EnhancerDB
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Enhancers that regulate SEPN1[ENSG00000162430.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 26013045 26035965 enh11635 26126667 90702
Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 26033818 26034000 vista842 26126667 92667
VISTA
chr1 26036765 26043255 enh87586 26126667 83412
Pancreas Blood (T-cell)
chr1 26050545 26059593 enh49688 26126667 67074
Brain (SK-N-SH) Large Intestine Ovary Stomach Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr1 26060594 26065875 enh64014 26126667 60792
Stomach Thyroid Heart
chr1 26067674 26072875 enh11636 26126667 53792
Large Intestine Esophagus Stomach Placenta Thyroid Uterus Adrenal Pancreas Spleen Neural Stem Cells (H9) Heart
chr1 26079445 26084975 enh47156 26126667 41692
Thymus Blood (T-cell)
chr1 26081315 26081453 vista843 26126667 45214
VISTA
chr1 26089785 26095558 enh87587 26126667 31109
Pancreas Thyroid Brain (SK-N-SH) Blood (T-cell)
chr1 26095825 26099975 enh47157 26126667 26692
Thymus
chr1 26101389 26101767 vista844 26126667 24900
VISTA
chr1 26114865 26119955 enh11637 26126667 6712
Placenta
chr1 26120852 26121165 vista845 26126667 5502
VISTA
chr1 26123435 26123824 vista846 26126667 2843
VISTA
chr1 26151305 26158275 enh11638 26126667 24638
Placenta Adrenal
chr1 26169085 26173735 enh159 26126667 42418
Blood (OCI-LY7) Blood (Karpas-422)
chr1 26179185 26183335 enh90659 26126667 52518
Bone Marrow (K562)
chr1 26184900 26185246 vista847 26126667 58233
VISTA
chr1 26191885 26196335 enh49689 26126667 65218
Liver (HepG2) Large Intestine Liver Pancreas Stomach
chr1 26201699 26201757 vista848 26126667 75032
VISTA
chr1 26203289 26210175 enh11639 26126667 76622
Esophagus Placenta Pancreas Lung (PC-9)
chr1 26213205 26226323 enh11640 26126667 86538
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus
Transcript facotrs that regulate SEPN1[ENSG00000162430.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 26121162 26131757 ZNF274 GTRD no Bone Marrow (K562) 26126667 0 107802514
chr1 26123453 26123463 NFATC3 JASPAR yes 26126667 3204 118254161
chr1 26123455 26123462 NFATC2 JASPAR yes 26126667 3205 118254162
chr1 26123455 26123466 NFKB1 JASPAR yes 26126667 3201 118254163
chr1 26123465 26123476 PHOX2A JASPAR yes 26126667 3191 118254164
chr1 26123465 26123476 PROP1 JASPAR yes 26126667 3191 118254165
chr1 26123478 26123493 TFAP2C JASPAR yes 26126667 3174 118254166
chr1 26123479 26123490 EBF1 JASPAR yes 26126667 3177 118254167
chr1 26123479 26123492 TFAP2A JASPAR yes 26126667 3175 118254168
chr1 26123479 26123492 TFAP2B JASPAR yes 26126667 3175 118254169
chr1 26123479 26123492 TFAP2C JASPAR yes 26126667 3175 118254170
chr1 26123487 26123491 LFA1 TRANSFAC yes 26126667 3176 118254171
chr1 26123493 26123512 CTCF JASPAR yes 26126667 3155 118254172
chr1 26123503 26123512 THAP1 JASPAR yes 26126667 3155 118254173
chr1 26123506 26123511 ETS2 TRANSFAC yes 26126667 3156 118254174
chr1 26123541 26123554 ELF1 JASPAR yes 26126667 3113 118254175
chr1 26123541 26123562 ZNF263 JASPAR yes 26126667 3105 118254176
chr1 26123543 26123554 ETV2 JASPAR yes 26126667 3113 118254177
chr1 26123544 26123554 ERF JASPAR yes 26126667 3113 118254178
chr1 26123544 26123554 ETS1 JASPAR yes 26126667 3113 118254179
chr1 26123544 26123555 ELK4 JASPAR yes 26126667 3112 118254180
chr1 26123544 26123555 FLI1 JASPAR yes 26126667 3112 118254181
chr1 26123571 26123584 SMAD2 JASPAR yes 26126667 3083 118254182
chr1 26123583 26123603 RREB1 JASPAR yes 26126667 3064 118254183
chr1 26123587 26123607 RREB1 JASPAR yes 26126667 3060 118254184
chr1 26123589 26123609 RREB1 JASPAR yes 26126667 3058 118254185
chr1 26123591 26123611 RREB1 JASPAR yes 26126667 3056 118254186
chr1 26123605 26123616 NRF1 JASPAR yes 26126667 3051 118254187
chr1 26123606 26123617 NRF1 JASPAR yes 26126667 3050 118254188
chr1 26123607 26123618 NRF1 JASPAR yes 26126667 3049 118254189
chr1 26123608 26123619 NRF1 JASPAR yes 26126667 3048 118254190
chr1 26123609 26123620 NRF1 JASPAR yes 26126667 3047 118254191
chr1 26123614 26123625 NRF1 JASPAR yes 26126667 3042 118254192
chr1 26123655 26123675 RREB1 JASPAR yes 26126667 2992 118254193
chr1 26123671 26123686 PRDM1 JASPAR yes 26126667 2981 118254194
chr1 26123672 26123693 ZNF263 JASPAR yes 26126667 2974 118254195
chr1 26123673 26123694 IRF1 JASPAR yes 26126667 2973 118254196
chr1 26123677 26123692 PRDM1 JASPAR yes 26126667 2975 118254197
chr1 26123682 26123695 SMAD2 JASPAR yes 26126667 2972 118254198
chr1 26123705 26123725 RREB1 JASPAR yes 26126667 2942 118254199
chr1 26123707 26123727 RREB1 JASPAR yes 26126667 2940 118254200
chr1 26123728 26123741 SMAD2 JASPAR yes 26126667 2926 118254201
chr1 26123751 26123769 ESR1 JASPAR yes 26126667 2898 118254202
chr1 26123758 26123768 SP1 JASPAR yes 26126667 2899 118254203
chr1 26123761 26123767 NFE2 TRANSFAC yes 26126667 2900 118254204
chr1 26123778 26123790 TFAP2A JASPAR yes 26126667 2877 118254205
chr1 26123784 26123804 ESR1 JASPAR yes 26126667 2863 118254206
chr1 26123789 26123804 ESR2 JASPAR yes 26126667 2863 118254207
chr1 26123789 26123809 ESR1 JASPAR yes 26126667 2858 118254208
chr1 26123790 26123794 ESR1 TRANSFAC yes 26126667 2873 118254209
chr1 26123795 26123806 E2F6 JASPAR yes 26126667 2861 118254210
chr1 26123816 26123822 ZNF354C JASPAR yes 26126667 2845 118254211
SNPs associated with SEPN1[ENSG00000162430.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 25193927 rs3131516 A G 932740 Esophagus 0.302434 168900
chr1 26120653 rs76829068 G T 6014 Esophagus 0.000511869 176055
chr1 25291448 rs78666056 C T 835219 Esophagus 0.000711261 169933
chr1 26518510 rs369145973 CCAGG C 373797 Heart 7.57439e-08 178909
chr1 26097731 rs2072748 C T 28936 Pancreas 0.143932 175907
chr1 25274154 rs181922971 T C 852513 Breast 0.331438 169722
chr1 25521090 rs12736858 C T 605577 Spleen 0.396895 172054
chr1 27075414 rs12145547 G C 930701 Uterus 0.178097 182025
chr1 26180444 rs112573235 C T 35731 Thyroid 0.000830823 176434
chr1 26362219 rs41284319 C T 217506 Liver 0.189456 177931
chr1 25291448 rs78666056 C T 835219 Lung 0.0493936 169933
chr1 25221624 rs114494147 T A 905043 Adrenal 0.155684 169082
Details of SEPN1[ENSG00000162430.12]
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Genomic Location chr1:26126667-26144713[+]
TSS 26126667
Gene Name SEPN1
Ensembl ID ENSG00000162430.12
ENTREZID
Uniprot
Protein Name
Expression levels of SEPN1[ENSG00000162430.12]
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