EnhancerDB
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Enhancers that regulate SMIM12[ENSG00000163866.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 35262405 35268035 enh87593 35325417 57382
Pancreas Adrenal
chr1 35268667 35276266 enh42929 35325417 49151
Muscle (Myotube)
chr1 35288785 35297065 enh64021 35325417 28352
Bone (Osteoblast) Stomach Pancreas Heart Epithelial (MCF-7)
chr1 35294449 35294485 vista1164 35325417 30932
VISTA
chr1 35299293 35304615 enh64022 35325417 20802
Thyroid Bone (Osteoblast) Heart
chr1 35306394 35321215 enh226 35325417 4202
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Esophagus Placenta Breast Spleen Prostate (RWPE1) Lung Heart
chr1 35309235 35309522 vista1165 35325417 15895
VISTA
chr1 35334105 35339335 enh47161 35325417 8688
Thymus
chr1 35336428 35336734 vista1166 35325417 11011
VISTA
chr1 35380705 35386955 enh227 35325417 55288
Bone Marrow (K562) Blood (Karpas-422)
chr1 35389087 35389416 vista1167 35325417 63670
VISTA
chr1 35394262 35394654 vista1168 35325417 68845
VISTA
chr1 35406625 35410775 enh228 35325417 81208
Blood (Karpas-422)
Transcript facotrs that regulate SMIM12[ENSG00000163866.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 35320429 35320433 YY1 TRANSFAC yes 35325417 4984 28078859
chr1 35320453 35320457 H1TF2 TRANSFAC yes 35325417 4960 28078860
chr1 35320453 35320457 NFE TRANSFAC yes 35325417 4960 28078861
chr1 35320453 35320457 SRF TRANSFAC yes 35325417 4960 28078862
chr1 35320489 35320504 TFAP2C JASPAR yes 35325417 4913 28078863
chr1 35320491 35320503 TFAP2B JASPAR yes 35325417 4914 28078864
chr1 35320491 35320503 TFAP2C JASPAR yes 35325417 4914 28078865
chr1 35320492 35320503 EBF1 JASPAR yes 35325417 4914 28078866
chr1 35320516 35320526 HMBOX1 JASPAR yes 35325417 4891 28078867
chr1 35320523 35320542 RFX2 JASPAR yes 35325417 4875 28078868
chr1 35320540 35320550 NFIA JASPAR yes 35325417 4867 28078869
chr1 35320541 35320550 NFIX JASPAR yes 35325417 4867 28078870
chr1 35320542 35320548 NFIC JASPAR yes 35325417 4869 28078871
chr1 35320558 35320562 H1TF2 TRANSFAC yes 35325417 4855 28078872
chr1 35320558 35320562 NFE TRANSFAC yes 35325417 4855 28078873
chr1 35320558 35320562 SRF TRANSFAC yes 35325417 4855 28078874
chr1 35320565 35320570 GATA2 JASPAR yes 35325417 4847 28078875
chr1 35320576 35320594 TP53 JASPAR yes 35325417 4823 28078876
chr1 35320578 35320593 TP53 JASPAR yes 35325417 4824 28078877
chr1 35320594 35320597 MYB TRANSFAC yes 35325417 4820 28078878
chr1 35320605 35320617 ZBTB7B JASPAR yes 35325417 4800 28078879
chr1 35320615 35320635 TBX19 JASPAR yes 35325417 4782 28078880
chr1 35320617 35320633 T JASPAR yes 35325417 4784 28078881
chr1 35320618 35320628 FIGLA JASPAR yes 35325417 4789 28078882
chr1 35320618 35320628 TCF3 JASPAR yes 35325417 4789 28078883
chr1 35320620 35320625 USF2 TRANSFAC yes 35325417 4792 28078884
chr1 35320626 35320640 GATA2 JASPAR yes 35325417 4777 28078885
chr1 35320628 35320634 GATA1 TRANSFAC yes 35325417 4783 28078886
chr1 35320628 35320636 GATA5 JASPAR yes 35325417 4781 28078887
chr1 35320636 35320654 NR3C1 JASPAR yes 35325417 4763 28078888
chr1 35320642 35320646 YY1 TRANSFAC yes 35325417 4771 28078889
chr1 35320659 35320668 NKX3-2 JASPAR yes 35325417 4749 28078890
chr1 35320666 35320677 PHOX2A JASPAR yes 35325417 4740 28078891
chr1 35320666 35320678 GRHL1 JASPAR yes 35325417 4739 28078892
chr1 35320677 35320693 SOX8 JASPAR yes 35325417 4724 28078893
chr1 35320690 35320700 GCM2 JASPAR yes 35325417 4717 28078894
chr1 35320690 35320701 GCM1 JASPAR yes 35325417 4716 28078895
chr1 35320700 35320712 YY1 JASPAR yes 35325417 4705 28078896
chr1 35320712 35320720 FOXO3 JASPAR yes 35325417 4697 28078897
chr1 35320714 35320725 STAT3 JASPAR yes 35325417 4692 28078898
chr1 35320732 35320742 MAX JASPAR yes 35325417 4675 28078899
chr1 35320733 35320743 NEUROG2 JASPAR yes 35325417 4674 28078900
chr1 35320745 35320755 SP1 JASPAR yes 35325417 4662 28078901
chr1 35320748 35320754 NFE2 TRANSFAC yes 35325417 4663 28078902
chr1 35320768 35320778 RELA JASPAR yes 35325417 4639 28078903
chr1 35320768 35320779 NFKB1 JASPAR yes 35325417 4638 28078904
chr1 35320770 35320785 STAT1 JASPAR yes 35325417 4632 28078905
chr1 35320772 35320783 STAT1 JASPAR yes 35325417 4634 28078906
chr1 35320772 35320783 STAT3 JASPAR yes 35325417 4634 28078907
chr1 35320794 35320799 ETS2 TRANSFAC yes 35325417 4618 28078908
chr1 35320796 35320804 EHF JASPAR yes 35325417 4613 28078909
chr1 35320798 35320810 INSM1 JASPAR yes 35325417 4607 28078910
chr1 35320802 35320815 NFKB2 JASPAR yes 35325417 4602 28078911
chr1 35320803 35320816 NFKB1 JASPAR yes 35325417 4601 28078912
chr1 35320803 35320816 NFKB2 JASPAR yes 35325417 4601 28078913
chr1 35320804 35320814 NFKB1 JASPAR yes 35325417 4603 28078914
chr1 35320804 35320814 RELA JASPAR yes 35325417 4603 28078915
chr1 35320804 35320815 NFKB1 JASPAR yes 35325417 4602 28078916
chr1 35320805 35320815 RELA JASPAR yes 35325417 4602 28078917
chr1 35320811 35320823 TEAD1 JASPAR yes 35325417 4594 28078918
chr1 35320818 35320828 SREBF2 JASPAR yes 35325417 4589 28078919
chr1 35320829 35320841 PKNOX1 JASPAR yes 35325417 4576 28078920
chr1 35320829 35320841 TGIF1 JASPAR yes 35325417 4576 28078921
chr1 35320829 35320841 TGIF2 JASPAR yes 35325417 4576 28078922
chr1 35320834 35320839 H4TF1 TRANSFAC yes 35325417 4578 28078923
chr1 35320847 35320868 REST JASPAR yes 35325417 4549 28078924
chr1 35320848 35320867 REST JASPAR yes 35325417 4550 28078925
chr1 35320853 35320859 SOX10 JASPAR yes 35325417 4558 28078926
chr1 35320858 35320863 GATA2 JASPAR yes 35325417 4554 28078927
chr1 35320863 35320867 LFA1 TRANSFAC yes 35325417 4550 28078928
chr1 35320882 35320892 ID4 JASPAR yes 35325417 4525 28078929
chr1 35320882 35320892 TCF4 JASPAR yes 35325417 4525 28078930
chr1 35320887 35320901 POU4F1 JASPAR yes 35325417 4516 28078931
chr1 35320887 35320903 POU4F2 JASPAR yes 35325417 4514 28078932
chr1 35320892 35320896 YY1 TRANSFAC yes 35325417 4521 28078933
chr1 35320935 35320940 GATA2 JASPAR yes 35325417 4477 28078934
chr1 35320952 35320957 SP1 TRANSFAC yes 35325417 4460 28078935
chr1 35320988 35320999 NRF1 JASPAR yes 35325417 4418 28078936
chr1 35320992 35321001 THAP1 JASPAR yes 35325417 4416 28078937
chr1 35321005 35321012 MEIS1 JASPAR yes 35325417 4405 28078938
chr1 35321005 35321013 MEIS2 JASPAR yes 35325417 4404 28078939
chr1 35321005 35321013 MEIS3 JASPAR yes 35325417 4404 28078940
chr1 35321012 35321016 H1TF2 TRANSFAC yes 35325417 4401 28078941
chr1 35321012 35321016 NFE TRANSFAC yes 35325417 4401 28078942
chr1 35321012 35321016 SRF TRANSFAC yes 35325417 4401 28078943
chr1 35321018 35321039 ZNF263 JASPAR yes 35325417 4378 28078944
chr1 35321027 35321030 MYB TRANSFAC yes 35325417 4387 28078945
chr1 35321079 35321091 GLI2 JASPAR yes 35325417 4326 28078946
chr1 35321080 35321100 RREB1 JASPAR yes 35325417 4317 28078947
chr1 35321100 35321108 EHF JASPAR yes 35325417 4309 28078948
chr1 35321102 35321109 SPIB JASPAR yes 35325417 4308 28078949
chr1 35321127 35321147 ESR1 JASPAR yes 35325417 4270 28078950
chr1 35321130 35321148 ESR1 JASPAR yes 35325417 4269 28078951
chr1 35321143 35321149 YY1 JASPAR yes 35325417 4268 28078952
chr1 35321162 35321166 YY1 TRANSFAC yes 35325417 4251 28078953
chr1 35321162 35321177 RUNX2 JASPAR yes 35325417 4240 28078954
chr1 35321164 35321184 RREB1 JASPAR yes 35325417 4233 28078955
chr1 35321166 35321186 RREB1 JASPAR yes 35325417 4231 28078956
chr1 35321168 35321188 RREB1 JASPAR yes 35325417 4229 28078957
chr1 35321169 35321183 PLAG1 JASPAR yes 35325417 4234 28078958
chr1 35321170 35321185 RUNX2 JASPAR yes 35325417 4232 28078959
chr1 35321182 35321192 SP1 JASPAR yes 35325417 4225 28078960
chr1 35321184 35321189 ETS2 TRANSFAC yes 35325417 4228 28078961
chr1 35321199 35321208 LEF1 TRANSFAC yes 35325417 4209 28078962
chr1 35321204 35321210 SOX10 JASPAR yes 35325417 4207 28078963
chr1 35321210 35321214 H1TF2 TRANSFAC yes 35325417 4203 28078964
chr1 35321210 35321214 NFE TRANSFAC yes 35325417 4203 28078965
chr1 35321210 35321214 SRF TRANSFAC yes 35325417 4203 28078966
SNPs associated with SMIM12[ENSG00000163866.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 35313926 rs3831970 TCA T 0 Esophagus 2.57687e-15 227294
chr1 35313926 rs3831970 TCA T 0 Esophagus 4.25893e-08 227294
chr1 35313926 rs3831970 TCA T 0 Esophagus 7.76444e-26 227294
chr1 35313926 rs3831970 TCA T 0 Heart 0.000186507 227294
chr1 35313926 rs3831970 TCA T 0 Heart 1.34178e-06 227294
chr1 35290952 rs604611 A G 0 Pancreas 4.79507e-05 227047
chr1 35313926 rs3831970 TCA T 0 Breast 8.26573e-10 227294
chr1 35313926 rs3831970 TCA T 0 Spleen 8.73422e-09 227294
chr1 34360686 rs77920931 C T 817652 Uterus 0.11077 224924
chr1 35313926 rs3831970 TCA T 0 Thyroid 9.00304e-13 227294
chr1 35313926 rs3831970 TCA T 0 Lung 1.38128e-05 227294
chr1 35313926 rs3831970 TCA T 0 Stomach 4.99912e-07 227294
chr1 35313926 rs3831970 TCA T 0 Adrenal 2.66003e-06 227294
Details of SMIM12[ENSG00000163866.8]
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Genomic Location chr1:35178338-35325417[-]
TSS 35325417
Gene Name SMIM12
Ensembl ID ENSG00000163866.8
ENTREZID 113444
Uniprot
Q96EX1
L0R6D7
Protein Name
Small integral membrane protein 12
Expression levels of SMIM12[ENSG00000163866.8]
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