EnhancerDB
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Enhancers that regulate TRIM46[ENSG00000163462.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 155042384 155046446 enh115372 155145873 99427
Brain (SK-N-SH)
chr1 155052148 155052357 vista3414 155145873 93516
VISTA
chr1 155052572 155053010 vista3415 155145873 92863
VISTA
chr1 155052803 155057322 enh85976 155145873 88551
Colon (HCT116) Prostate (RWPE1)
chr1 155055153 155055331 vista3416 155145873 90542
VISTA
chr1 155061898 155069199 enh12283 155145873 76674
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Stomach Placenta Uterus Heart
chr1 155064132 155064186 vista3417 155145873 81687
VISTA
chr1 155064813 155064992 vista3418 155145873 80881
VISTA
chr1 155066604 155066635 vista3419 155145873 79238
VISTA
chr1 155072845 155082595 enh12284 155145873 63278
Liver (HepG2) Large Intestine Placenta Spleen Stomach
chr1 155088205 155094915 enh95908 155145873 50958
Stomach Epithelial (MCF-7)
chr1 155097183 155097419 vista3420 155145873 48454
VISTA
chr1 155098409 155098801 vista3421 155145873 47072
VISTA
chr1 155129665 155133815 enh12285 155145873 12058
Placenta
chr1 155136585 155141535 enh12286 155145873 4338
Heart Lung Placenta Uterus Stomach
chr1 155164183 155164959 vista3422 155145873 18310
VISTA
chr1 155186185 155200282 enh647 155145873 40312
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
chr1 155208862 155213262 enh648 155145873 62989
Prostate (RWPE1) Cervix (HeLa-S3) Blood (Karpas-422)
chr1 155218125 155223895 enh649 155145873 72252
Blood (Karpas-422)
Transcript facotrs that regulate TRIM46[ENSG00000163462.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 155140881 155140901 RREB1 JASPAR yes 155145873 4972 32335242
chr1 155140891 155140899 TBX5 JASPAR yes 155145873 4974 32335243
chr1 155140891 155140900 ZEB1 JASPAR yes 155145873 4973 32335244
chr1 155140891 155140904 ZBTB18 JASPAR yes 155145873 4969 32335245
chr1 155140892 155140902 ID4 JASPAR yes 155145873 4971 32335246
chr1 155140892 155140902 TCF3 JASPAR yes 155145873 4971 32335247
chr1 155140892 155140902 TCF4 JASPAR yes 155145873 4971 32335248
chr1 155140894 155140899 USF2 TRANSFAC yes 155145873 4974 32335249
chr1 155140903 155140916 POU2F2 JASPAR yes 155145873 4957 32335250
chr1 155140908 155140922 POU4F1 JASPAR yes 155145873 4951 32335251
chr1 155140908 155140924 POU4F3 JASPAR yes 155145873 4949 32335252
chr1 155140911 155140915 YY1 TRANSFAC yes 155145873 4958 32335253
chr1 155140925 155140938 NFKB1 JASPAR yes 155145873 4935 32335254
chr1 155140926 155140936 RELA JASPAR yes 155145873 4937 32335255
chr1 155140926 155140937 NFKB1 JASPAR yes 155145873 4936 32335256
chr1 155140928 155140947 CTCF JASPAR yes 155145873 4926 32335257
chr1 155140932 155140938 MZF1 JASPAR yes 155145873 4935 32335258
chr1 155140960 155140973 NR2F1 JASPAR yes 155145873 4900 32335259
chr1 155140964 155140972 CREB1 JASPAR yes 155145873 4901 32335260
chr1 155140976 155140982 ZNF354C JASPAR yes 155145873 4891 32335261
chr1 155141048 155141058 HOXA13 JASPAR yes 155145873 4815 32335262
chr1 155141049 155141060 CDX2 JASPAR yes 155145873 4813 32335263
chr1 155141059 155141063 YY1 TRANSFAC yes 155145873 4810 32335264
chr1 155141070 155141080 NFATC3 JASPAR yes 155145873 4793 32335265
chr1 155141071 155141086 FOXP1 JASPAR yes 155145873 4787 32335266
chr1 155141072 155141079 NFATC2 JASPAR yes 155145873 4794 32335267
chr1 155141074 155141085 FOXP2 JASPAR yes 155145873 4788 32335268
chr1 155141080 155141086 SOX10 JASPAR yes 155145873 4787 32335269
chr1 155141098 155141111 NFKB2 JASPAR yes 155145873 4762 32335270
chr1 155141112 155141118 HiNF-A TRANSFAC yes 155145873 4755 32335271
chr1 155141124 155141145 REST JASPAR yes 155145873 4728 32335272
chr1 155141125 155141144 REST JASPAR yes 155145873 4729 32335273
chr1 155141137 155141156 REST JASPAR yes 155145873 4717 32335274
chr1 155141151 155141155 LFA1 TRANSFAC yes 155145873 4718 32335275
chr1 155141153 155141172 REST JASPAR yes 155145873 4701 32335276
chr1 155141177 155141188 NFE2L2 JASPAR yes 155145873 4685 32335277
chr1 155141182 155141199 RXRA JASPAR yes 155145873 4674 32335278
chr1 155141183 155141198 AR JASPAR yes 155145873 4675 32335279
chr1 155141191 155141206 HNF4G JASPAR yes 155145873 4667 32335280
chr1 155141191 155141206 NR2C2 JASPAR yes 155145873 4667 32335281
chr1 155141192 155141207 HNF4A JASPAR yes 155145873 4666 32335282
chr1 155141193 155141203 SP1 JASPAR yes 155145873 4670 32335283
chr1 155141194 155141198 LFA1 TRANSFAC yes 155145873 4675 32335284
chr1 155141201 155141221 TP63 JASPAR yes 155145873 4652 32335285
chr1 155141202 155141220 TP73 JASPAR yes 155145873 4653 32335286
chr1 155141211 155141220 SNAI2 JASPAR yes 155145873 4653 32335287
chr1 155141212 155141217 USF2 TRANSFAC yes 155145873 4656 32335288
chr1 155141218 155141222 YY1 TRANSFAC yes 155145873 4651 32335289
chr1 155141230 155141235 SP1 TRANSFAC yes 155145873 4638 32335290
chr1 155141232 155141247 NR2C2 JASPAR yes 155145873 4626 32335291
chr1 155141233 155141247 RXRG JASPAR yes 155145873 4626 32335292
chr1 155141259 155141268 SOX9 JASPAR yes 155145873 4605 32335293
chr1 155141261 155141270 SRY JASPAR yes 155145873 4603 32335294
chr1 155141288 155141295 SPI1 JASPAR yes 155145873 4578 32335295
chr1 155141289 155141299 NFKB1 JASPAR yes 155145873 4574 32335296
chr1 155141289 155141299 REL JASPAR yes 155145873 4574 32335297
chr1 155141298 155141314 RFX2 JASPAR yes 155145873 4559 32335298
chr1 155141298 155141314 RFX3 JASPAR yes 155145873 4559 32335299
chr1 155141298 155141314 RFX4 JASPAR yes 155145873 4559 32335300
chr1 155141298 155141314 RFX5 JASPAR yes 155145873 4559 32335301
chr1 155141299 155141318 RFX2 JASPAR yes 155145873 4555 32335302
chr1 155141317 155141322 TFAP2A TRANSFAC yes 155145873 4551 32335303
chr1 155141317 155141323 MZF1 JASPAR yes 155145873 4550 32335304
chr1 155141318 155141339 IRF1 JASPAR yes 155145873 4534 32335305
chr1 155141321 155141335 IRF7 JASPAR yes 155145873 4538 32335306
chr1 155141322 155141336 STAT1 JASPAR yes 155145873 4537 32335307
chr1 155141322 155141337 PRDM1 JASPAR yes 155145873 4536 32335308
chr1 155141322 155141337 STAT2 JASPAR yes 155145873 4536 32335309
chr1 155141323 155141335 IRF1 JASPAR yes 155145873 4538 32335310
chr1 155141327 155141333 TCF4 TRANSFAC yes 155145873 4540 32335311
chr1 155141337 155141348 FOXA1 JASPAR yes 155145873 4525 32335312
chr1 155141357 155141362 MYC TRANSFAC yes 155145873 4511 32335313
chr1 155141362 155141373 USF1 JASPAR yes 155145873 4500 32335314
chr1 155141362 155141373 USF2 JASPAR yes 155145873 4500 32335315
chr1 155141363 155141377 EBF1 JASPAR yes 155145873 4496 32335316
chr1 155141365 155141370 USF2 TRANSFAC yes 155145873 4503 32335317
chr1 155141369 155141374 TFAP2A TRANSFAC yes 155145873 4499 32335318
chr1 155141369 155141375 MZF1 JASPAR yes 155145873 4498 32335319
chr1 155141380 155141388 FOXO3 JASPAR yes 155145873 4485 32335320
chr1 155141383 155141389 HiNF-A TRANSFAC yes 155145873 4484 32335321
chr1 155141388 155141400 TAL1 JASPAR yes 155145873 4473 32335322
chr1 155141389 155141401 BHLHE23 JASPAR yes 155145873 4472 32335323
chr1 155141390 155141400 BHLHE22 JASPAR yes 155145873 4473 32335324
chr1 155141390 155141400 NEUROD2 JASPAR yes 155145873 4473 32335325
chr1 155141390 155141400 NEUROG2 JASPAR yes 155145873 4473 32335326
chr1 155141390 155141400 OLIG1 JASPAR yes 155145873 4473 32335327
chr1 155141390 155141400 OLIG2 JASPAR yes 155145873 4473 32335328
chr1 155141390 155141400 OLIG3 JASPAR yes 155145873 4473 32335329
chr1 155141390 155141402 TAL1 JASPAR yes 155145873 4471 32335330
chr1 155141416 155141422 GATA3 JASPAR yes 155145873 4451 32335331
chr1 155141418 155141439 REST JASPAR yes 155145873 4434 32335332
chr1 155141421 155141425 H4TF2 TRANSFAC yes 155145873 4448 32335333
chr1 155141443 155141453 NFKB1 JASPAR yes 155145873 4420 32335334
chr1 155141449 155141457 TBX15 JASPAR yes 155145873 4416 32335335
chr1 155141463 155141478 ZIC3 JASPAR yes 155145873 4395 32335336
chr1 155141476 155141490 POU1F1 JASPAR yes 155145873 4383 32335337
chr1 155141477 155141489 POU3F2 JASPAR yes 155145873 4384 32335338
chr1 155141482 155141493 TFAP2C JASPAR yes 155145873 4380 32335339
chr1 155141513 155141523 MAX JASPAR yes 155145873 4350 32335340
chr1 155141514 155141524 CLOCK JASPAR yes 155145873 4349 32335341
chr1 155141514 155141524 MAX JASPAR yes 155145873 4349 32335342
chr1 155141514 155141524 MNT JASPAR yes 155145873 4349 32335343
chr1 155141515 155141522 USF1 JASPAR yes 155145873 4351 32335344
chr1 155141516 155141521 MYC TRANSFAC yes 155145873 4352 32335345
chr1 155141516 155141521 USF1 TRANSFAC yes 155145873 4352 32335346
chr1 155141516 155141521 USF2 TRANSFAC yes 155145873 4352 32335347
chr1 155141516 155141523 USF1 JASPAR yes 155145873 4350 32335348
chr1 155141523 155141533 MAX JASPAR yes 155145873 4340 32335349
SNPs associated with TRIM46[ENSG00000163462.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 154361126 rs115437600 G A 784747 Heart 0.368016 638302
chr1 154585146 rs149574144 T C 560727 Breast 0.268736 639422
chr1 155368203 rs7556102 C A 210756 Spleen 0.2715 644104
chr1 154789036 rs10796933 C T 356837 Uterus 0.477549 640930
chr1 154965113 rs7535144 G T 180760 Stomach 0.173647 642274
chr1 154981708 rs4845700 C T 164165 Adrenal 0.233553 642431
Details of TRIM46[ENSG00000163462.13]
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Genomic Location chr1:155145873-155157447[+]
TSS 155145873
Gene Name TRIM46
Ensembl ID ENSG00000163462.13
ENTREZID 80128
Uniprot
F5GYK0
B7Z4F9
A0A087WUH1
B7Z3S2
A0A0A0MS35
Q7Z4K8
Protein Name
isoform CRA_c
Tripartite motif-containing 46
Tripartite motif-containing protein 46
Expression levels of TRIM46[ENSG00000163462.13]
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