EnhancerDB
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Enhancers that regulate SPOCD1[ENSG00000134668.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 32174610 32186592 enh11719 32281652 95060
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr1 32187327 32191869 enh89475 32281652 89783
Prostate (RWPE1)
chr1 32208225 32220903 enh200 32281652 60749
Large Intestine Bone (Osteoblast) Blood (OCI-LY7) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Blood (T-cell) Heart
chr1 32224585 32228735 enh11720 32281652 52917
Placenta
chr1 32227408 32227911 vista1087 32281652 53741
VISTA
chr1 32235645 32243035 enh11721 32281652 38617
Placenta Thymus
chr1 32237691 32238692 vista1088 32281652 42960
VISTA
chr1 32244783 32255875 enh201 32281652 25777
Bone Marrow (K562) Brain (SK-N-SH) Blood (OCI-LY7) Blood (Karpas-422) Pancreas (Panc1) Uterus
chr1 32250836 32250955 vista1089 32281652 30697
VISTA
chr1 32253647 32254040 vista1090 32281652 27612
VISTA
chr1 32263216 32263220 vista1091 32281652 18432
VISTA
chr1 32290565 32302395 enh26612 32281652 8913
Bone Marrow (K562) Blood (T-cell) Astrocyte Bone (Osteoblast) Pancreas Muscle (Myotube) Thymus Stomach
chr1 32306525 32316915 enh58086 32281652 24873
Skin (Keratinocyte) Prostate (RWPE1) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Pancreas Blood (T-cell) Epithelial (MCF-7)
chr1 32314121 32314597 vista1092 32281652 32469
VISTA
chr1 32318785 32323408 enh42925 32281652 37133
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Bone (Osteoblast) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr1 32333785 32349455 enh202 32281652 52133
Liver (HepG2) Large Intestine Blood (T-cell) Blood (OCI-LY7) Stomach Thyroid Blood (Karpas-422) Pancreas Thymus Epithelial (MCF-7)
chr1 32347360 32347436 vista1093 32281652 65708
VISTA
chr1 32350585 32359268 enh203 32281652 68933
Large Intestine Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Blood (T-cell)
chr1 32354934 32355150 vista1094 32281652 73282
VISTA
chr1 32360725 32365515 enh204 32281652 79073
Prostate (RWPE1) Prostate (PC-3) Cervix (HeLa-S3) Blood (Karpas-422)
chr1 32365536 32372655 enh205 32281652 83884
Blood (OCI-LY7) Cervix (HeLa-S3) Thymus Blood (Karpas-422)
Transcript facotrs that regulate SPOCD1[ENSG00000134668.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SPOCD1[ENSG00000134668.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 32292468 rs6695777 G A 10816 Esophagus 3.84568e-07 214873
chr1 32342268 rs687234 G A 60616 Esophagus 0.210821 215306
chr1 31284243 rs11804295 A G 971780 Breast 0.328366 206563
chr1 33104147 rs114889708 T C 822495 Spleen 0.128485 219166
chr1 32314400 rs1536131 A G 32748 Thyroid 3.17203e-07 215075
chr1 31317233 rs397704414 A AC 938790 Lung 0.0217473 206902
Details of SPOCD1[ENSG00000134668.8]
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Genomic Location chr1:32256023-32281652[-]
TSS 32281652
Gene Name SPOCD1
Ensembl ID ENSG00000134668.8
ENTREZID 90853
Uniprot
Q6ZMY3
Protein Name
SPOC domain-containing protein 1
SPOCD1 protein
Expression levels of SPOCD1[ENSG00000134668.8]
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