EnhancerDB
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Enhancers that regulate SNRNP200[ENSG00000144028.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 96864385 96872015 enh86362 96971297 99282
Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (T-cell) Stomach
chr2 96888678 96893235 enh60838 96971297 78062
Stomach Peripheral Blood (MM.1S) Blood (OCI-LY7) Blood (GM12878)
chr2 96897522 96913735 enh5714 96971297 57562
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
chr2 96911483 96911666 vista32361 96971297 59631
VISTA
chr2 96918414 96926215 enh18729 96971297 45082
Placenta Heart
chr2 96922307 96922515 vista32362 96971297 48782
VISTA
chr2 96923702 96927090 vista897 96971297 44207
VISTA
chr2 96923964 96924135 vista32363 96971297 47162
VISTA
chr2 96978792 96985555 enh33500 96971297 7495
Liver (HepG2) Blood (T-cell) Astrocyte Blood (OCI-LY7) Muscle (Myoblast) Thymus
chr2 96995983 96996007 vista32364 96971297 24686
VISTA
chr2 97002945 97007095 enh110970 96971297 31648
Cervix (HeLa-S3)
chr2 97012594 97012961 vista32365 96971297 41297
VISTA
chr2 97059365 97066075 enh18730 96971297 88068
Placenta
chr2 97068805 97081235 enh48307 96971297 97508
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Stomach Colon (HCT116) Breast Lung (PC-9) Pancreas Spleen Thymus Heart
Transcript facotrs that regulate SNRNP200[ENSG00000144028.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SNRNP200[ENSG00000144028.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 96913532 rs371538750 CAAG C 26542 Esophagus 0.000158254 5899833
chr2 97063520 rs10207855 T G 92223 Heart 0.0104582 5900128
chr2 96763589 rs7565104 G A 176485 Breast 9.26966e-05 5899064
chr2 96763589 rs7565104 G A 176485 Ovary 0.253611 5899064
chr2 97615008 rs79623596 C A 643711 Liver 0.0610995 5902267
Details of SNRNP200[ENSG00000144028.10]
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Genomic Location chr2:96940074-96971297[-]
TSS 96971297
Gene Name SNRNP200
Ensembl ID ENSG00000144028.10
ENTREZID 23020
Uniprot
O75643
Protein Name
SNRNP200 protein
U5 small nuclear ribonucleoprotein 200 kDa helicase
Expression levels of SNRNP200[ENSG00000144028.10]
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