EnhancerDB
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Enhancers that regulate GKN1[ENSG00000169605.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 69103305 69109595 enh33417 69201705 92110
Astrocyte
chr2 69114664 69118926 enh44806 69201705 82779
Muscle (Myoblast) Muscle (Myotube)
chr2 69131784 69143115 enh5635 69201705 58590
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr2 69135600 69135857 vista31940 69201705 65848
VISTA
chr2 69143725 69151015 enh33418 69201705 50690
Astrocyte Cervix (HeLa-S3) Stomach
chr2 69157065 69161215 enh18630 69201705 40490
Placenta
chr2 69161565 69167355 enh18631 69201705 34350
Esophagus Skin (Keratinocyte) Placenta Prostate (RWPE1)
chr2 69163712 69163881 vista31941 69201705 37824
VISTA
chr2 69217525 69224165 enh101591 69201705 15820
Thyroid Bone (Osteoblast)
chr2 69241314 69241782 vista31942 69201705 39609
VISTA
chr2 69243205 69255375 enh58916 69201705 41500
Skin (Keratinocyte) Prostate (PC-3) Esophagus Muscle (A673) Breast Spleen
chr2 69250610 69250802 vista31943 69201705 48905
VISTA
chr2 69255805 69266335 enh33419 69201705 54100
Esophagus Astrocyte Brain (SK-N-MC) Muscle (Myoblast)
chr2 69260768 69260862 vista31944 69201705 59063
VISTA
chr2 69276045 69280210 enh81709 69201705 74340
Prostate (PC-3)
chr2 69286285 69291795 enh81710 69201705 84580
Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Stomach
chr2 69292254 69297277 enh62807 69201705 90549
Esophagus Stomach Prostate (RWPE1) Heart
Transcript facotrs that regulate GKN1[ENSG00000169605.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GKN1[ENSG00000169605.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 69067532 rs72830968 T C 134173 Esophagus 0.234936 5824778
chr2 69766529 rs61430106 A T 558423 Heart 0.166658 5828862
chr2 68244496 rs7420074 A C 957209 Pancreas 0.173046 5819647
chr2 69409222 rs6752908 C T 201116 Breast 0.450527 5827304
chr2 69347805 rs187004536 A T 139699 Uterus 0.194355 5826800
chr2 68823953 rs141040800 AT A 377752 Thyroid 0.230018 5822859
chr2 68448515 rs72833801 G A 753190 Liver 0.297847 5820576
chr2 70199756 rs62152025 C T 991650 Lung 0.332973 5832233
chr2 69243487 rs12185640 G A 35381 Stomach 0.342548 5825755
Details of GKN1[ENSG00000169605.5]
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Genomic Location chr2:69201705-69208106[+]
TSS 69201705
Gene Name GKN1
Ensembl ID ENSG00000169605.5
ENTREZID 56287
Uniprot
Q9NS71
Q53YU7
Protein Name
Gastrokine-1
Expression levels of GKN1[ENSG00000169605.5]
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