EnhancerDB
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Enhancers that regulate SKIDA1[ENSG00000180592.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr10 21704242 21724835 enh13043 21814611 89776
Prostate (PC-3) Brain (SK-N-MC) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr10 21716825 21717072 vista6730 21814611 97539
VISTA
chr10 21725525 21740455 enh13044 21814611 74156
Muscle (A673) Placenta Peripheral Blood (MM.1S)
chr10 21749705 21756195 enh13045 21814611 58416
Placenta
chr10 21775665 21779815 enh101186 21814611 34796
Thyroid
chr10 21789044 21789221 vista6731 21814611 25390
VISTA
chr10 21790184 21790342 vista6732 21814611 24269
VISTA
chr10 21792582 21798473 enh50345 21814611 16138
Liver (HepG2) Large Intestine Embryonic Stem Cell Line (H1-hESC)
chr10 21795346 21795467 vista6733 21814611 19144
VISTA
chr10 21798958 21799135 vista6734 21814611 15476
VISTA
chr10 21799318 21799715 vista6735 21814611 14896
VISTA
chr10 21809167 21809536 vista6736 21814611 5075
VISTA
chr10 21816029 21816444 vista6737 21814611 1418
VISTA
chr10 21816987 21817223 vista6738 21814611 2376
VISTA
chr10 21824374 21824606 vista6739 21814611 9763
VISTA
chr10 21854145 21858379 enh67437 21814611 39534
Liver (HepG2) Neural Stem Cells (H9) Stomach
chr10 21868546 21872656 enh86858 21814611 53935
Blood (GM12878)
chr10 21876525 21882975 enh103286 21814611 61914
Peripheral Blood (MM.1S)
chr10 21887705 21891855 enh92194 21814611 73094
Liver (HepG2)
chr10 21909925 21917503 enh86004 21814611 95314
Colon (HCT116) Liver (HepG2)
Transcript facotrs that regulate SKIDA1[ENSG00000180592.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr10 21814071 21816702 POLR2A UCSC Txn Factor no Conserved 21814611 540 107902698
chr10 21815670 21816174 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1059 107902699
chr10 21815702 21816318 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1091 107902700
chr10 21815806 21816382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1195 107902701
chr10 21815813 21816333 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1202 107902702
chr10 21815879 21816315 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21814611 1268 107902703
chr10 21815891 21816561 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1280 107902704
chr10 21815919 21816295 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1308 107902705
chr10 21815921 21816297 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1310 107902706
chr10 21815936 21816259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1325 107902707
chr10 21815945 21816315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21814611 1334 107902708
chr10 21815951 21816155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1340 107902709
chr10 21815951 21816302 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1340 107902710
chr10 21815953 21816560 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1342 107902711
chr10 21815976 21816632 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21814611 1365 107902712
chr10 21815979 21816200 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1368 107902713
chr10 21816006 21816461 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1395 107902714
chr10 21816015 21816295 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21814611 1404 107902715
chr10 21816039 21816535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1428 107902716
chr10 21816044 21816050 PEA3 TRANSFAC yes 21814611 1433 21057124
chr10 21816044 21816055 FLI1 JASPAR yes 21814611 1433 21057125
chr10 21816051 21816066 ZIC3 JASPAR yes 21814611 1440 21057126
chr10 21816052 21816066 ZIC1 JASPAR yes 21814611 1441 21057127
chr10 21816052 21816432 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21814611 1441 107902717
chr10 21816066 21816466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1455 107902718
chr10 21816067 21816355 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1456 107902719
chr10 21816070 21816080 SP1 JASPAR yes 21814611 1459 21057128
chr10 21816071 21816076 ETS2 TRANSFAC yes 21814611 1460 21057129
chr10 21816080 21816536 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1469 107902720
chr10 21816085 21816469 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21814611 1474 107902721
chr10 21816089 21816093 H4TF2 TRANSFAC yes 21814611 1478 21057130
chr10 21816094 21816099 SP1 TRANSFAC yes 21814611 1483 21057131
chr10 21816094 21816105 E2F4 JASPAR yes 21814611 1483 21057132
chr10 21816095 21816100 SP1 TRANSFAC yes 21814611 1484 21057133
chr10 21816095 21816101 SP1 TRANSFAC yes 21814611 1484 21057134
chr10 21816099 21816104 ETS2 TRANSFAC yes 21814611 1488 21057135
chr10 21816106 21816446 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1495 107902722
chr10 21816109 21816119 GCM2 JASPAR yes 21814611 1498 21057136
chr10 21816109 21816120 GCM1 JASPAR yes 21814611 1498 21057137
chr10 21816109 21816385 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1498 107902723
chr10 21816111 21816120 THAP1 JASPAR yes 21814611 1500 21057138
chr10 21816114 21816119 SP1 TRANSFAC yes 21814611 1503 21057139
chr10 21816115 21816125 SP1 JASPAR yes 21814611 1504 21057140
chr10 21816118 21816123 SP1 TRANSFAC yes 21814611 1507 21057141
chr10 21816118 21816124 SP1 TRANSFAC yes 21814611 1507 21057142
chr10 21816121 21816497 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1510 107902724
chr10 21816132 21816448 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1521 107902725
chr10 21816132 21816522 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1521 107902726
chr10 21816133 21816463 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1522 107902727
chr10 21816138 21816142 LFA1 TRANSFAC yes 21814611 1527 21057143
chr10 21816141 21816597 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1530 107902728
chr10 21816146 21816152 PEA3 TRANSFAC yes 21814611 1535 21057144
chr10 21816147 21816155 EHF JASPAR yes 21814611 1536 21057145
chr10 21816148 21816518 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1537 107902729
chr10 21816156 21816400 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1545 107902730
chr10 21816158 21816163 SP1 TRANSFAC yes 21814611 1547 21057146
chr10 21816169 21816180 E2F1 JASPAR yes 21814611 1558 21057147
chr10 21816178 21816834 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21814611 1567 107902731
chr10 21816182 21816492 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21814611 1571 107902732
chr10 21816184 21816189 SP1 TRANSFAC yes 21814611 1573 21057148
chr10 21816185 21816190 SP1 TRANSFAC yes 21814611 1574 21057149
chr10 21816185 21816191 SP1 TRANSFAC yes 21814611 1574 21057150
chr10 21816187 21816382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1576 107902733
chr10 21816189 21816194 ETS2 TRANSFAC yes 21814611 1578 21057151
chr10 21816191 21816205 PLAG1 JASPAR yes 21814611 1580 21057152
chr10 21816193 21816368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1582 107902734
chr10 21816194 21816206 TFAP2A JASPAR yes 21814611 1583 21057153
chr10 21816195 21816204 TFAP2A JASPAR yes 21814611 1584 21057154
chr10 21816197 21816209 ZBTB7B JASPAR yes 21814611 1586 21057155
chr10 21816200 21816215 NR2C2 JASPAR yes 21814611 1589 21057156
chr10 21816201 21816208 SP1 TRANSFAC yes 21814611 1590 21057157
chr10 21816201 21816211 SP1 JASPAR yes 21814611 1590 21057158
chr10 21816202 21816210 SP1 TRANSFAC yes 21814611 1591 21057159
chr10 21816203 21816208 SP1 TRANSFAC yes 21814611 1592 21057160
chr10 21816204 21816209 SP1 TRANSFAC yes 21814611 1593 21057161
chr10 21816204 21816210 SP1 TRANSFAC yes 21814611 1593 21057162
chr10 21816208 21816213 SP1 TRANSFAC yes 21814611 1597 21057163
chr10 21816208 21816215 SP1 TRANSFAC yes 21814611 1597 21057164
chr10 21816208 21816217 SP1 TRANSFAC yes 21814611 1597 21057165
chr10 21816212 21816432 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1601 107902735
chr10 21816220 21816225 SP1 TRANSFAC yes 21814611 1609 21057166
chr10 21816220 21816227 SP1 TRANSFAC yes 21814611 1609 21057167
chr10 21816220 21816231 NRF1 JASPAR yes 21814611 1609 21057168
chr10 21816220 21816444 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21814611 1609 107902736
chr10 21816225 21816499 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1614 107902737
chr10 21816229 21816563 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1618 107902738
chr10 21816234 21816240 PEA3 TRANSFAC yes 21814611 1623 21057169
chr10 21816234 21816245 ELK4 JASPAR yes 21814611 1623 21057170
chr10 21816234 21816245 FLI1 JASPAR yes 21814611 1623 21057171
chr10 21816248 21816449 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1637 107902739
chr10 21816253 21816264 E2F4 JASPAR yes 21814611 1642 21057172
chr10 21816253 21816452 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1642 107902740
chr10 21816254 21816265 E2F1 JASPAR yes 21814611 1643 21057173
chr10 21816259 21816272 TFAP2A JASPAR yes 21814611 1648 21057174
chr10 21816259 21816272 TFAP2B JASPAR yes 21814611 1648 21057175
chr10 21816259 21816272 TFAP2C JASPAR yes 21814611 1648 21057176
chr10 21816270 21816275 SP1 TRANSFAC yes 21814611 1659 21057177
chr10 21816270 21816276 SP1 TRANSFAC yes 21814611 1659 21057178
chr10 21816270 21816277 SP1 TRANSFAC yes 21814611 1659 21057179
chr10 21816276 21816285 SOX9 JASPAR yes 21814611 1665 21057180
chr10 21816322 21816330 SP1 TRANSFAC yes 21814611 1711 21057181
chr10 21816322 21816332 SP1 JASPAR yes 21814611 1711 21057182
chr10 21816324 21816330 MAZ TRANSFAC yes 21814611 1713 21057183
chr10 21816328 21816333 SP1 TRANSFAC yes 21814611 1717 21057184
chr10 21816330 21816343 TFAP2A JASPAR yes 21814611 1719 21057185
chr10 21816330 21816343 TFAP2B JASPAR yes 21814611 1719 21057186
chr10 21816330 21816343 TFAP2C JASPAR yes 21814611 1719 21057187
chr10 21816333 21816342 TFAP2A JASPAR yes 21814611 1722 21057188
chr10 21816333 21816353 ESR1 JASPAR yes 21814611 1722 21057189
chr10 21816337 21816354 ESR1 JASPAR yes 21814611 1726 21057190
chr10 21816346 21816358 ZBTB7B JASPAR yes 21814611 1735 21057191
chr10 21816346 21816358 ZBTB7C JASPAR yes 21814611 1735 21057192
chr10 21816347 21816363 GLIS1 JASPAR yes 21814611 1736 21057193
chr10 21816350 21816364 PLAG1 JASPAR yes 21814611 1739 21057194
chr10 21816372 21816586 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 1761 107902741
chr10 21816397 21816408 NRF1 JASPAR yes 21814611 1786 21057195
chr10 21816403 21816414 E2F1 JASPAR yes 21814611 1792 21057196
chr10 21816411 21816731 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21814611 1800 107902742
chr10 21816421 21816425 ESR1 TRANSFAC yes 21814611 1810 21057197
chr10 21816476 21816996 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21814611 1865 107902743
chr10 21816518 21817134 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 1907 107902744
chr10 21816721 21817337 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21814611 2110 107902745
chr10 21816813 21817317 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 2202 107902746
chr10 21816840 21817216 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 2229 107902747
chr10 21816854 21817244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 2243 107902748
chr10 21816999 21817004 H4TF1 TRANSFAC yes 21814611 2388 21057198
chr10 21817002 21817015 SCRT2 JASPAR yes 21814611 2391 21057199
chr10 21817002 21817017 SCRT1 JASPAR yes 21814611 2391 21057200
chr10 21817006 21817016 MYF6 JASPAR yes 21814611 2395 21057201
chr10 21817031 21817046 LEF1 JASPAR yes 21814611 2420 21057202
chr10 21817071 21817587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 2460 107902749
chr10 21817085 21817089 H4TF2 TRANSFAC yes 21814611 2474 21057203
chr10 21817101 21817105 LFA1 TRANSFAC yes 21814611 2490 21057204
chr10 21817143 21817149 ETS1 JASPAR yes 21814611 2532 21057205
chr10 21817143 21817153 RELA JASPAR yes 21814611 2532 21057206
chr10 21817143 21817153 REL JASPAR yes 21814611 2532 21057207
chr10 21817143 21817154 NFKB1 JASPAR yes 21814611 2532 21057208
chr10 21817145 21817155 TEAD4 JASPAR yes 21814611 2534 21057209
chr10 21817149 21817154 ETS2 TRANSFAC yes 21814611 2538 21057210
chr10 21817157 21817501 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21814611 2546 107902750
chr10 21817162 21817172 EMX1 JASPAR yes 21814611 2551 21057211
chr10 21817162 21817172 HOXB3 JASPAR yes 21814611 2551 21057212
chr10 21817162 21817172 POU6F1 JASPAR yes 21814611 2551 21057213
chr10 21817165 21817169 YY1 TRANSFAC yes 21814611 2554 21057214
chr10 21817212 21817218 TBP TRANSFAC yes 21814611 2601 21057215
SNPs associated with SKIDA1[ENSG00000180592.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr10 20887310 rs61001752 CTGAG C 915097 Esophagus 0.235266 1248919
chr10 21455525 rs4291572 C A 346882 Breast 0.439399 1251511
chr10 22269847 rs10740997 T C 455236 Spleen 0.373717 1256463
chr10 21002534 rs138602146 A AT 799873 Ovary 0.374233 1249306
chr10 21391109 rs17814015 C A 411298 Uterus 0.401668 1251295
chr10 21456321 rs4748754 G C 346086 Liver 0.467853 1251523
chr10 21369910 rs11012516 A C,G 432497 Lung 0.19789 1251059
chr10 21685632 rs7904562 T C 116775 Adrenal 0.29697 1253954
Details of SKIDA1[ENSG00000180592.12]
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Genomic Location chr10:21802407-21814611[-]
TSS 21814611
Gene Name SKIDA1
Ensembl ID ENSG00000180592.12
ENTREZID 387640
Uniprot
Q1XH10
E9PAX1
Protein Name
SKI/DACH domain-containing protein 1
Expression levels of SKIDA1[ENSG00000180592.12]
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