EnhancerDB
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Enhancers that regulate STRA6[ENSG00000137868.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr15 74403045 74407255 enh96603 74504608 97353
Epithelial (MCF-7)
chr15 74412993 74413248 vista20684 74504608 91360
VISTA
chr15 74430867 74438955 enh68967 74504608 65653
Neural Stem Cells (H9) Epithelial (MCF-7)
chr15 74445663 74453714 enh44155 74504608 50894
Heart Brain (SK-N-SH) Blood (GM12878) Muscle (Myotube) Uterus Stomach
chr15 74447522 74447606 vista20685 74504608 57002
VISTA
chr15 74464511 74464760 vista20686 74504608 39848
VISTA
chr15 74466705 74470855 enh16316 74504608 33753
Placenta
chr15 74482241 74492995 enh62499 74504608 11613
Esophagus Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7)
chr15 74492868 74493054 vista20687 74504608 11554
VISTA
chr15 74493587 74493665 vista20688 74504608 10943
VISTA
chr15 74495505 74499815 enh101444 74504608 4793
Thyroid
chr15 74513205 74524215 enh47889 74504608 8597
Muscle (A673) Thymus Brain (SK-N-MC)
chr15 74526525 74535764 enh62500 74504608 21917
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Bone (Osteoblast) Stomach Muscle (A673) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Heart
chr15 74536866 74536980 vista20689 74504608 32258
VISTA
chr15 74540685 74548115 enh16317 74504608 36077
Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Heart
chr15 74549145 74554705 enh3714 74504608 44537
Muscle (A673) Brain (SK-N-SH) Blood (Karpas-422)
chr15 74568023 74568032 vista20690 74504608 63415
VISTA
chr15 74580325 74588025 enh31504 74504608 75717
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Astrocyte Blood (GM12878)
chr15 74594694 74599314 enh115593 74504608 90086
Brain (SK-N-SH)
chr15 74602185 74621395 enh16318 74504608 97577
Bone Marrow (K562) Ovary Blood (T-cell) Astrocyte Stomach Placenta Pancreas Uterus Thymus Heart
Transcript facotrs that regulate STRA6[ENSG00000137868.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr15 74499620 74499634 PLAG1 JASPAR yes 74504608 4974 24639017
chr15 74499657 74499672 MAFK JASPAR yes 74504608 4936 24639018
chr15 74499669 74499673 YY1 TRANSFAC yes 74504608 4935 24639019
chr15 74499717 74499729 INSM1 JASPAR yes 74504608 4879 24639020
chr15 74499744 74499747 MYB TRANSFAC yes 74504608 4861 24639021
chr15 74499790 74499802 IRF1 JASPAR yes 74504608 4806 24639022
SNPs associated with STRA6[ENSG00000137868.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr15 74518917 rs62003668 C G 14309 Esophagus 0.223828 4088560
chr15 75490715 rs73437064 T C 986107 Esophagus 0.0929223 4094779
chr15 75487844 rs902482 C G 983236 Spleen 0.257131 4094748
chr15 74250427 rs12907105 G C 221380 Uterus 0.331357 4086882
chr15 74467796 rs11854957 C A,T 4011 Thyroid 0.192096 4088253
chr15 74213151 rs56116666 G A 258656 Adrenal 0.299103 4086577
Details of STRA6[ENSG00000137868.14]
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Genomic Location chr15:74471807-74504608[-]
TSS 74504608
Gene Name STRA6
Ensembl ID ENSG00000137868.14
ENTREZID 64220
Uniprot
Q9BX79
B3KPB8
Protein Name
Alternative protein STRA6
Stimulated by retinoic acid gene 6 protein homolog
Expression levels of STRA6[ENSG00000137868.14]
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