EnhancerDB

Enhancers that regulate CCDC17[ENSG00000159588.10]

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears
chr1	45990749	45991039	vista1470	46089729	98690	VISTA
chr1	46006345	46010575	enh11828	46089729	79154	Placenta Liver (HepG2) Large Intestine Stomach
chr1	46008399	46008548	vista1471	46089729	81181	VISTA
chr1	46009549	46009894	vista1472	46089729	79835	VISTA
chr1	46010722	46010902	vista1473	46089729	78827	VISTA
chr1	46017985	46025555	enh61834	46089729	64174	Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (GM12878) Colon (HCT116) Lung (PC-9) Pancreas Stomach
chr1	46036965	46043695	enh11829	46089729	46034	Bone Marrow (K562) Placenta Lung (PC-9)
chr1	46081400	46085504	enh89481	46089729	4225	Prostate (RWPE1)
chr1	46102450	46102810	vista1474	46089729	12721	VISTA
chr1	46107783	46115355	enh321	46089729	18054	Blood (OCI-LY7) Blood (Karpas-422) Spleen Heart Stomach
chr1	46111666	46112048	vista1475	46089729	21937	VISTA
chr1	46132905	46150131	enh26671	46089729	43176	Liver (HepG2) Esophagus Astrocyte Stomach Muscle (A673) Pancreas (Panc1) Spleen Neural Stem Cells (H9) Heart
chr1	46185047	46190853	enh42947	46089729	95318	Muscle (Myoblast) Muscle (Myotube) Bone (Osteoblast)

Transcript facotrs that regulate CCDC17[ENSG00000159588.10]

Chrom.	Start	End	TF name	Source	Predicted site?	TSS of gene	Distance between TFBS and gene	id
chr1	46084756	46084771	MEF2A	JASPAR	yes	46089729	4958	28609450
chr1	46084757	46084772	MEF2C	JASPAR	yes	46089729	4957	28609451
chr1	46084758	46084770	MEF2B	JASPAR	yes	46089729	4959	28609452
chr1	46084758	46084770	MEF2D	JASPAR	yes	46089729	4959	28609453
chr1	46084760	46084764	YY1	TRANSFAC	yes	46089729	4965	28609454
chr1	46084778	46084789	CEBPB	JASPAR	yes	46089729	4940	28609455
chr1	46084781	46084793	YY1	JASPAR	yes	46089729	4936	28609456
chr1	46084813	46084827	RORA	JASPAR	yes	46089729	4902	28609457
chr1	46084831	46084845	PLAG1	JASPAR	yes	46089729	4884	28609458
chr1	46084838	46084853	TFAP2A	JASPAR	yes	46089729	4876	28609459
chr1	46084838	46084853	TFAP2C	JASPAR	yes	46089729	4876	28609460
chr1	46084840	46084853	ELF1	JASPAR	yes	46089729	4876	28609461
chr1	46084843	46084853	ETV6	JASPAR	yes	46089729	4876	28609462
chr1	46084843	46084854	FLI1	JASPAR	yes	46089729	4875	28609463
chr1	46084844	46084852	EHF	JASPAR	yes	46089729	4877	28609464
chr1	46084844	46084852	FEV	JASPAR	yes	46089729	4877	28609465
chr1	46084845	46084852	SPI1	JASPAR	yes	46089729	4877	28609466
chr1	46084871	46084881	NKX2-3	JASPAR	yes	46089729	4848	28609467
chr1	46084872	46084881	NKX2-8	JASPAR	yes	46089729	4848	28609468
chr1	46084875	46084884	ZEB1	JASPAR	yes	46089729	4845	28609469
chr1	46084878	46084883	USF2	TRANSFAC	yes	46089729	4846	28609470
chr1	46084885	46084900	TFAP2C	JASPAR	yes	46089729	4829	28609471
chr1	46084895	46084899	YY1	TRANSFAC	yes	46089729	4830	28609472
chr1	46084918	46084924	TCF1	TRANSFAC	yes	46089729	4805	28609473
chr1	46084950	46084961	GCM1	JASPAR	yes	46089729	4768	28609474
chr1	46084964	46084968	LFA1	TRANSFAC	yes	46089729	4761	28609475
chr1	46084981	46084996	SCRT1	JASPAR	yes	46089729	4733	28609476
chr1	46084983	46084996	SCRT2	JASPAR	yes	46089729	4733	28609477
chr1	46084985	46084991	PTF	TRANSFAC	yes	46089729	4738	28609478
chr1	46085004	46085018	NR2F1	JASPAR	yes	46089729	4711	28609479
chr1	46085006	46085018	INSM1	JASPAR	yes	46089729	4711	28609480
chr1	46085011	46085025	RXRG	JASPAR	yes	46089729	4704	28609481
chr1	46085013	46085017	ESR1	TRANSFAC	yes	46089729	4712	28609482
chr1	46085033	46085050	RARA	JASPAR	yes	46089729	4679	28609483
chr1	46085033	46085050	RXRA	JASPAR	yes	46089729	4679	28609484
chr1	46085037	46085052	NR2C2	JASPAR	yes	46089729	4677	28609485
chr1	46085048	46085055	JUN	TRANSFAC	yes	46089729	4674	28609486
chr1	46085055	46085062	NKX3-1	JASPAR	yes	46089729	4667	28609487
chr1	46085081	46085090	SOX9	JASPAR	yes	46089729	4639	28609488
chr1	46085115	46085131	RFX2	JASPAR	yes	46089729	4598	28609489
chr1	46085115	46085131	RFX4	JASPAR	yes	46089729	4598	28609490
chr1	46085141	46085147	TCF4	TRANSFAC	yes	46089729	4582	28609491
chr1	46085156	46085169	ELF1	JASPAR	yes	46089729	4560	28609492
chr1	46085159	46085166	SPIB	JASPAR	yes	46089729	4563	28609493
chr1	46085159	46085169	ETV6	JASPAR	yes	46089729	4560	28609494
chr1	46085159	46085170	FLI1	JASPAR	yes	46089729	4559	28609495
chr1	46085168	46085174	YY1	JASPAR	yes	46089729	4555	28609496
chr1	46085191	46085195	H1TF2	TRANSFAC	yes	46089729	4534	28609497
chr1	46085191	46085195	NFE	TRANSFAC	yes	46089729	4534	28609498
chr1	46085191	46085195	SRF	TRANSFAC	yes	46089729	4534	28609499
chr1	46085205	46085212	NKX3-1	JASPAR	yes	46089729	4517	28609500
chr1	46085225	46085229	ESR1	TRANSFAC	yes	46089729	4500	28609501
chr1	46085233	46085236	MYB	TRANSFAC	yes	46089729	4493	28609502
chr1	46085260	46085265	GATA2	JASPAR	yes	46089729	4464	28609503
chr1	46085277	46085288	ELF5	JASPAR	yes	46089729	4441	28609504
chr1	46085277	46085290	ELF1	JASPAR	yes	46089729	4439	28609505
chr1	46085277	46085291	SPIC	JASPAR	yes	46089729	4438	28609506
chr1	46085279	46085292	ZBTB18	JASPAR	yes	46089729	4437	28609507
chr1	46085300	46085321	REST	JASPAR	yes	46089729	4408	28609508
chr1	46085301	46085320	REST	JASPAR	yes	46089729	4409	28609509
chr1	46085312	46085316	H4TF2	TRANSFAC	yes	46089729	4413	28609510
chr1	46085341	46085345	ESR1	TRANSFAC	yes	46089729	4384	28609511
chr1	46085373	46085383	NKX2-3	JASPAR	yes	46089729	4346	28609512
chr1	46085374	46085383	NKX2-8	JASPAR	yes	46089729	4346	28609513
chr1	46085375	46085388	NR2F1	JASPAR	yes	46089729	4341	28609514
chr1	46085377	46085388	ESRRB	JASPAR	yes	46089729	4341	28609515
chr1	46085378	46085386	NR4A2	JASPAR	yes	46089729	4343	28609516
chr1	46085390	46085399	HIC2	JASPAR	yes	46089729	4330	28609517
chr1	46085391	46085400	NFIX	JASPAR	yes	46089729	4329	28609518
chr1	46085392	46085398	NFIC	JASPAR	yes	46089729	4331	28609519
chr1	46085420	46085425	GATA1	TRANSFAC	yes	46089729	4304	28609520
chr1	46085427	46085445	TP63	JASPAR	yes	46089729	4284	28609521
chr1	46085436	46085450	RXRB	JASPAR	yes	46089729	4279	28609522
chr1	46085437	46085448	USF1	JASPAR	yes	46089729	4281	28609523
chr1	46085437	46085448	USF2	JASPAR	yes	46089729	4281	28609524
chr1	46085438	46085448	MAX	JASPAR	yes	46089729	4281	28609525
chr1	46085439	46085452	NR2F1	JASPAR	yes	46089729	4277	28609526
chr1	46085450	46085462	INSM1	JASPAR	yes	46089729	4267	28609527
chr1	46085455	46085468	NFKB1	JASPAR	yes	46089729	4261	28609528
chr1	46085455	46085468	NFKB2	JASPAR	yes	46089729	4261	28609529
chr1	46085473	46085478	TFAP2A	TRANSFAC	yes	46089729	4251	28609530
chr1	46085473	46085479	MZF1	JASPAR	yes	46089729	4250	28609531
chr1	46085480	46085484	NFE	TRANSFAC	yes	46089729	4245	28609532
chr1	46085481	46085486	GATA2	JASPAR	yes	46089729	4243	28609533
chr1	46085486	46085501	HNF4G	JASPAR	yes	46089729	4228	28609534
chr1	46085487	46085502	HNF4A	JASPAR	yes	46089729	4227	28609535
chr1	46085490	46085498	LEF1	TRANSFAC	yes	46089729	4231	28609536

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id
chr1	45739315	rs3121734	G	C	346401	Esophagus	0.268301	282929
chr1	46612106	rs56226903	A	G	522377	Esophagus	0.000373505	287387
chr1	46601197	rs1473840	A	G	511468	Heart	0.140993	287260
chr1	46627502	rs60794562	A	C	537773	Pancreas	0.18923	287516
chr1	45244823	rs200575061	GACTTAA	G	840893	Breast	0.248279	281208
chr1	45765649	rs72890521	C	T	320067	Spleen	0.259068	283054
chr1	45328337	rs139407134	G	A	757379	Ovary	0.122394	281684
chr1	46527159	rs785508	G	A	437430	Thyroid	1.59166e-07	286711
chr1	45765601	rs72686444	T	C	320115	Liver	0.35129	283052
chr1	46864727	rs45619038	A	G	774998	Lung	0.0882476	288454

Genomic Location	chr1:46085716-46089729[-]
TSS	46089729
Gene Name	CCDC17
Ensembl ID	ENSG00000159588.10
ENTREZID	149483
Uniprot
Uniprot	Q96LX7
Protein Name
Protein Name	Coiled-coil domain-containing protein 17

EnhancerDB

Enhancers that regulate CCDC17[ENSG00000159588.10]

Transcript facotrs that regulate CCDC17[ENSG00000159588.10]

SNPs associated with CCDC17[ENSG00000159588.10], confirmed by eQTL

Details of CCDC17[ENSG00000159588.10]

Expression levels of CCDC17[ENSG00000159588.10]