EnhancerDB
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Enhancers that regulate AMICA1[ENSG00000160593.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 117998145 118002775 enh108503 118095809 93034
Lung (PC-9)
chr11 118017705 118021855 enh74926 118095809 73954
Muscle (A673)
chr11 118040462 118044612 enh64535 118095809 51197
Heart
chr11 118051304 118051408 vista11731 118095809 44401
VISTA
chr11 118065939 118066307 vista11732 118095809 29502
VISTA
chr11 118083385 118092215 enh2032 118095809 3594
Liver (HepG2) Blood (T-cell) Blood (Karpas-422) Blood (GM12878)
chr11 118109192 118109437 vista11733 118095809 13383
VISTA
chr11 118109664 118110018 vista11734 118095809 13855
VISTA
chr11 118112268 118112532 vista11735 118095809 16459
VISTA
chr11 118114869 118120099 enh62213 118095809 19060
Prostate (PC-3) Liver (HepG2) Esophagus Stomach Blood (T-cell) Epithelial (MCF-7)
chr11 118140825 118168885 enh47530 118095809 45016
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Breast Uterus Thymus Epithelial (MCF-7)
chr11 118146006 118146232 vista11736 118095809 50197
VISTA
chr11 118148186 118148361 vista11737 118095809 52377
VISTA
chr11 118153348 118153551 vista11738 118095809 57539
VISTA
chr11 118183665 118194730 enh2033 118095809 87856
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Blood (OCI-LY7) Stomach Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Epithelial (MCF-7)
chr11 118187372 118187677 vista11739 118095809 91563
VISTA
Transcript facotrs that regulate AMICA1[ENSG00000160593.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 118090799 118090809 NFIA JASPAR yes 118095809 5000 41759574
chr11 118090814 118090834 PPARG JASPAR yes 118095809 4975 41759576
chr11 118090816 118090821 TFAP2A TRANSFAC yes 118095809 4988 41759577
chr11 118090816 118090822 MZF1 JASPAR yes 118095809 4987 41759578
chr11 118090854 118090860 MZF1 JASPAR yes 118095809 4949 41759579
chr11 118090880 118090895 AR JASPAR yes 118095809 4914 41759580
chr11 118090888 118090906 SRF JASPAR yes 118095809 4903 41759581
chr11 118090903 118090910 JUN TRANSFAC yes 118095809 4899 41759582
chr11 118090930 118090951 ZNF263 JASPAR yes 118095809 4858 41759583
chr11 118090933 118090939 MZF1 JASPAR yes 118095809 4870 41759584
chr11 118090937 118090958 ZNF263 JASPAR yes 118095809 4851 41759585
chr11 118090965 118090974 VENTX JASPAR yes 118095809 4835 41759586
chr11 118090965 118090975 BARHL2 JASPAR yes 118095809 4834 41759587
chr11 118090971 118090976 GATA2 JASPAR yes 118095809 4833 41759588
chr11 118090971 118090978 GATA1 TRANSFAC yes 118095809 4831 41759589
chr11 118091050 118091056 ZNF354C JASPAR yes 118095809 4753 41759590
chr11 118091085 118091096 EBF1 JASPAR yes 118095809 4713 41759591
chr11 118091108 118091114 MZF1 JASPAR yes 118095809 4695 41759592
chr11 118091119 118091123 YY1 TRANSFAC yes 118095809 4686 41759593
chr11 118091124 118091135 EBF1 JASPAR yes 118095809 4674 41759594
chr11 118091134 118091152 MAFF JASPAR yes 118095809 4657 41759595
chr11 118091135 118091150 MAFK JASPAR yes 118095809 4659 41759596
chr11 118091144 118091148 YY1 TRANSFAC yes 118095809 4661 41759597
chr11 118091145 118091155 NFATC3 JASPAR yes 118095809 4654 41759598
chr11 118091146 118091153 NFATC2 JASPAR yes 118095809 4656 41759599
chr11 118091168 118091179 DUX4 JASPAR yes 118095809 4630 41759600
chr11 118091180 118091185 ETS2 TRANSFAC yes 118095809 4624 41759601
chr11 118091200 118091213 ATF4 JASPAR yes 118095809 4596 41759602
chr11 118091229 118091232 MYB TRANSFAC yes 118095809 4577 41759603
chr11 118091264 118091275 CEBPA JASPAR yes 118095809 4534 41759604
chr11 118091264 118091276 DBP JASPAR yes 118095809 4533 41759605
chr11 118091264 118091276 HLF JASPAR yes 118095809 4533 41759606
chr11 118091264 118091276 TEF JASPAR yes 118095809 4533 41759607
chr11 118091276 118091288 GLI2 JASPAR yes 118095809 4521 41759608
chr11 118091282 118091286 H4TF2 TRANSFAC yes 118095809 4523 41759609
chr11 118091288 118091297 POU3F4 JASPAR yes 118095809 4512 41759610
chr11 118091288 118091297 POU5F1B JASPAR yes 118095809 4512 41759611
chr11 118091290 118091296 TCF4 TRANSFAC yes 118095809 4513 41759612
chr11 118091306 118091313 E2F1 TRANSFAC yes 118095809 4496 41759613
chr11 118091325 118091329 TEAD2 TRANSFAC yes 118095809 4480 41759614
chr11 118091327 118091330 MYB TRANSFAC yes 118095809 4479 41759615
chr11 118091342 118091363 ZNF263 JASPAR yes 118095809 4446 41759616
chr11 118091358 118091379 IRF1 JASPAR yes 118095809 4430 41759617
chr11 118091377 118091382 ETS2 TRANSFAC yes 118095809 4427 41759618
chr11 118091428 118091447 RFX2 JASPAR yes 118095809 4362 41759619
chr11 118091431 118091448 RARA JASPAR yes 118095809 4361 41759620
chr11 118091454 118091463 ZEB1 JASPAR yes 118095809 4346 41759621
chr11 118091475 118091481 YY1 JASPAR yes 118095809 4328 41759622
chr11 118091482 118091501 CTCF JASPAR yes 118095809 4308 41759623
chr11 118091489 118091509 PPARG JASPAR yes 118095809 4300 41759624
chr11 118091491 118091509 ESR2 JASPAR yes 118095809 4300 41759625
chr11 118091492 118091507 ESR2 JASPAR yes 118095809 4302 41759626
chr11 118091498 118091513 NFYB JASPAR yes 118095809 4296 41759627
chr11 118091500 118091506 NFE2 TRANSFAC yes 118095809 4303 41759628
chr11 118091501 118091514 TFAP2A JASPAR yes 118095809 4295 41759629
chr11 118091505 118091509 H1TF2 TRANSFAC yes 118095809 4300 41759630
chr11 118091505 118091509 NFE TRANSFAC yes 118095809 4300 41759631
chr11 118091505 118091509 SRF TRANSFAC yes 118095809 4300 41759632
chr11 118091511 118091516 GATA2 JASPAR yes 118095809 4293 41759633
chr11 118091530 118091547 NR3C1 JASPAR yes 118095809 4262 41759634
chr11 118091530 118091547 NR3C2 JASPAR yes 118095809 4262 41759635
chr11 118091532 118091547 AR JASPAR yes 118095809 4262 41759636
chr11 118091557 118091569 NHLH1 JASPAR yes 118095809 4240 41759637
chr11 118091558 118091568 NHLH1 JASPAR yes 118095809 4241 41759638
chr11 118091569 118091587 NR3C1 JASPAR yes 118095809 4222 41759639
chr11 118091574 118091584 NFKB1 JASPAR yes 118095809 4225 41759640
chr11 118091574 118091595 REST JASPAR yes 118095809 4214 41759641
chr11 118091575 118091594 REST JASPAR yes 118095809 4215 41759642
chr11 118091577 118091592 TFAP2A JASPAR yes 118095809 4217 41759643
chr11 118091578 118091582 NFE TRANSFAC yes 118095809 4227 41759644
chr11 118091585 118091603 ESR2 JASPAR yes 118095809 4206 41759645
chr11 118091594 118091609 TFAP2A JASPAR yes 118095809 4200 41759646
chr11 118091596 118091611 TFAP2C JASPAR yes 118095809 4198 41759647
chr11 118091618 118091632 PLAG1 JASPAR yes 118095809 4177 41759648
chr11 118091623 118091629 YY1 JASPAR yes 118095809 4180 41759649
chr11 118091641 118091656 ESR2 JASPAR yes 118095809 4153 41759650
chr11 118091649 118091655 NFE2 TRANSFAC yes 118095809 4154 41759651
chr11 118091671 118091686 FOXP1 JASPAR yes 118095809 4123 41759652
chr11 118091680 118091686 SOX10 JASPAR yes 118095809 4123 41759653
chr11 118091747 118091755 MEIS2 JASPAR yes 118095809 4054 41759654
chr11 118091747 118091755 MEIS3 JASPAR yes 118095809 4054 41759655
chr11 118091748 118091752 NFE TRANSFAC yes 118095809 4057 41759656
chr11 118091769 118091787 SRF JASPAR yes 118095809 4022 41759657
chr11 118091772 118091787 STAT1 JASPAR yes 118095809 4022 41759658
chr11 118091774 118091785 STAT1 JASPAR yes 118095809 4024 41759659
chr11 118091774 118091785 STAT3 JASPAR yes 118095809 4024 41759660
chr11 118091775 118091786 STAT3 JASPAR yes 118095809 4023 41759661
chr11 118091775 118091790 HSF1 JASPAR yes 118095809 4019 41759662
chr11 118091782 118091797 SCRT1 JASPAR yes 118095809 4012 41759663
chr11 118091784 118091797 SCRT2 JASPAR yes 118095809 4012 41759664
chr11 118091790 118091806 SRF JASPAR yes 118095809 4003 41759665
chr11 118091790 118091808 SRF JASPAR yes 118095809 4001 41759666
chr11 118091791 118091803 SRF JASPAR yes 118095809 4006 41759667
chr11 118091793 118091805 SRF JASPAR yes 118095809 4004 41759668
chr11 118091803 118091816 HSF2 JASPAR yes 118095809 3993 41759669
chr11 118091809 118091819 NFATC3 JASPAR yes 118095809 3990 41759670
chr11 118091811 118091818 NFATC2 JASPAR yes 118095809 3991 41759671
chr11 118091812 118091822 RELA JASPAR yes 118095809 3987 41759672
chr11 118091821 118091825 NFE TRANSFAC yes 118095809 3984 41759673
chr11 118091821 118091826 GATA1 TRANSFAC yes 118095809 3983 41759674
chr11 118091821 118091827 GATA3 JASPAR yes 118095809 3982 41759675
chr11 118091833 118091836 MYB TRANSFAC yes 118095809 3973 41759676
chr11 118091875 118091879 YY1 TRANSFAC yes 118095809 3930 41759677
chr11 118091878 118091893 PRDM1 JASPAR yes 118095809 3916 41759678
chr11 118091881 118091886 ETS2 TRANSFAC yes 118095809 3923 41759679
chr11 118091887 118091908 IRF1 JASPAR yes 118095809 3901 41759680
chr11 118091912 118091928 SOX4 JASPAR yes 118095809 3881 41759681
chr11 118091913 118091923 MEOX2 JASPAR yes 118095809 3886 41759682
chr11 118091929 118091944 HSF1 JASPAR yes 118095809 3865 41759683
chr11 118091930 118091943 HSF1 JASPAR yes 118095809 3866 41759684
chr11 118091930 118091943 HSF2 JASPAR yes 118095809 3866 41759685
chr11 118091930 118091943 HSF4 JASPAR yes 118095809 3866 41759686
chr11 118091993 118091999 ETS1 JASPAR yes 118095809 3810 41759687
chr11 118091993 118092008 FOXP1 JASPAR yes 118095809 3801 41759688
chr11 118091998 118092010 IRF1 JASPAR yes 118095809 3799 41759689
chr11 118092004 118092014 MYF6 JASPAR yes 118095809 3795 41759690
chr11 118092023 118092043 PPARG JASPAR yes 118095809 3766 41759691
chr11 118092024 118092044 PPARG JASPAR yes 118095809 3765 41759692
chr11 118092034 118092038 H4TF2 TRANSFAC yes 118095809 3771 41759693
chr11 118092036 118092042 MZF1 JASPAR yes 118095809 3767 41759694
chr11 118092039 118092043 H1TF2 TRANSFAC yes 118095809 3766 41759695
chr11 118092039 118092043 NFE TRANSFAC yes 118095809 3766 41759696
chr11 118092039 118092043 SRF TRANSFAC yes 118095809 3766 41759697
chr11 118092046 118092056 NFIA JASPAR yes 118095809 3753 41759698
chr11 118092047 118092056 NFIX JASPAR yes 118095809 3753 41759699
chr11 118092047 118092068 REST JASPAR yes 118095809 3741 41759700
chr11 118092048 118092054 NFIC JASPAR yes 118095809 3755 41759701
chr11 118092068 118092074 MZF1 JASPAR yes 118095809 3735 41759702
chr11 118092072 118092082 NFATC3 JASPAR yes 118095809 3727 41759703
chr11 118092074 118092081 NFATC2 JASPAR yes 118095809 3728 41759704
chr11 118092075 118092083 FOXO3 JASPAR yes 118095809 3726 41759705
chr11 118092076 118092085 SRY JASPAR yes 118095809 3724 41759706
chr11 118092087 118092098 STAT1 JASPAR yes 118095809 3711 41759707
chr11 118092087 118092098 STAT3 JASPAR yes 118095809 3711 41759708
chr11 118092102 118092112 NFATC3 JASPAR yes 118095809 3697 41759709
chr11 118092103 118092110 NFATC2 JASPAR yes 118095809 3699 41759710
chr11 118092117 118092123 MAZ TRANSFAC yes 118095809 3686 41759711
chr11 118092119 118092129 SP1 JASPAR yes 118095809 3680 41759712
chr11 118092121 118092141 RREB1 JASPAR yes 118095809 3668 41759713
chr11 118092122 118092127 SP1 TRANSFAC yes 118095809 3682 41759714
chr11 118092136 118092141 TFAP2A TRANSFAC yes 118095809 3668 41759715
chr11 118092136 118092142 MZF1 JASPAR yes 118095809 3667 41759716
chr11 118092138 118092156 NR3C1 JASPAR yes 118095809 3653 41759717
chr11 118092163 118092176 ELF3 JASPAR yes 118095809 3633 41759718
SNPs associated with AMICA1[ENSG00000160593.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 117750951 rs145147876 G T 313504 Esophagus 0.232485 2295640
chr11 118116125 rs68001644 CCATT C 20316 Esophagus 0.0116761 2297957
chr11 119093612 rs73003006 G A 997803 Esophagus 0.261954 2302676
chr11 118117709 rs57780042 GA G 21900 Breast 0.0223581 2297977
chr11 117434146 rs7113635 A G 630309 Spleen 0.306851 2293611
chr11 118111346 rs10892228 G A 15537 Lung 0.00640192 2297918
chr11 118169825 rs11607701 G A 74016 Stomach 0.106822 2298357
chr11 118084980 rs11216819 G A 0 Adrenal 3.96223e-09 2297813
Details of AMICA1[ENSG00000160593.13]
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Genomic Location chr11:118064455-118095809[-]
TSS 118095809
Gene Name AMICA1
Ensembl ID ENSG00000160593.13
ENTREZID
Uniprot
Protein Name
AMICA1 protein
Junctional adhesion molecule-like
Expression levels of AMICA1[ENSG00000160593.13]
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