EnhancerDB
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Enhancers that regulate ATRAID[ENSG00000138085.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 27335805 27339955 enh76226 27434895 94940
Muscle (A673)
chr2 27382505 27396655 enh5376 27434895 38240
Liver (HepG2) Ovary Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Uterus Stomach
chr2 27397765 27422095 enh5377 27434895 12800
Liver (HepG2) Brain (SK-N-MC) Liver Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Uterus Stomach
chr2 27432989 27433207 vista30773 27434895 1688
VISTA
chr2 27470068 27475335 enh60791 27434895 35173
Bone Marrow (K562) Ovary Blood (OCI-LY7)
chr2 27492605 27496755 enh65244 27434895 57710
Heart
chr2 27493313 27493366 vista30774 27434895 58418
VISTA
chr2 27511076 27518535 enh33153 27434895 76181
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Esophagus Astrocyte Blood (OCI-LY7) Stomach Colon (HCT116) Lung (PC-9) Heart
Transcript facotrs that regulate ATRAID[ENSG00000138085.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 27432778 27433248 GATA3 UCSC Txn Factor no Conserved 27434895 1647 108431516
chr2 27433034 27433044 NFKB1 JASPAR yes 27434895 1851 22021985
chr2 27433036 27433047 ELF5 JASPAR yes 27434895 1848 22021986
chr2 27433036 27433048 EHF JASPAR yes 27434895 1847 22021987
chr2 27433036 27433048 ELF1 JASPAR yes 27434895 1847 22021988
chr2 27433036 27433048 ELF4 JASPAR yes 27434895 1847 22021989
chr2 27433036 27433049 ELF1 JASPAR yes 27434895 1846 22021990
chr2 27433036 27433050 SPIC JASPAR yes 27434895 1845 22021991
chr2 27433037 27433044 SPI1 JASPAR yes 27434895 1851 22021992
chr2 27433037 27433045 EHF JASPAR yes 27434895 1850 22021993
chr2 27433037 27433045 FEV JASPAR yes 27434895 1850 22021994
chr2 27433052 27433065 POU2F2 JASPAR yes 27434895 1830 22021995
chr2 27433052 27433066 POU1F1 JASPAR yes 27434895 1829 22021996
chr2 27433053 27433065 POU3F1 JASPAR yes 27434895 1830 22021997
chr2 27433053 27433066 POU3F3 JASPAR yes 27434895 1829 22021998
chr2 27433054 27433058 YY1 TRANSFAC yes 27434895 1837 22021999
chr2 27433054 27433066 POU2F1 JASPAR yes 27434895 1829 22022000
chr2 27433055 27433062 POU2F1 TRANSFAC yes 27434895 1833 22022001
chr2 27433055 27433062 POU2F2C TRANSFAC yes 27434895 1833 22022002
chr2 27433055 27433062 POU2F2 TRANSFAC yes 27434895 1833 22022003
chr2 27433055 27433064 POU3F4 JASPAR yes 27434895 1831 22022004
chr2 27433055 27433064 POU5F1B JASPAR yes 27434895 1831 22022005
chr2 27433056 27433068 PBX1 JASPAR yes 27434895 1827 22022006
chr2 27433057 27433071 POU4F1 JASPAR yes 27434895 1824 22022007
chr2 27433070 27433081 NFKB1 JASPAR yes 27434895 1814 22022008
chr2 27433070 27433083 NFKB1 JASPAR yes 27434895 1812 22022009
chr2 27433071 27433081 NFKB1 JASPAR yes 27434895 1814 22022010
chr2 27433084 27433090 YY1 JASPAR yes 27434895 1805 22022011
chr2 27433085 27433095 SREBF1 JASPAR yes 27434895 1800 22022012
chr2 27433094 27433109 TFAP2A JASPAR yes 27434895 1786 22022013
chr2 27433094 27433109 TFAP2C JASPAR yes 27434895 1786 22022014
chr2 27433097 27433108 EBF1 JASPAR yes 27434895 1787 22022015
chr2 27433097 27433108 TFAP2A JASPAR yes 27434895 1787 22022016
chr2 27433097 27433108 TFAP2B JASPAR yes 27434895 1787 22022017
chr2 27433097 27433108 TFAP2C JASPAR yes 27434895 1787 22022018
chr2 27433097 27433109 TFAP2C JASPAR yes 27434895 1786 22022019
chr2 27433098 27433107 TFAP2A JASPAR yes 27434895 1788 22022020
chr2 27433104 27433109 ETS2 TRANSFAC yes 27434895 1786 22022021
chr2 27433112 27433130 NR3C1 JASPAR yes 27434895 1765 22022022
chr2 27433121 27433132 NFE2L2 JASPAR yes 27434895 1763 22022023
chr2 27433165 27433173 FOXO3 JASPAR yes 27434895 1722 22022024
chr2 27433169 27433185 SOX8 JASPAR yes 27434895 1710 22022025
SNPs associated with ATRAID[ENSG00000138085.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 27492674 rs113353646 C T 52628 Esophagus 6.19653e-07 5603020
chr2 27387429 rs2384575 T C 47466 Esophagus 3.52774e-15 5602499
chr2 27387429 rs2384575 T C 47466 Heart 0.000176097 5602499
chr2 27492674 rs113353646 C T 52628 Breast 2.88595e-06 5603020
chr2 27387429 rs2384575 T C 47466 Thyroid 2.64223e-12 5602499
chr2 27400850 rs1978881 C A 34045 Lung 4.81195e-17 5602644
chr2 27387429 rs2384575 T C 47466 Stomach 5.72047e-07 5602499
Details of ATRAID[ENSG00000138085.12]
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Genomic Location chr2:27434895-27440046[+]
TSS 27434895
Gene Name ATRAID
Ensembl ID ENSG00000138085.12
ENTREZID 51374
Uniprot
Q6UW56
Protein Name
All-trans retinoic acid-induced differentiation factor
Expression levels of ATRAID[ENSG00000138085.12]
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