EnhancerDB
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Enhancers that regulate NRGN[ENSG00000154146.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 124511539 124517075 enh29223 124609742 92667
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Muscle (A673) Muscle (Myoblast) Muscle (Myotube)
chr11 124514246 124514548 vista11955 124609742 95194
VISTA
chr11 124525216 124530135 enh67968 124609742 79607
Muscle (A673) Neural Stem Cells (H9)
chr11 124552795 124553089 vista11956 124609742 56653
VISTA
chr11 124585865 124590515 enh98893 124609742 19227
Uterus
chr11 124587333 124587525 vista11957 124609742 22217
VISTA
chr11 124587586 124587756 vista11958 124609742 21986
VISTA
chr11 124591265 124604395 enh2080 124609742 5347
Prostate (PC-3) Large Intestine Muscle (A673) Blood (Karpas-422) Uterus Heart
chr11 124611800 124612504 vista11959 124609742 2058
VISTA
chr11 124626305 124630455 enh47534 124609742 16563
Thymus
chr11 124631233 124631497 vista11960 124609742 21491
VISTA
chr11 124637765 124642552 enh14360 124609742 28023
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast)
chr11 124638889 124639135 vista11961 124609742 29147
VISTA
chr11 124656509 124667315 enh43646 124609742 46767
Blood (GM12878) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Pancreas Muscle (Myotube)
chr11 124668888 124669222 vista11962 124609742 59146
VISTA
chr11 124680825 124686835 enh80046 124609742 71083
Prostate (PC-3) Lung (PC-9)
chr11 124691825 124695975 enh14361 124609742 82083
Placenta
chr11 124700585 124709756 enh14362 124609742 90843
Prostate (PC-3) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Placenta Lung (PC-9) Uterus Stomach
Transcript facotrs that regulate NRGN[ENSG00000154146.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 124611224 124611919 TCF7L2 GTRD no Colon (HCT116) 124609742 1482 108005359
chr11 124611822 124611832 HOXA13 JASPAR yes 124609742 2080 114149926
chr11 124611826 124611832 TBP TRANSFAC yes 124609742 2084 114149927
chr11 124611850 124611865 PRDM1 JASPAR yes 124609742 2108 114149928
chr11 124611851 124611866 LEF1 JASPAR yes 124609742 2109 114149929
chr11 124611889 124611898 TFAP2A JASPAR yes 124609742 2147 114149930
chr11 124611892 124611912 PPARG JASPAR yes 124609742 2150 114149931
chr11 124611894 124611906 TFAP2A JASPAR yes 124609742 2152 114149932
chr11 124611894 124611909 TFAP2A JASPAR yes 124609742 2152 114149933
chr11 124611894 124611909 TFAP2C JASPAR yes 124609742 2152 114149934
chr11 124611895 124611906 TFAP2A JASPAR yes 124609742 2153 114149935
chr11 124611895 124611906 TFAP2B JASPAR yes 124609742 2153 114149936
chr11 124611895 124611906 TFAP2C JASPAR yes 124609742 2153 114149937
chr11 124611896 124611905 TFAP2A JASPAR yes 124609742 2154 114149938
chr11 124611900 124611911 NFKB1 JASPAR yes 124609742 2158 114149939
chr11 124611901 124611905 LFA1 TRANSFAC yes 124609742 2159 114149940
chr11 124611904 124611919 ZIC3 JASPAR yes 124609742 2162 114149941
chr11 124611913 124611929 ZNF143 JASPAR yes 124609742 2171 114149942
chr11 124611935 124611955 TP53 JASPAR yes 124609742 2193 114149943
chr11 124611948 124611969 REST JASPAR yes 124609742 2206 114149944
chr11 124611952 124611956 NFE TRANSFAC yes 124609742 2210 114149945
chr11 124611993 124612386 ZNF143 GTRD no Epithelial (MCF-7) 124609742 2251 108005360
chr11 124611997 124612001 YY1 TRANSFAC yes 124609742 2255 114149946
chr11 124612007 124612026 PAX5 JASPAR yes 124609742 2265 114149947
chr11 124612008 124612029 ZNF263 JASPAR yes 124609742 2266 114149948
chr11 124612016 124612029 ELF1 JASPAR yes 124609742 2274 114149949
chr11 124612016 124612037 ZNF263 JASPAR yes 124609742 2274 114149950
chr11 124612017 124612021 LFA1 TRANSFAC yes 124609742 2275 114149951
chr11 124612019 124612030 FLI1 JASPAR yes 124609742 2277 114149952
chr11 124612026 124612047 ZNF263 JASPAR yes 124609742 2284 114149953
chr11 124612029 124612050 ZNF263 JASPAR yes 124609742 2287 114149954
chr11 124612036 124612056 RREB1 JASPAR yes 124609742 2294 114149955
chr11 124612041 124612062 ZNF263 JASPAR yes 124609742 2299 114149956
chr11 124612051 124612056 TFAP2A TRANSFAC yes 124609742 2309 114149957
chr11 124612051 124612057 MZF1 JASPAR yes 124609742 2309 114149958
chr11 124612052 124612073 ZNF263 JASPAR yes 124609742 2310 114149959
chr11 124612053 124612058 ETS2 TRANSFAC yes 124609742 2311 114149960
chr11 124612055 124612501 ZNF143 GTRD no Epithelial (MCF-7) 124609742 2313 108005361
chr11 124612058 124612062 LFA1 TRANSFAC yes 124609742 2316 114149961
chr11 124612071 124612076 SP1 TRANSFAC yes 124609742 2329 114149962
chr11 124612071 124612080 HIC2 JASPAR yes 124609742 2329 114149963
chr11 124612074 124612078 LFA1 TRANSFAC yes 124609742 2332 114149964
chr11 124612077 124612081 YY1 TRANSFAC yes 124609742 2335 114149965
chr11 124612081 124612095 SPIC JASPAR yes 124609742 2339 114149966
chr11 124612137 124612142 ETS2 TRANSFAC yes 124609742 2395 114149967
chr11 124612172 124612176 H4TF2 TRANSFAC yes 124609742 2430 114149968
chr11 124612177 124612191 SPI1 JASPAR yes 124609742 2435 114149969
chr11 124612177 124612191 SPIC JASPAR yes 124609742 2435 114149970
chr11 124612191 124612206 HSF1 JASPAR yes 124609742 2449 114149971
chr11 124612207 124612225 RARA JASPAR yes 124609742 2465 114149972
chr11 124612213 124612232 CTCF JASPAR yes 124609742 2471 114149973
chr11 124612217 124612227 FIGLA JASPAR yes 124609742 2475 114149974
chr11 124612219 124612224 USF2 TRANSFAC yes 124609742 2477 114149975
chr11 124612231 124612236 ETS2 TRANSFAC yes 124609742 2489 114149976
chr11 124612232 124612250 NR3C1 JASPAR yes 124609742 2490 114149977
chr11 124612246 124612250 NFE TRANSFAC yes 124609742 2504 114149978
chr11 124612249 124612270 ZNF263 JASPAR yes 124609742 2507 114149979
chr11 124612282 124612288 GATA3 JASPAR yes 124609742 2540 114149980
chr11 124612286 124612292 HiNF-A TRANSFAC yes 124609742 2544 114149981
chr11 124612287 124612301 SPI1 JASPAR yes 124609742 2545 114149982
chr11 124612287 124612301 SPIC JASPAR yes 124609742 2545 114149983
chr11 124612288 124612301 ELF1 JASPAR yes 124609742 2546 114149984
chr11 124612288 124612309 ZNF263 JASPAR yes 124609742 2546 114149985
chr11 124612296 124612311 FOXP1 JASPAR yes 124609742 2554 114149986
chr11 124612299 124612310 FOXP2 JASPAR yes 124609742 2557 114149987
chr11 124612299 124612781 ZNF143 GTRD no Epithelial (MCF-7) 124609742 2557 108005362
chr11 124612316 124612320 YY1 TRANSFAC yes 124609742 2574 114149988
chr11 124612332 124612339 SPIB JASPAR yes 124609742 2590 114149989
chr11 124612347 124612365 MAFF JASPAR yes 124609742 2605 114149990
chr11 124612349 124612364 MAFK JASPAR yes 124609742 2607 114149991
chr11 124612370 124612375 MYC TRANSFAC yes 124609742 2628 114149992
chr11 124612372 124612385 HNF1B JASPAR yes 124609742 2630 114149993
chr11 124612376 124612389 POU2F2 JASPAR yes 124609742 2634 114149994
chr11 124612376 124612390 POU1F1 JASPAR yes 124609742 2634 114149995
chr11 124612377 124612389 POU3F1 JASPAR yes 124609742 2635 114149996
chr11 124612377 124612389 POU3F2 JASPAR yes 124609742 2635 114149997
chr11 124612378 124612390 POU2F1 JASPAR yes 124609742 2636 114149998
chr11 124612379 124612388 POU3F4 JASPAR yes 124609742 2637 114149999
chr11 124612379 124612388 POU5F1B JASPAR yes 124609742 2637 114150000
chr11 124612380 124612388 FOXL1 JASPAR yes 124609742 2638 114150001
chr11 124612391 124612402 FOXB1 JASPAR yes 124609742 2649 114150002
chr11 124612392 124612400 FOXL1 JASPAR yes 124609742 2650 114150003
chr11 124612392 124612403 FOXB1 JASPAR yes 124609742 2650 114150004
chr11 124612394 124612402 FOXL1 JASPAR yes 124609742 2652 114150005
chr11 124612442 124613243 ZNF274 GTRD no Bone Marrow (K562) 124609742 2700 108005363
chr11 124612457 124612461 YY1 TRANSFAC yes 124609742 2715 114150006
chr11 124612473 124613090 ZNF274 GTRD no Liver (HepG2) 124609742 2731 108005364
chr11 124612496 124613086 ZNF274 GTRD no Liver (HepG2) 124609742 2754 108005365
SNPs associated with NRGN[ENSG00000154146.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 124657779 rs117984409 A G 40673 Esophagus 0.302326 2337773
chr11 125172593 rs750338 A G 555487 Esophagus 0.328139 2340405
chr11 125046603 rs78510879 G A 429497 Esophagus 0.242397 2339384
chr11 124406106 rs79937586 G A 203636 Spleen 0.260064 2337030
chr11 124209939 rs143569324 C T 399803 Uterus 0.424962 2336488
chr11 124612932 rs12293670 A G 0 Thyroid 2.61636e-14 2337576
chr11 124595252 rs57849144 A ACTATACTGTATGGATTTTCTC 14490 Lung 2.73094e-11 2337442
Details of NRGN[ENSG00000154146.8]
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Genomic Location chr11:124609742-124617106[+]
TSS 124609742
Gene Name NRGN
Ensembl ID ENSG00000154146.8
ENTREZID 4900
Uniprot
Q92686
A0A024R3M7
Protein Name
Neurogranin
Expression levels of NRGN[ENSG00000154146.8]
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