EnhancerDB
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Enhancers that regulate SMG1[ENSG00000157106.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 18946345 18959962 enh52230 18937776 8569
Liver (HepG2) Prostate (RWPE1) Large Intestine Esophagus Colon (HCT116) Lung (PC-9)
chr16 18965225 18976208 enh47931 18937776 27449
Skin (Keratinocyte) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Muscle (A673) Breast Thymus Heart
chr16 18998325 19002895 enh92650 18937776 60549
Stomach Liver (HepG2) Lung (PC-9)
chr16 19006885 19019935 enh31724 18937776 69109
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
chr16 19036885 19041035 enh52231 18937776 99109
Large Intestine
Transcript facotrs that regulate SMG1[ENSG00000157106.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SMG1[ENSG00000157106.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 19124898 rs79742219 A G 187122 Esophagus 0.174121 4360455
chr16 19393400 rs8048145 C A 455624 Heart 0.0260716 4362000
chr16 19889337 rs7196559 A G 951561 Pancreas 0.210287 4364669
chr16 18805316 rs72775689 G T 10859 Liver 0.0174525 4359062
Details of SMG1[ENSG00000157106.12]
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Genomic Location chr16:18816175-18937776[-]
TSS 18937776
Gene Name SMG1
Ensembl ID ENSG00000157106.12
ENTREZID 23049
Uniprot
Q96Q15
Protein Name
Serine/threonine-protein kinase SMG1
Expression levels of SMG1[ENSG00000157106.12]
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