1[ENSG00000130347.8]
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