EnhancerDB
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Enhancers that regulate CCDC64[ENSG00000135127.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 120337885 120342035 enh90985 120427673 85638
Bone Marrow (K562)
chr12 120347153 120354735 enh15041 120427673 72938
Placenta Bone (Osteoblast) Lung (PC-9)
chr12 120372601 120372782 vista15100 120427673 54891
VISTA
chr12 120376140 120382542 enh43840 120427673 45131
Prostate (PC-3) Muscle (Myotube) Lung (PC-9) Epithelial (MCF-7)
chr12 120408925 120414390 enh62316 120427673 13283
Esophagus Lung (PC-9) Epithelial (MCF-7)
chr12 120426531 120426889 vista15101 120427673 784
VISTA
chr12 120433844 120433899 vista15102 120427673 6171
VISTA
chr12 120442165 120460015 enh2631 120427673 14492
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Blood (GM12878) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr12 120445148 120445418 vista15103 120427673 17475
VISTA
chr12 120450063 120450486 vista15104 120427673 22390
VISTA
chr12 120451614 120452059 vista15105 120427673 23941
VISTA
chr12 120453080 120453507 vista15106 120427673 25407
VISTA
chr12 120468885 120488315 enh2632 120427673 41212
Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Esophagus Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell)
chr12 120486152 120486402 vista15107 120427673 58479
VISTA
chr12 120490249 120495785 enh58485 120427673 62576
Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung (PC-9)
chr12 120503005 120507855 enh2633 120427673 75332
Thyroid Blood (Karpas-422)
chr12 120510965 120518164 enh86150 120427673 83292
Colon (HCT116) Blood (T-cell)
chr12 120516744 120516801 vista15108 120427673 89071
VISTA
chr12 120520214 120527503 enh2634 120427673 92541
Bone Marrow (K562) Cervix (HeLa-S3) Blood (T-cell) Blood (OCI-LY7) Placenta Uterus Blood (Karpas-422) Pancreas (Panc1) Neural Stem Cells (H9) Thymus
chr12 120524802 120525368 vista15109 120427673 97129
VISTA
Transcript facotrs that regulate CCDC64[ENSG00000135127.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 120426042 120426612 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 120427673 1061 108062502
chr12 120426123 120426533 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 120427673 1140 108062503
chr12 120426172 120426782 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 891 108062504
chr12 120426174 120426678 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 120427673 995 108062505
chr12 120426189 120426674 CTCF UCSC Txn Factor no Conserved 120427673 999 108062506
chr12 120426192 120426581 ZNF263 UCSC Txn Factor no Conserved 120427673 1092 108062507
chr12 120426193 120426683 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 990 108062508
chr12 120426217 120426537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 1136 108062509
chr12 120426247 120426703 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 970 108062510
chr12 120426279 120426549 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 1124 108062511
chr12 120426286 120426576 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 120427673 1097 108062512
chr12 120426291 120426551 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 1122 108062513
chr12 120426348 120426598 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 1075 108062514
chr12 120426399 120426863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 810 108062515
chr12 120426416 120426800 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 873 108062516
chr12 120426417 120426787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 886 108062517
chr12 120426418 120426738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 935 108062518
chr12 120426425 120427035 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 638 108062519
chr12 120426488 120427093 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 120427673 580 108062520
chr12 120426488 120427187 E2F1 UCSC Txn Factor no Conserved 120427673 486 108062521
chr12 120426488 120427187 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 120427673 486 108062522
chr12 120426495 120427155 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 518 108062523
chr12 120426503 120426939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 734 108062524
chr12 120426524 120427044 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 629 108062525
chr12 120426531 120426771 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 120427673 902 108062526
chr12 120426549 120426859 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 120427673 814 108062527
chr12 120426560 120426930 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 743 108062528
chr12 120426568 120427084 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 589 108062529
chr12 120426570 120426577 SP1 TRANSFAC yes 120427673 1096 82486609
chr12 120426570 120426580 SP1 JASPAR yes 120427673 1093 82486610
chr12 120426570 120426834 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 839 108062530
chr12 120426571 120426579 SP1 TRANSFAC yes 120427673 1094 82486611
chr12 120426571 120426580 SP1 TRANSFAC yes 120427673 1093 82486612
chr12 120426572 120426577 SP1 TRANSFAC yes 120427673 1096 82486613
chr12 120426573 120426578 SP1 TRANSFAC yes 120427673 1095 82486614
chr12 120426573 120426579 SP1 TRANSFAC yes 120427673 1094 82486615
chr12 120426576 120426581 SP1 TRANSFAC yes 120427673 1092 82486616
chr12 120426588 120427118 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 555 108062531
chr12 120426594 120426609 ZIC4 JASPAR yes 120427673 1064 82486617
chr12 120426595 120426609 ZIC1 JASPAR yes 120427673 1064 82486618
chr12 120426601 120426606 SP1 TRANSFAC yes 120427673 1067 82486619
chr12 120426602 120426614 ZBTB7C JASPAR yes 120427673 1059 82486620
chr12 120426603 120426615 ZBTB7A JASPAR yes 120427673 1058 82486621
chr12 120426605 120426610 SP1 TRANSFAC yes 120427673 1063 82486622
chr12 120426606 120426616 SP1 JASPAR yes 120427673 1057 82486623
chr12 120426606 120427002 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 671 108062532
chr12 120426607 120426616 SP1 TRANSFAC yes 120427673 1057 82486624
chr12 120426608 120426613 SP1 TRANSFAC yes 120427673 1060 82486625
chr12 120426609 120426614 SP1 TRANSFAC yes 120427673 1059 82486626
chr12 120426609 120426615 SP1 TRANSFAC yes 120427673 1058 82486627
chr12 120426612 120426617 SP1 TRANSFAC yes 120427673 1056 82486628
chr12 120426618 120427018 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 120427673 655 108062533
chr12 120426629 120426989 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 684 108062534
chr12 120426666 120426916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 757 108062535
chr12 120426671 120426961 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 712 108062536
chr12 120426678 120426942 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 731 108062537
chr12 120426683 120427139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 534 108062538
chr12 120426684 120426927 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 746 108062539
chr12 120426684 120426961 EGR1 UCSC Txn Factor no Conserved 120427673 712 108062540
chr12 120426685 120426961 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 712 108062541
chr12 120426689 120427059 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 614 108062542
chr12 120426691 120427061 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 120427673 612 108062543
chr12 120426695 120426955 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 718 108062544
chr12 120426696 120426946 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 727 108062545
chr12 120426702 120426973 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 700 108062546
chr12 120426708 120426814 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 859 108062547
chr12 120426709 120426721 TFAP2A JASPAR yes 120427673 952 82486629
chr12 120426712 120426996 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 677 108062548
chr12 120426715 120426721 SP1 TRANSFAC yes 120427673 952 82486630
chr12 120426716 120426721 SP1 TRANSFAC yes 120427673 952 82486631
chr12 120426722 120426866 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 807 108062549
chr12 120426723 120427031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 120427673 642 108062550
chr12 120426723 120427447 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 226 108062551
chr12 120426732 120427056 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 617 108062552
chr12 120426737 120426997 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 676 108062553
chr12 120426743 120427047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 626 108062554
chr12 120426745 120426757 INSM1 JASPAR yes 120427673 916 82486632
chr12 120426745 120426757 TFAP2A JASPAR yes 120427673 916 82486633
chr12 120426747 120426991 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 682 108062555
chr12 120426771 120426941 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 732 108062556
chr12 120426773 120426963 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 120427673 710 108062557
chr12 120426773 120427029 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 120427673 644 108062558
chr12 120426785 120427954 POLR2A UCSC Txn Factor no Conserved 120427673 281 108062559
chr12 120426788 120426989 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 684 108062560
chr12 120426804 120426818 ZIC1 JASPAR yes 120427673 855 82486634
chr12 120426808 120427088 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 120427673 585 108062561
chr12 120426810 120426815 SP1 TRANSFAC yes 120427673 858 82486635
chr12 120426814 120427124 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 549 108062562
chr12 120426818 120426829 NRF1 JASPAR yes 120427673 844 82486636
chr12 120426818 120427000 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 673 108062563
chr12 120426823 120426838 ZIC4 JASPAR yes 120427673 835 82486637
chr12 120426823 120427287 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 120427673 386 108062564
chr12 120426824 120427024 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 120427673 649 108062565
chr12 120426825 120426830 SP1 TRANSFAC yes 120427673 843 82486638
chr12 120426825 120426834 THAP1 JASPAR yes 120427673 839 82486639
chr12 120426826 120426839 TFAP2A JASPAR yes 120427673 834 82486640
chr12 120426826 120426839 TFAP2B JASPAR yes 120427673 834 82486641
chr12 120426826 120426839 TFAP2C JASPAR yes 120427673 834 82486642
chr12 120426834 120427270 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 403 108062566
chr12 120426843 120426941 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 120427673 732 108062567
chr12 120426845 120427469 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 120427673 204 108062568
chr12 120426859 120427299 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 120427673 374 108062569
chr12 120426861 120426872 NRF1 JASPAR yes 120427673 801 82486643
chr12 120426871 120426876 USF2 TRANSFAC yes 120427673 797 82486644
chr12 120426873 120427149 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 120427673 524 108062570
SNPs associated with CCDC64[ENSG00000135127.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 119846639 rs67388197 AC A 581034 Esophagus 0.116011 2941712
chr12 121181369 rs11065243 G T 649071 Heart 0.336914 2947581
chr12 120684870 rs71656282 AAAG A 152572 Heart 0.180683 2944806
chr12 121363727 rs146590204 C CGATTTTCA 831429 Ovary 0.227636 2949025
chr12 119641012 rs11064710 T G 786661 Uterus 0.337047 2940815
chr12 120377936 rs150612571 AG A 49737 Lung 0.904459 2943194
Details of CCDC64[ENSG00000135127.7]
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Genomic Location chr12:120427673-120532298[+]
TSS 120427673
Gene Name CCDC64
Ensembl ID ENSG00000135127.7
ENTREZID
Uniprot
Protein Name
BICD family-like cargo adapter 1
Expression levels of CCDC64[ENSG00000135127.7]
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