EnhancerDB
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  3. SYT12[ENSG00000173227.9]
Enhancers that regulate SYT12[ENSG00000173227.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 66667445 66674831 enh50859 66774249 99418
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
chr11 66677912 66691136 enh57584 66774249 83113
Bone Marrow (K562) Liver (HepG2) Lung (A549) Muscle (A673) Neural Stem Cells (H9) Stomach
chr11 66687548 66687652 vista10669 66774249 86597
VISTA
chr11 66694577 66706935 enh14010 66774249 67314
Bone Marrow (K562) Cervix (HeLa-S3) Liver (HepG2) Placenta Muscle (Myotube)
chr11 66697442 66697531 vista10670 66774249 76718
VISTA
chr11 66715574 66719895 enh14011 66774249 54354
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr11 66717584 66717809 vista10671 66774249 56440
VISTA
chr11 66730652 66737739 enh28840 66774249 36510
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Stomach
chr11 66738286 66738892 vista10672 66774249 35357
VISTA
chr11 66746953 66757544 enh67817 66774249 16705
Prostate (PC-3) Cervix (HeLa-S3) Colon (HCT116) Breast Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr11 66762321 66766851 enh14012 66774249 7398
Muscle (Myotube) Placenta Epithelial (MCF-7)
chr11 66781085 66785235 enh74818 66774249 6836
Muscle (A673)
chr11 66787325 66797555 enh1844 66774249 13076
Epithelial (MCF-7) Blood (OCI-LY7) Placenta Blood (Karpas-422) Stomach
chr11 66801218 66801427 vista10673 66774249 26969
VISTA
chr11 66825447 66832555 enh14013 66774249 51198
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
chr11 66829661 66830298 vista10674 66774249 55412
VISTA
chr11 66833545 66837695 enh14014 66774249 59296
Placenta
chr11 66841490 66853575 enh14015 66774249 67241
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
chr11 66844888 66845141 vista10675 66774249 70639
VISTA
chr11 66845381 66845631 vista10676 66774249 71132
VISTA
chr11 66845907 66846062 vista10677 66774249 71658
VISTA
chr11 66849173 66849303 vista10678 66774249 74924
VISTA
chr11 66854545 66858695 enh90901 66774249 80296
Bone Marrow (K562)
chr11 66865545 66875955 enh47497 66774249 91296
Peripheral Blood (MM.1S) Thymus Blood (T-cell)
Transcript facotrs that regulate SYT12[ENSG00000173227.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SYT12[ENSG00000173227.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 67510249 rs10791928 C T 691915 Esophagus 0.238087 2061024
chr11 67044850 rs3730140 G A 226516 Heart 0.165251 2056507
chr11 67506786 rs192947240 C T 688452 Pancreas 0.125109 2060887
chr11 67176368 rs11227786 G A 358034 Breast 0.283995 2057184
chr11 65776585 rs655744 T A,G 997664 Spleen 0.093805 2050408
chr11 66221451 rs61890362 T C 552798 Liver 0.411848 2052878
chr11 66924965 rs138770192 T C 106631 Adrenal 0.191726 2055989
Details of SYT12[ENSG00000173227.9]
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Genomic Location chr11:66774249-66818334[+]
TSS 66774249
Gene Name SYT12
Ensembl ID ENSG00000173227.9
ENTREZID 91683
Uniprot
Q8NDM9
Q8IV01
B0AZL9
Protein Name
Synaptotagmin-12
Expression levels of SYT12[ENSG00000173227.9]
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