EnhancerDB
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Enhancers that regulate OTX2[ENSG00000165588.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 57180716 57184866 enh68736 57277197 92331
Neural Stem Cells (H9)
chr14 57191847 57195997 enh68737 57277197 81200
Neural Stem Cells (H9)
chr14 57208707 57214015 enh68738 57277197 63182
Neural Stem Cells (H9) Brain (SK-N-MC)
chr14 57219785 57223935 enh96517 57277197 53262
Epithelial (MCF-7)
chr14 57225005 57229155 enh112325 57277197 48042
Brain (SK-N-MC)
chr14 57227025 57227386 vista17898 57277197 49811
VISTA
chr14 57229265 57233415 enh112326 57277197 43782
Brain (SK-N-MC)
chr14 57263098 57263138 vista17899 57277197 14059
VISTA
chr14 57264055 57264245 vista17900 57277197 12952
VISTA
chr14 57265284 57265457 vista17901 57277197 11740
VISTA
chr14 57265508 57265854 vista17902 57277197 11343
VISTA
chr14 57280703 57281214 vista17903 57277197 3506
VISTA
chr14 57282014 57282348 vista17904 57277197 4817
VISTA
chr14 57286945 57295175 enh75474 57277197 9748
Muscle (A673) Brain (SK-N-MC) Lung (PC-9)
chr14 57307919 57308194 vista17905 57277197 30722
VISTA
chr14 57311498 57318135 enh102279 57277197 34301
Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC)
chr14 57316970 57317076 vista17906 57277197 39773
VISTA
chr14 57319145 57327435 enh51834 57277197 41948
Stomach Large Intestine Embryonic Stem Cell Line (H1-hESC)
chr14 57320664 57324319 vista463 57277197 43467
VISTA
chr14 57343255 57343511 vista17907 57277197 66058
VISTA
chr14 57343585 57347735 enh104004 57277197 66388
Peripheral Blood (MM.1S)
chr14 57349439 57360155 enh68739 57277197 72242
Brain (SK-N-MC) Muscle (A673) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr14 57361394 57361614 vista17908 57277197 84197
VISTA
chr14 57361745 57374346 enh68740 57277197 84548
Muscle (A673) Neural Stem Cells (H9) Brain (SK-N-MC)
chr14 57366071 57366198 vista17909 57277197 88874
VISTA
chr14 57366705 57367109 vista17910 57277197 89508
VISTA
chr14 57372112 57372414 vista17911 57277197 94915
VISTA
Transcript facotrs that regulate OTX2[ENSG00000165588.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr14 57280523 57280915 ZNF143 GTRD no Epithelial (MCF-7) 57277197 3326 108104430
chr14 57280734 57280737 MYB TRANSFAC yes 57277197 3537 107554911
chr14 57280737 57280757 RREB1 JASPAR yes 57277197 3540 107554912
chr14 57280738 57280758 RREB1 JASPAR yes 57277197 3541 107554913
chr14 57280740 57280760 RREB1 JASPAR yes 57277197 3543 107554914
chr14 57280741 57280746 SP1 TRANSFAC yes 57277197 3544 107554915
chr14 57280741 57280762 ZNF263 JASPAR yes 57277197 3544 107554916
chr14 57280742 57280752 ZNF740 JASPAR yes 57277197 3545 107554917
chr14 57280742 57280762 RREB1 JASPAR yes 57277197 3545 107554918
chr14 57280744 57280765 ZNF263 JASPAR yes 57277197 3547 107554919
chr14 57280745 57280766 ZNF263 JASPAR yes 57277197 3548 107554920
chr14 57280747 57280768 ZNF263 JASPAR yes 57277197 3550 107554921
chr14 57280748 57280768 RREB1 JASPAR yes 57277197 3551 107554922
chr14 57280749 57280770 ZNF263 JASPAR yes 57277197 3552 107554923
chr14 57280750 57280771 ZNF263 JASPAR yes 57277197 3553 107554924
chr14 57280751 57280761 ZNF740 JASPAR yes 57277197 3554 107554925
chr14 57280751 57280765 PLAG1 JASPAR yes 57277197 3554 107554926
chr14 57280753 57280762 SP1 TRANSFAC yes 57277197 3556 107554927
chr14 57280753 57280763 SP1 JASPAR yes 57277197 3556 107554928
chr14 57280753 57280770 RXRA JASPAR yes 57277197 3556 107554929
chr14 57280753 57280774 ZNF263 JASPAR yes 57277197 3556 107554930
chr14 57280754 57280764 SP1 JASPAR yes 57277197 3557 107554931
chr14 57280755 57280761 MAZ TRANSFAC yes 57277197 3558 107554932
chr14 57280756 57280766 MZF1 JASPAR yes 57277197 3559 107554933
chr14 57280756 57280777 ZNF263 JASPAR yes 57277197 3559 107554934
chr14 57280759 57280768 SP1 TRANSFAC yes 57277197 3562 107554935
chr14 57280759 57280769 SP1 JASPAR yes 57277197 3562 107554936
chr14 57280759 57280780 ZNF263 JASPAR yes 57277197 3562 107554937
chr14 57280760 57280769 SP1 TRANSFAC yes 57277197 3563 107554938
chr14 57280761 57280767 MAZ TRANSFAC yes 57277197 3564 107554939
chr14 57280762 57280772 MZF1 JASPAR yes 57277197 3565 107554940
chr14 57280795 57280805 POU6F2 JASPAR yes 57277197 3598 107554941
chr14 57280796 57280806 ALX3 JASPAR yes 57277197 3599 107554942
chr14 57280796 57280806 EMX1 JASPAR yes 57277197 3599 107554943
chr14 57280796 57280806 EMX2 JASPAR yes 57277197 3599 107554944
chr14 57280796 57280806 ESX1 JASPAR yes 57277197 3599 107554945
chr14 57280796 57280806 GBX2 JASPAR yes 57277197 3599 107554946
chr14 57280796 57280806 GSX1 JASPAR yes 57277197 3599 107554947
chr14 57280796 57280806 GSX2 JASPAR yes 57277197 3599 107554948
chr14 57280796 57280806 HESX1 JASPAR yes 57277197 3599 107554949
chr14 57280796 57280806 HOXB2 JASPAR yes 57277197 3599 107554950
chr14 57280796 57280806 HOXB3 JASPAR yes 57277197 3599 107554951
chr14 57280796 57280806 LBX2 JASPAR yes 57277197 3599 107554952
chr14 57280796 57280806 LHX2 JASPAR yes 57277197 3599 107554953
chr14 57280796 57280806 LHX6 JASPAR yes 57277197 3599 107554954
chr14 57280796 57280806 MEOX1 JASPAR yes 57277197 3599 107554955
chr14 57280796 57280806 MEOX2 JASPAR yes 57277197 3599 107554956
chr14 57280796 57280806 MIXL1 JASPAR yes 57277197 3599 107554957
chr14 57280796 57280806 MNX1 JASPAR yes 57277197 3599 107554958
chr14 57280796 57280806 NOTO JASPAR yes 57277197 3599 107554959
chr14 57280796 57280806 RAX JASPAR yes 57277197 3599 107554960
chr14 57280796 57280807 HOXA10 JASPAR yes 57277197 3599 107554961
chr14 57280797 57280805 BSX JASPAR yes 57277197 3600 107554962
chr14 57280797 57280805 DLX6 JASPAR yes 57277197 3600 107554963
chr14 57280797 57280805 EN1 JASPAR yes 57277197 3600 107554964
chr14 57280797 57280805 ISX JASPAR yes 57277197 3600 107554965
chr14 57280797 57280805 LBX1 JASPAR yes 57277197 3600 107554966
chr14 57280797 57280805 LHX9 JASPAR yes 57277197 3600 107554967
chr14 57280797 57280805 LMX1A JASPAR yes 57277197 3600 107554968
chr14 57280797 57280805 LMX1B JASPAR yes 57277197 3600 107554969
chr14 57280797 57280805 NKX6-1 JASPAR yes 57277197 3600 107554970
chr14 57280797 57280805 NKX6-2 JASPAR yes 57277197 3600 107554971
chr14 57280797 57280805 PAX4 JASPAR yes 57277197 3600 107554972
chr14 57280797 57280805 PDX1 JASPAR yes 57277197 3600 107554973
chr14 57280797 57280805 PRRX1 JASPAR yes 57277197 3600 107554974
chr14 57280797 57280805 RAX2 JASPAR yes 57277197 3600 107554975
chr14 57280797 57280805 SHOX JASPAR yes 57277197 3600 107554976
chr14 57280797 57280805 UNCX JASPAR yes 57277197 3600 107554977
chr14 57280797 57280805 VAX1 JASPAR yes 57277197 3600 107554978
chr14 57280797 57280805 VAX2 JASPAR yes 57277197 3600 107554979
chr14 57280797 57280805 VSX1 JASPAR yes 57277197 3600 107554980
chr14 57280797 57280805 VSX2 JASPAR yes 57277197 3600 107554981
chr14 57280797 57280807 HOXB13 JASPAR yes 57277197 3600 107554982
chr14 57280797 57280807 HOXD13 JASPAR yes 57277197 3600 107554983
chr14 57280797 57280813 POU4F2 JASPAR yes 57277197 3600 107554984
chr14 57280797 57280813 POU4F3 JASPAR yes 57277197 3600 107554985
chr14 57280802 57280808 TBP TRANSFAC yes 57277197 3605 107554986
chr14 57280804 57280818 SPI1 JASPAR yes 57277197 3607 107554987
chr14 57280844 57280856 E2F8 JASPAR yes 57277197 3647 107554988
chr14 57280845 57280857 E2F8 JASPAR yes 57277197 3648 107554989
chr14 57280868 57280875 SPI1 JASPAR yes 57277197 3671 107554990
chr14 57280868 57280876 FEV JASPAR yes 57277197 3671 107554991
chr14 57280870 57280875 ETS2 TRANSFAC yes 57277197 3673 107554992
chr14 57280875 57280878 MYB TRANSFAC yes 57277197 3678 107554993
chr14 57280899 57280903 YY1 TRANSFAC yes 57277197 3702 107554994
chr14 57280903 57280913 NFATC3 JASPAR yes 57277197 3706 107554995
chr14 57280908 57280912 H1TF2 TRANSFAC yes 57277197 3711 107554996
chr14 57280908 57280912 NFE TRANSFAC yes 57277197 3711 107554997
chr14 57280908 57280912 SRF TRANSFAC yes 57277197 3711 107554998
chr14 57280912 57280927 MAFK JASPAR yes 57277197 3715 107554999
chr14 57280946 57280950 YY1 TRANSFAC yes 57277197 3749 107555000
chr14 57280966 57280983 BCL6B JASPAR yes 57277197 3769 107555001
chr14 57280985 57280989 YY1 TRANSFAC yes 57277197 3788 107555002
chr14 57280993 57280997 YY1 TRANSFAC yes 57277197 3796 107555003
chr14 57281019 57281023 TEAD2 TRANSFAC yes 57277197 3822 107555004
chr14 57281019 57281024 TBP TRANSFAC yes 57277197 3822 107555005
chr14 57281021 57281035 NR2F1 JASPAR yes 57277197 3824 107555006
chr14 57281037 57281040 MYB TRANSFAC yes 57277197 3840 107555007
chr14 57281043 57281054 PROP1 JASPAR yes 57277197 3846 107555008
chr14 57281049 57281060 HOXC13 JASPAR yes 57277197 3852 107555009
chr14 57281052 57281055 MYB TRANSFAC yes 57277197 3855 107555010
chr14 57281085 57281097 E2F8 JASPAR yes 57277197 3888 107555011
chr14 57281087 57281097 MZF1 JASPAR yes 57277197 3890 107555012
chr14 57281104 57281624 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 57277197 3907 108104431
chr14 57281115 57281131 POU4F3 JASPAR yes 57277197 3918 107555013
chr14 57281117 57281121 TEAD2 TRANSFAC yes 57277197 3920 107555014
chr14 57281117 57281122 TBP TRANSFAC yes 57277197 3920 107555015
chr14 57281117 57281123 TMF TRANSFAC yes 57277197 3920 107555016
chr14 57281148 57281159 RUNX1 JASPAR yes 57277197 3951 107555017
chr14 57281149 57281159 RUNX3 JASPAR yes 57277197 3952 107555018
chr14 57281150 57281159 RUNX2 JASPAR yes 57277197 3953 107555019
chr14 57281165 57281186 ZNF263 JASPAR yes 57277197 3968 107555020
chr14 57281174 57281195 IRF1 JASPAR yes 57277197 3977 107555021
chr14 57281178 57281192 STAT1 JASPAR yes 57277197 3981 107555022
chr14 57281189 57281203 TCF7L2 JASPAR yes 57277197 3992 107555023
chr14 57281193 57281199 TCF1 TRANSFAC yes 57277197 3996 107555024
chr14 57281198 57281204 GATA3 JASPAR yes 57277197 4001 107555025
chr14 57281204 57281209 NFY TRANSFAC yes 57277197 4007 107555026
chr14 57282014 57282020 TBP TRANSFAC yes 57277197 4817 107555027
chr14 57282014 57282029 FOXP1 JASPAR yes 57277197 4817 107555028
chr14 57282014 57282035 IRF1 JASPAR yes 57277197 4817 107555029
chr14 57282015 57282030 FOXP1 JASPAR yes 57277197 4818 107555030
chr14 57282016 57282037 IRF1 JASPAR yes 57277197 4819 107555031
chr14 57282017 57282032 FOXP1 JASPAR yes 57277197 4820 107555032
chr14 57282048 57282059 TBX20 JASPAR yes 57277197 4851 107555033
chr14 57282048 57282059 TBX2 JASPAR yes 57277197 4851 107555034
chr14 57282049 57282059 TBX21 JASPAR yes 57277197 4852 107555035
chr14 57282050 57282053 MYB TRANSFAC yes 57277197 4853 107555036
chr14 57282050 57282058 MGA JASPAR yes 57277197 4853 107555037
chr14 57282050 57282058 TBX15 JASPAR yes 57277197 4853 107555038
chr14 57282050 57282058 TBX1 JASPAR yes 57277197 4853 107555039
chr14 57282050 57282058 TBX4 JASPAR yes 57277197 4853 107555040
chr14 57282050 57282058 TBX5 JASPAR yes 57277197 4853 107555041
chr14 57282064 57282071 NFATC2 JASPAR yes 57277197 4867 107555042
chr14 57282097 57282115 SRF JASPAR yes 57277197 4900 107555043
chr14 57282106 57282112 SOX10 JASPAR yes 57277197 4909 107555044
chr14 57282106 57282121 PRDM1 JASPAR yes 57277197 4909 107555045
chr14 57282122 57282137 RFX5 JASPAR yes 57277197 4925 107555046
chr14 57282131 57282152 IRF1 JASPAR yes 57277197 4934 107555047
chr14 57282133 57282148 PRDM1 JASPAR yes 57277197 4936 107555048
chr14 57282133 57282148 STAT2 JASPAR yes 57277197 4936 107555049
chr14 57282136 57282151 FOXP1 JASPAR yes 57277197 4939 107555050
chr14 57282137 57282152 FOXP1 JASPAR yes 57277197 4940 107555051
chr14 57282139 57282154 FOXP1 JASPAR yes 57277197 4942 107555052
chr14 57282140 57282155 FOXP1 JASPAR yes 57277197 4943 107555053
chr14 57282163 57282177 RORA JASPAR yes 57277197 4966 107555054
chr14 57282169 57282173 YY1 TRANSFAC yes 57277197 4972 107555055
SNPs associated with OTX2[ENSG00000165588.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of OTX2[ENSG00000165588.12]
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Genomic Location chr14:57267425-57277197[-]
TSS 57277197
Gene Name OTX2
Ensembl ID ENSG00000165588.12
ENTREZID 5015
Uniprot
F1T0D0
F1T0C9
P32243
F1T0D1
Protein Name
Homeobox protein OTX2
Orthodenticle homeobox 2
Expression levels of OTX2[ENSG00000165588.12]
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