EnhancerDB
  1. Home
  2. Gene
  3. PRDM16[ENSG00000142611.12]
Enhancers that regulate PRDM16[ENSG00000142611.12]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 2881485 2887915 enh87545 2985732 97817
Pancreas Stomach
chr1 2890445 2894595 enh87546 2985732 91137
Pancreas
chr1 2926645 2932355 enh87547 2985732 53377
Pancreas Thyroid
chr1 2952865 2957015 enh87548 2985732 28717
Pancreas
chr1 2989176 2989511 vista87 2985732 3444
VISTA
chr1 2992473 3001741 enh63976 2985732 6741
Heart
chr1 3008865 3013015 enh87549 2985732 23133
Pancreas
chr1 3016107 3024295 enh26492 2985732 30375
Pancreas Astrocyte Ovary Heart
chr1 3026280 3034115 enh63977 2985732 40548
Ovary Thyroid Pancreas Heart Stomach
chr1 3034325 3059175 enh49637 2985732 48593
Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Stomach Thyroid Muscle (Myoblast) Pancreas Heart
chr1 3060665 3064815 enh95359 2985732 74933
Ovary
chr1 3066165 3075775 enh63978 2985732 80433
Stomach Thyroid Heart
chr1 3075785 3097455 enh26493 2985732 90053
Brain (SK-N-SH) Large Intestine Ovary Astrocyte Lung Stomach Colon (HCT116) Thyroid Pancreas Spleen Muscle (Myotube) Uterus Heart
chr1 3077832 3078221 vista88 2985732 92100
VISTA
Transcript facotrs that regulate PRDM16[ENSG00000142611.12]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 2988900 2990083 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 2985732 3168 107801836
chr1 2989185 2989205 ESR1 JASPAR yes 2985732 3453 118217541
chr1 2989201 2989222 ZNF263 JASPAR yes 2985732 3469 118217542
chr1 2989202 2989223 ZNF263 JASPAR yes 2985732 3470 118217543
chr1 2989205 2989226 ZNF263 JASPAR yes 2985732 3473 118217544
chr1 2989209 2989220 E2F6 JASPAR yes 2985732 3477 118217545
chr1 2989219 2989234 TFAP2A JASPAR yes 2985732 3487 118217546
chr1 2989219 2989234 TFAP2C JASPAR yes 2985732 3487 118217547
chr1 2989220 2989231 EBF1 JASPAR yes 2985732 3488 118217548
chr1 2989220 2989231 TFAP2A JASPAR yes 2985732 3488 118217549
chr1 2989220 2989231 TFAP2B JASPAR yes 2985732 3488 118217550
chr1 2989220 2989231 TFAP2C JASPAR yes 2985732 3488 118217551
chr1 2989221 2989230 TFAP2A JASPAR yes 2985732 3489 118217552
chr1 2989223 2989241 ESR2 JASPAR yes 2985732 3491 118217553
chr1 2989226 2989230 LFA1 TRANSFAC yes 2985732 3494 118217554
chr1 2989229 2989234 MYC TRANSFAC yes 2985732 3497 118217555
chr1 2989236 2989246 SP1 JASPAR yes 2985732 3504 118217556
chr1 2989250 2989256 SP1 TRANSFAC yes 2985732 3518 118217557
chr1 2989250 2989260 SP1 JASPAR yes 2985732 3518 118217558
chr1 2989253 2989264 EBF1 JASPAR yes 2985732 3521 118217559
chr1 2989254 2989260 MZF1 JASPAR yes 2985732 3522 118217560
chr1 2989274 2989293 CTCF JASPAR yes 2985732 3542 118217561
chr1 2989294 2989303 THAP1 JASPAR yes 2985732 3562 118217562
chr1 2989297 2989301 LFA1 TRANSFAC yes 2985732 3565 118217563
chr1 2989318 2989329 E2F4 JASPAR yes 2985732 3586 118217564
chr1 2989319 2989324 SP1 TRANSFAC yes 2985732 3587 118217565
chr1 2989347 2989362 FOXP1 JASPAR yes 2985732 3615 118217566
chr1 2989354 2989360 HiNF-A TRANSFAC yes 2985732 3622 118217567
chr1 2989362 2989382 RREB1 JASPAR yes 2985732 3630 118217568
chr1 2989393 2989406 TFAP2A JASPAR yes 2985732 3661 118217569
chr1 2989393 2989406 TFAP2B JASPAR yes 2985732 3661 118217570
chr1 2989393 2989406 TFAP2C JASPAR yes 2985732 3661 118217571
chr1 2989395 2989415 ESR1 JASPAR yes 2985732 3663 118217572
chr1 2989398 2989416 ESR2 JASPAR yes 2985732 3666 118217573
chr1 2989399 2989417 ESR2 JASPAR yes 2985732 3667 118217574
chr1 2989400 2989415 ESR2 JASPAR yes 2985732 3668 118217575
chr1 2989400 2989420 ESR1 JASPAR yes 2985732 3668 118217576
chr1 2989409 2989421 TFAP2A JASPAR yes 2985732 3677 118217577
chr1 2989409 2989421 TFAP2B JASPAR yes 2985732 3677 118217578
chr1 2989409 2989421 TFAP2C JASPAR yes 2985732 3677 118217579
chr1 2989419 2989431 TEAD1 JASPAR yes 2985732 3687 118217580
chr1 2989419 2989435 ZNF143 JASPAR yes 2985732 3687 118217581
chr1 2989422 2989439 RXRA JASPAR yes 2985732 3690 118217582
chr1 2989433 2989448 RUNX2 JASPAR yes 2985732 3701 118217583
chr1 2989435 2989449 PLAG1 JASPAR yes 2985732 3703 118217584
chr1 2989445 2989451 SP1 TRANSFAC yes 2985732 3713 118217585
chr1 2989445 2989455 SP1 JASPAR yes 2985732 3713 118217586
chr1 2989447 2989461 PLAG1 JASPAR yes 2985732 3715 118217587
chr1 2989454 2989466 INSM1 JASPAR yes 2985732 3722 118217588
chr1 2989465 2989476 NRF1 JASPAR yes 2985732 3733 118217589
chr1 2989466 2989478 NHLH1 JASPAR yes 2985732 3734 118217590
chr1 2989467 2989476 SNAI2 JASPAR yes 2985732 3735 118217591
chr1 2989467 2989477 ID4 JASPAR yes 2985732 3735 118217592
chr1 2989467 2989477 NHLH1 JASPAR yes 2985732 3735 118217593
chr1 2989467 2989477 TCF3 JASPAR yes 2985732 3735 118217594
chr1 2989467 2989477 TCF4 JASPAR yes 2985732 3735 118217595
chr1 2989469 2989478 ZEB1 JASPAR yes 2985732 3737 118217596
chr1 2989485 2989491 ETS1 JASPAR yes 2985732 3753 118217597
chr1 2989485 2989491 SPI1 JASPAR yes 2985732 3753 118217598
SNPs associated with PRDM16[ENSG00000142611.12], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 3691470 rs1181893 A C 336285 Esophagus 0.231449 25599
chr1 3080940 rs1736522 C G,T 0 Esophagus 0.329452 18063
chr1 3817390 rs28623548 C G,T 462205 Heart 0.203998 26357
chr1 2933334 rs540018725 T G 52398 Breast 0.00401816 16490
chr1 3320163 rs2493286 G C 0 Spleen 0.0623177 21680
chr1 3030624 rs2981867 G A,C 0 Ovary 0.262432 17165
chr1 3011286 rs2981874 C G 0 Thyroid 0.00474026 16935
chr1 3574289 rs12089203 G T 219104 Liver 0.741372 24153
chr1 3134188 rs1875448 C T 0 Lung 0.298634 19025
chr1 3106305 rs7545798 A G 0 Adrenal 0.172389 18484
Details of PRDM16[ENSG00000142611.12]
Back to top
Genomic Location chr1:2985732-3355185[+]
TSS 2985732
Gene Name PRDM16
Ensembl ID ENSG00000142611.12
ENTREZID 63976
Uniprot
D6RDW0
Q9HAZ2
Protein Name
Alternative protein PRDM16
PR domain zinc finger protein 16
Expression levels of PRDM16[ENSG00000142611.12]
Back to top