EnhancerDB
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Enhancers that regulate LRRC46[ENSG00000141294.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 45812231 45812436 vista24989 45908993 96557
VISTA
chr17 45813705 45817855 enh107712 45908993 91138
Blood (T-cell)
chr17 45814083 45814467 vista24990 45908993 94526
VISTA
chr17 45814660 45814782 vista24991 45908993 94211
VISTA
chr17 45818522 45818785 vista24992 45908993 90208
VISTA
chr17 45824785 45830475 enh4447 45908993 78518
Blood (Karpas-422)
chr17 45838165 45842315 enh107713 45908993 66678
Blood (T-cell)
chr17 45867525 45867625 vista24993 45908993 41368
VISTA
chr17 45867879 45868153 vista24994 45908993 40840
VISTA
chr17 45883445 45887595 enh109770 45908993 21398
Stomach
chr17 45912445 45917413 enh102569 45908993 3452
Bone (Osteoblast)
chr17 45938065 45965315 enh17194 45908993 29072
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr17 45953013 45953226 vista24995 45908993 44020
VISTA
chr17 45975613 45985635 enh32219 45908993 66620
Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr17 45980057 45980402 vista24996 45908993 71064
VISTA
chr17 45983662 45984115 vista24997 45908993 74669
VISTA
Transcript facotrs that regulate LRRC46[ENSG00000141294.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 45912452 45912463 ESRRA JASPAR yes 45908993 3459 54541591
chr17 45912456 45912460 ESR1 TRANSFAC yes 45908993 3463 54541592
chr17 45912470 45912481 FOXH1 JASPAR yes 45908993 3477 54541593
chr17 45912525 45912528 MYB TRANSFAC yes 45908993 3532 54541594
chr17 45912530 45912536 ZNF354C JASPAR yes 45908993 3537 54541595
chr17 45912530 45912540 MAX JASPAR yes 45908993 3537 54541596
chr17 45912537 45912542 TFAP2A TRANSFAC yes 45908993 3544 54541597
chr17 45912537 45912543 MZF1 JASPAR yes 45908993 3544 54541598
chr17 45912561 45912578 ESR1 JASPAR yes 45908993 3568 54541599
chr17 45912569 45912584 SCRT1 JASPAR yes 45908993 3576 54541600
chr17 45912573 45912579 PTF TRANSFAC yes 45908993 3580 54541601
chr17 45912586 45912596 SREBF1 JASPAR yes 45908993 3593 54541602
chr17 45912586 45912596 SREBF2 JASPAR yes 45908993 3593 54541603
chr17 45912646 45912652 SOX10 JASPAR yes 45908993 3653 54541604
chr17 45912693 45912699 MZF1 JASPAR yes 45908993 3700 54541605
chr17 45912701 45912716 STAT2 JASPAR yes 45908993 3708 54541606
chr17 45912753 45912759 SP1 TRANSFAC yes 45908993 3760 54541607
chr17 45912760 45912769 RUNX2 JASPAR yes 45908993 3767 54541608
chr17 45912788 45912809 ZNF263 JASPAR yes 45908993 3795 54541609
chr17 45912789 45912810 ZNF263 JASPAR yes 45908993 3796 54541610
chr17 45912790 45912795 ETS2 TRANSFAC yes 45908993 3797 54541611
chr17 45912791 45912801 SP1 JASPAR yes 45908993 3798 54541612
chr17 45912791 45912812 ZNF263 JASPAR yes 45908993 3798 54541613
chr17 45912795 45912809 PLAG1 JASPAR yes 45908993 3802 54541614
chr17 45912818 45912823 GATA2 JASPAR yes 45908993 3825 54541615
chr17 45912826 45912838 GRHL1 JASPAR yes 45908993 3833 54541616
chr17 45912827 45912837 TFCP2 JASPAR yes 45908993 3834 54541617
chr17 45912838 45912843 H4TF1 TRANSFAC yes 45908993 3845 54541618
chr17 45912854 45912858 H4TF2 TRANSFAC yes 45908993 3861 54541619
chr17 45912895 45912905 SREBF1 JASPAR yes 45908993 3902 54541620
chr17 45912895 45912905 SREBF2 JASPAR yes 45908993 3902 54541621
chr17 45912904 45912924 PPARG JASPAR yes 45908993 3911 54541622
chr17 45912908 45912919 USF1 JASPAR yes 45908993 3915 54541623
chr17 45912909 45912919 MAX JASPAR yes 45908993 3916 54541624
chr17 45912916 45912922 MZF1 JASPAR yes 45908993 3923 54541625
chr17 45912924 45912928 ESR1 TRANSFAC yes 45908993 3931 54541626
chr17 45912928 45912938 TFAP4 JASPAR yes 45908993 3935 54541627
chr17 45912936 45912951 TFAP2A JASPAR yes 45908993 3943 54541628
chr17 45912939 45912954 TFAP2C JASPAR yes 45908993 3946 54541629
chr17 45912945 45912950 SP1 TRANSFAC yes 45908993 3952 54541630
chr17 45912956 45912967 USF2 JASPAR yes 45908993 3963 54541631
chr17 45912963 45912977 SPIC JASPAR yes 45908993 3970 54541632
chr17 45912976 45912989 ZBTB18 JASPAR yes 45908993 3983 54541633
chr17 45912978 45912988 FIGLA JASPAR yes 45908993 3985 54541634
chr17 45912978 45912988 MSC JASPAR yes 45908993 3985 54541635
chr17 45912978 45912988 TFAP4 JASPAR yes 45908993 3985 54541636
chr17 45912978 45912990 TAL1 JASPAR yes 45908993 3985 54541637
chr17 45912989 45913000 FOS JASPAR yes 45908993 3996 54541638
chr17 45912990 45913001 NFE2L2 JASPAR yes 45908993 3997 54541639
chr17 45912991 45913002 BATF JASPAR yes 45908993 3998 54541640
chr17 45913002 45913023 ZNF263 JASPAR yes 45908993 4009 54541641
chr17 45913012 45913023 FLI1 JASPAR yes 45908993 4019 54541642
chr17 45913014 45913022 EHF JASPAR yes 45908993 4021 54541643
chr17 45913014 45913035 ZNF263 JASPAR yes 45908993 4021 54541644
chr17 45913016 45913021 ETS2 TRANSFAC yes 45908993 4023 54541645
chr17 45913019 45913029 MZF1 JASPAR yes 45908993 4026 54541646
chr17 45913028 45913039 ELK4 JASPAR yes 45908993 4035 54541647
chr17 45913028 45913039 FLI1 JASPAR yes 45908993 4035 54541648
chr17 45913029 45913039 GABPA JASPAR yes 45908993 4036 54541649
chr17 45913029 45913042 ELF1 JASPAR yes 45908993 4036 54541650
chr17 45913035 45913039 NFE TRANSFAC yes 45908993 4042 54541651
chr17 45913042 45913056 TLX1 JASPAR yes 45908993 4049 54541652
chr17 45913060 45913069 SNAI2 JASPAR yes 45908993 4067 54541653
chr17 45913060 45913070 ID4 JASPAR yes 45908993 4067 54541654
chr17 45913066 45913073 NFATC2 JASPAR yes 45908993 4073 54541655
chr17 45913098 45913113 HSF1 JASPAR yes 45908993 4105 54541656
chr17 45913099 45913112 HSF1 JASPAR yes 45908993 4106 54541657
chr17 45913099 45913112 HSF4 JASPAR yes 45908993 4106 54541658
chr17 45913108 45913119 STAT1 JASPAR yes 45908993 4115 54541659
chr17 45913130 45913135 MYB TRANSFAC yes 45908993 4137 54541660
chr17 45913168 45913174 HiNF-A TRANSFAC yes 45908993 4175 54541661
chr17 45913173 45913188 ZIC3 JASPAR yes 45908993 4180 54541662
chr17 45913183 45913188 SP1 TRANSFAC yes 45908993 4190 54541663
chr17 45913194 45913209 NR2C2 JASPAR yes 45908993 4201 54541664
chr17 45913227 45913247 TP63 JASPAR yes 45908993 4234 54541665
chr17 45913228 45913246 TP53 JASPAR yes 45908993 4235 54541666
chr17 45913230 45913245 TP53 JASPAR yes 45908993 4237 54541667
chr17 45913242 45913246 H4TF2 TRANSFAC yes 45908993 4249 54541668
chr17 45913248 45913252 YY1 TRANSFAC yes 45908993 4255 54541669
chr17 45913262 45913277 LEF1 JASPAR yes 45908993 4269 54541670
chr17 45913263 45913281 RARA JASPAR yes 45908993 4270 54541671
chr17 45913266 45913278 INSM1 JASPAR yes 45908993 4273 54541672
chr17 45913308 45913328 PPARG JASPAR yes 45908993 4315 54541673
chr17 45913370 45913381 FLI1 JASPAR yes 45908993 4377 54541674
chr17 45913371 45913375 YY1 TRANSFAC yes 45908993 4378 54541675
chr17 45913371 45913381 ETV6 JASPAR yes 45908993 4378 54541676
chr17 45913371 45913384 ELF1 JASPAR yes 45908993 4378 54541677
chr17 45913372 45913380 FEV JASPAR yes 45908993 4379 54541678
chr17 45913374 45913381 SPIB JASPAR yes 45908993 4381 54541679
chr17 45913374 45913389 PRDM1 JASPAR yes 45908993 4381 54541680
chr17 45913383 45913389 TCF4 TRANSFAC yes 45908993 4390 54541681
chr17 45913385 45913399 MTF1 JASPAR yes 45908993 4392 54541682
chr17 45913404 45913415 EBF1 JASPAR yes 45908993 4411 54541683
chr17 45913404 45913425 ZNF263 JASPAR yes 45908993 4411 54541684
chr17 45913430 45913434 NFE TRANSFAC yes 45908993 4437 54541685
chr17 45913435 45913443 FOXO3 JASPAR yes 45908993 4442 54541686
chr17 45913438 45913451 ZBTB18 JASPAR yes 45908993 4445 54541687
chr17 45913439 45913449 MSC JASPAR yes 45908993 4446 54541688
chr17 45913439 45913449 NHLH1 JASPAR yes 45908993 4446 54541689
chr17 45913445 45913463 NFYA JASPAR yes 45908993 4452 54541690
chr17 45913454 45913466 YY1 JASPAR yes 45908993 4461 54541691
chr17 45913457 45913463 YY1 JASPAR yes 45908993 4464 54541692
chr17 45913469 45913490 ZNF263 JASPAR yes 45908993 4476 54541693
chr17 45913474 45913495 ZNF263 JASPAR yes 45908993 4481 54541694
chr17 45913480 45913491 E2F6 JASPAR yes 45908993 4487 54541695
chr17 45913481 45913486 SP1 TRANSFAC yes 45908993 4488 54541696
chr17 45913483 45913498 HNF4G JASPAR yes 45908993 4490 54541697
chr17 45913483 45913501 RARA JASPAR yes 45908993 4490 54541698
chr17 45913484 45913489 ETS2 TRANSFAC yes 45908993 4491 54541699
chr17 45913489 45913502 NR2F1 JASPAR yes 45908993 4496 54541700
chr17 45913493 45913497 ESR1 TRANSFAC yes 45908993 4500 54541701
chr17 45913493 45913510 PAX1 JASPAR yes 45908993 4500 54541702
chr17 45913493 45913510 PAX9 JASPAR yes 45908993 4500 54541703
chr17 45913509 45913530 MAFG JASPAR yes 45908993 4516 54541704
chr17 45913516 45913519 MYB TRANSFAC yes 45908993 4523 54541705
chr17 45913553 45913557 H4TF2 TRANSFAC yes 45908993 4560 54541706
chr17 45913557 45913561 NFE TRANSFAC yes 45908993 4564 54541707
chr17 45913562 45913573 TBX20 JASPAR yes 45908993 4569 54541708
chr17 45913562 45913573 TBX2 JASPAR yes 45908993 4569 54541709
chr17 45913563 45913573 TBX21 JASPAR yes 45908993 4570 54541710
chr17 45913564 45913572 TBX15 JASPAR yes 45908993 4571 54541711
chr17 45913564 45913572 TBX1 JASPAR yes 45908993 4571 54541712
chr17 45913564 45913572 TBX4 JASPAR yes 45908993 4571 54541713
chr17 45913564 45913572 TBX5 JASPAR yes 45908993 4571 54541714
chr17 45913565 45913586 ZNF263 JASPAR yes 45908993 4572 54541715
chr17 45913571 45913592 ZNF263 JASPAR yes 45908993 4578 54541716
chr17 45913576 45913586 SP1 JASPAR yes 45908993 4583 54541717
chr17 45913579 45913593 GLIS3 JASPAR yes 45908993 4586 54541718
chr17 45913595 45913606 NFE2 JASPAR yes 45908993 4602 54541719
chr17 45913596 45913607 FOSL2 JASPAR yes 45908993 4603 54541720
chr17 45913607 45913613 SP1 TRANSFAC yes 45908993 4614 54541721
chr17 45913613 45913633 RREB1 JASPAR yes 45908993 4620 54541722
chr17 45913614 45913622 MGA JASPAR yes 45908993 4621 54541723
chr17 45913614 45913622 TBX15 JASPAR yes 45908993 4621 54541724
chr17 45913614 45913622 TBX1 JASPAR yes 45908993 4621 54541725
chr17 45913614 45913622 TBX4 JASPAR yes 45908993 4621 54541726
chr17 45913614 45913622 TBX5 JASPAR yes 45908993 4621 54541727
chr17 45913620 45913639 PAX5 JASPAR yes 45908993 4627 54541728
chr17 45913623 45913640 PAX1 JASPAR yes 45908993 4630 54541729
chr17 45913623 45913640 PAX9 JASPAR yes 45908993 4630 54541730
chr17 45913650 45913664 ZIC1 JASPAR yes 45908993 4657 54541731
chr17 45913664 45913676 HNF1B JASPAR yes 45908993 4671 54541732
chr17 45913672 45913675 MYB TRANSFAC yes 45908993 4679 54541733
chr17 45913672 45913686 NR2F1 JASPAR yes 45908993 4679 54541734
chr17 45913672 45913687 HNF4G JASPAR yes 45908993 4679 54541735
chr17 45913672 45913687 NR2C2 JASPAR yes 45908993 4679 54541736
chr17 45913741 45913745 LFA1 TRANSFAC yes 45908993 4748 54541737
chr17 45913742 45913756 ZIC1 JASPAR yes 45908993 4749 54541738
chr17 45913764 45913769 H4TF1 TRANSFAC yes 45908993 4771 54541739
chr17 45913785 45913796 TFAP2A JASPAR yes 45908993 4792 54541740
chr17 45913785 45913796 TFAP2B JASPAR yes 45908993 4792 54541741
chr17 45913785 45913796 TFAP2C JASPAR yes 45908993 4792 54541742
chr17 45913799 45913810 NFKB1 JASPAR yes 45908993 4806 54541743
chr17 45913807 45913825 NFYA JASPAR yes 45908993 4814 54541744
chr17 45913832 45913850 ESR2 JASPAR yes 45908993 4839 54541745
chr17 45913833 45913848 ESR2 JASPAR yes 45908993 4840 54541746
chr17 45913834 45913854 ESR1 JASPAR yes 45908993 4841 54541747
chr17 45913839 45913854 ESR2 JASPAR yes 45908993 4846 54541748
chr17 45913840 45913851 ESRRA JASPAR yes 45908993 4847 54541749
chr17 45913847 45913866 REST JASPAR yes 45908993 4854 54541750
chr17 45913868 45913879 EBF1 JASPAR yes 45908993 4875 54541751
chr17 45913869 45913875 MZF1 JASPAR yes 45908993 4876 54541752
chr17 45913879 45913894 NR2C2 JASPAR yes 45908993 4886 54541753
chr17 45913903 45913908 ETS2 TRANSFAC yes 45908993 4910 54541754
chr17 45913928 45913938 SP1 JASPAR yes 45908993 4935 54541755
chr17 45913929 45913938 SP1 TRANSFAC yes 45908993 4936 54541756
chr17 45913930 45913936 MAZ TRANSFAC yes 45908993 4937 54541757
chr17 45913933 45913944 NFKB1 JASPAR yes 45908993 4940 54541758
chr17 45913934 45913944 NFKB1 JASPAR yes 45908993 4941 54541759
chr17 45913934 45913945 NFKB1 JASPAR yes 45908993 4941 54541760
chr17 45913937 45913952 HNF4A JASPAR yes 45908993 4944 54541761
chr17 45913952 45913973 REST JASPAR yes 45908993 4959 54541762
chr17 45913953 45913965 TAL1 JASPAR yes 45908993 4960 54541763
chr17 45913953 45913972 REST JASPAR yes 45908993 4960 54541764
chr17 45913954 45913967 ZBTB18 JASPAR yes 45908993 4961 54541765
chr17 45913969 45913981 PKNOX1 JASPAR yes 45908993 4976 54541766
chr17 45913969 45913981 PKNOX2 JASPAR yes 45908993 4976 54541767
chr17 45913969 45913981 TGIF1 JASPAR yes 45908993 4976 54541768
chr17 45913969 45913981 TGIF2 JASPAR yes 45908993 4976 54541769
chr17 45913970 45913980 ID4 JASPAR yes 45908993 4977 54541770
chr17 45913973 45913981 TBX15 JASPAR yes 45908993 4980 54541771
chr17 45913973 45913981 TBX1 JASPAR yes 45908993 4980 54541772
chr17 45913973 45913981 TBX4 JASPAR yes 45908993 4980 54541773
chr17 45913973 45913981 TBX5 JASPAR yes 45908993 4980 54541774
chr17 45913988 45914009 ZNF263 JASPAR yes 45908993 4995 54541775
chr17 45913990 45914005 TFAP2A JASPAR yes 45908993 4997 54541776
chr17 45913990 45914005 TFAP2C JASPAR yes 45908993 4997 54541777
chr17 45913993 45914004 TFAP2A JASPAR yes 45908993 5000 54541778
chr17 45913993 45914004 TFAP2B JASPAR yes 45908993 5000 54541779
chr17 45913993 45914004 TFAP2C JASPAR yes 45908993 5000 54541780
SNPs associated with LRRC46[ENSG00000141294.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 45921906 rs2325752 T C 6827 Heart 0.094054 4906173
chr17 45885756 rs9911983 C T 23237 Heart 0.128569 4906017
chr17 45909183 rs2277693 T G 0 Spleen 4.51686e-12 4906083
chr17 45912696 rs17701113 C T 0 Ovary 0.0398334 4906087
Details of LRRC46[ENSG00000141294.5]
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Genomic Location chr17:45908993-45915079[+]
TSS 45908993
Gene Name LRRC46
Ensembl ID ENSG00000141294.5
ENTREZID 90506
Uniprot
Q96FV0
Protein Name
Leucine-rich repeat-containing protein 46
Expression levels of LRRC46[ENSG00000141294.5]
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