EnhancerDB
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Enhancers that regulate TFAP2A[ENSG00000137203.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 10296185 10320275 enh22999 10419892 99617
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 10321685 10325835 enh23000 10419892 94057
Placenta
chr6 10328805 10334595 enh23001 10419892 85297
Placenta
chr6 10341625 10345775 enh23002 10419892 74117
Placenta
chr6 10345805 10357875 enh23003 10419892 62017
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
chr6 10355646 10355875 vista50765 10419892 64017
VISTA
chr6 10362069 10366537 enh59588 10419892 53355
Skin (Keratinocyte)
chr6 10368193 10376645 enh23004 10419892 43247
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Placenta Pancreas (Panc1) Muscle (Myotube)
chr6 10378885 10383035 enh23005 10419892 36857
Placenta
chr6 10383571 10383981 vista50766 10419892 35911
VISTA
chr6 10393875 10395072 vista1413 10419892 24820
VISTA
chr6 10403752 10404250 vista50767 10419892 15642
VISTA
chr6 10407432 10410045 vista1414 10419892 9847
VISTA
chr6 10407698 10407754 vista50768 10419892 12138
VISTA
chr6 10427776 10437827 enh23006 10419892 7884
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116)
chr6 10439199 10444095 enh23007 10419892 19307
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
chr6 10441526 10441791 vista50769 10419892 21634
VISTA
chr6 10448065 10456095 enh23008 10419892 28173
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast)
chr6 10458287 10458428 vista50770 10419892 38395
VISTA
chr6 10461205 10468210 enh23009 10419892 41313
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Lung (PC-9) Neural Stem Cells (H9)
chr6 10469785 10473935 enh23010 10419892 49893
Placenta
chr6 10476739 10484515 enh90361 10419892 56847
Prostate (RWPE1) Lung (PC-9)
chr6 10508796 10514040 enh46070 10419892 88904
Muscle (Myotube) Stomach
chr6 10516025 10521395 enh23011 10419892 96133
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Muscle (A673) Placenta Lung (PC-9) Neural Stem Cells (H9)
Transcript facotrs that regulate TFAP2A[ENSG00000137203.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 10409545 10416429 EZH2 UCSC Txn Factor no Conserved 10419892 3463 107693904
SNPs associated with TFAP2A[ENSG00000137203.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 10575905 rs55890245 CT C 156013 Esophagus 0.300659 8825328
chr6 9769466 rs80294931 C G 623953 Esophagus 0.045769 8820277
chr6 11140827 rs145360480 AC A 720935 Heart 0.207046 8827977
chr6 10348704 rs147333044 G C 44715 Heart 0.1977 8822928
chr6 10413057 rs6456450 T C 0 Pancreas 0.0522463 8823438
chr6 10573583 rs3837000 A ATTGTTG 153691 Breast 0.299222 8825272
chr6 10415001 rs654340 T C 0 Spleen 0.064236 8823461
chr6 10411395 rs3798691 C G 0 Thyroid 0.000156706 8823418
chr6 10413057 rs6456450 T C 0 Stomach 0.20645 8823438
Details of TFAP2A[ENSG00000137203.6]
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Genomic Location chr6:10393419-10419892[-]
TSS 10419892
Gene Name TFAP2A
Ensembl ID ENSG00000137203.6
ENTREZID 7020
Uniprot
P05549
Protein Name
Transcription factor AP-2 alpha
Transcription factor AP-2-alpha
Expression levels of TFAP2A[ENSG00000137203.6]
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