EnhancerDB
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  3. SKA2[ENSG00000182628.8]
Enhancers that regulate SKA2[ENSG00000182628.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 57161025 57174510 enh17253 57232630 58120
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Placenta Muscle (Myoblast) Pancreas Uterus Heart
chr17 57194064 57194075 vista25313 57232630 38555
VISTA
chr17 57200500 57200626 vista25314 57232630 32004
VISTA
chr17 57203741 57203833 vista25315 57232630 28797
VISTA
chr17 57213765 57221639 enh17254 57232630 10991
Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Esophagus Placenta
chr17 57224505 57228717 enh81238 57232630 3913
Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Colon (HCT116)
chr17 57231102 57231481 vista25316 57232630 1149
VISTA
chr17 57231530 57231848 vista25317 57232630 782
VISTA
chr17 57241235 57245605 enh4501 57232630 8605
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Spleen Epithelial (MCF-7)
chr17 57263185 57267335 enh4502 57232630 30555
Blood (Karpas-422)
chr17 57276702 57276986 vista25318 57232630 44072
VISTA
chr17 57298532 57298798 vista25319 57232630 65902
VISTA
chr17 57330185 57334335 enh108672 57232630 97555
Lung (PC-9)
Transcript facotrs that regulate SKA2[ENSG00000182628.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 57227616 57227630 SPIC JASPAR yes 57232630 5000 55043501
chr17 57227624 57227630 TCF4 TRANSFAC yes 57232630 5000 55043502
chr17 57227631 57227634 MYB TRANSFAC yes 57232630 4996 55043503
chr17 57227642 57227649 NKX3-1 JASPAR yes 57232630 4981 55043504
chr17 57227643 57227657 SPIC JASPAR yes 57232630 4973 55043505
chr17 57227644 57227665 IRF1 JASPAR yes 57232630 4965 55043506
chr17 57227646 57227661 PRDM1 JASPAR yes 57232630 4969 55043507
chr17 57227646 57227661 STAT2 JASPAR yes 57232630 4969 55043508
chr17 57227648 57227662 IRF7 JASPAR yes 57232630 4968 55043509
chr17 57227653 57227657 YY1 TRANSFAC yes 57232630 4973 55043510
chr17 57227657 57227668 NFIL3 JASPAR yes 57232630 4962 55043511
chr17 57227660 57227664 TEAD2 TRANSFAC yes 57232630 4966 55043512
chr17 57227667 57227672 GATA1 TRANSFAC yes 57232630 4958 55043513
chr17 57227672 57227682 HOXB13 JASPAR yes 57232630 4948 55043514
chr17 57227672 57227682 HOXD13 JASPAR yes 57232630 4948 55043515
chr17 57227685 57227689 YY1 TRANSFAC yes 57232630 4941 55043516
chr17 57227694 57227715 MAFG JASPAR yes 57232630 4915 55043517
chr17 57227700 57227711 FOXH1 JASPAR yes 57232630 4919 55043518
chr17 57227704 57227710 ZNF354C JASPAR yes 57232630 4920 55043519
chr17 57227716 57227721 GATA1 TRANSFAC yes 57232630 4909 55043520
chr17 57227720 57227734 POU1F1 JASPAR yes 57232630 4896 55043521
chr17 57227737 57227748 FOXA1 JASPAR yes 57232630 4882 55043522
chr17 57227739 57227751 FOXI1 JASPAR yes 57232630 4879 55043523
chr17 57227768 57227785 BCL6B JASPAR yes 57232630 4845 55043524
chr17 57227769 57227773 YY1 TRANSFAC yes 57232630 4857 55043525
chr17 57227770 57227778 FEV JASPAR yes 57232630 4852 55043526
chr17 57227778 57227789 FOXH1 JASPAR yes 57232630 4841 55043527
chr17 57227793 57227796 MYB TRANSFAC yes 57232630 4834 55043528
chr17 57227797 57227806 VENTX JASPAR yes 57232630 4824 55043529
chr17 57227797 57227807 EN2 JASPAR yes 57232630 4823 55043530
chr17 57227797 57227807 ESX1 JASPAR yes 57232630 4823 55043531
chr17 57227797 57227807 GBX1 JASPAR yes 57232630 4823 55043532
chr17 57227797 57227807 GBX2 JASPAR yes 57232630 4823 55043533
chr17 57227797 57227807 GSX1 JASPAR yes 57232630 4823 55043534
chr17 57227797 57227807 GSX2 JASPAR yes 57232630 4823 55043535
chr17 57227797 57227807 HESX1 JASPAR yes 57232630 4823 55043536
chr17 57227797 57227807 HOXB3 JASPAR yes 57232630 4823 55043537
chr17 57227797 57227807 LBX2 JASPAR yes 57232630 4823 55043538
chr17 57227797 57227807 LHX2 JASPAR yes 57232630 4823 55043539
chr17 57227797 57227807 MIXL1 JASPAR yes 57232630 4823 55043540
chr17 57227797 57227807 MNX1 JASPAR yes 57232630 4823 55043541
chr17 57227797 57227807 RAX JASPAR yes 57232630 4823 55043542
chr17 57227798 57227802 H1TF2 TRANSFAC yes 57232630 4828 55043543
chr17 57227798 57227802 NFE TRANSFAC yes 57232630 4828 55043544
chr17 57227798 57227802 SRF TRANSFAC yes 57232630 4828 55043545
chr17 57227798 57227806 BARX1 JASPAR yes 57232630 4824 55043546
chr17 57227798 57227806 BSX JASPAR yes 57232630 4824 55043547
chr17 57227798 57227806 DLX6 JASPAR yes 57232630 4824 55043548
chr17 57227798 57227806 ISX JASPAR yes 57232630 4824 55043549
chr17 57227798 57227806 LBX1 JASPAR yes 57232630 4824 55043550
chr17 57227798 57227806 LHX9 JASPAR yes 57232630 4824 55043551
chr17 57227798 57227806 MSX1 JASPAR yes 57232630 4824 55043552
chr17 57227798 57227806 MSX2 JASPAR yes 57232630 4824 55043553
chr17 57227798 57227806 NKX6-2 JASPAR yes 57232630 4824 55043554
chr17 57227798 57227806 PRRX1 JASPAR yes 57232630 4824 55043555
chr17 57227798 57227806 RAX2 JASPAR yes 57232630 4824 55043556
chr17 57227798 57227806 SHOX JASPAR yes 57232630 4824 55043557
chr17 57227798 57227806 UNCX JASPAR yes 57232630 4824 55043558
chr17 57227810 57227831 REST JASPAR yes 57232630 4799 55043559
chr17 57227811 57227830 REST JASPAR yes 57232630 4800 55043560
chr17 57227826 57227839 SMAD2 JASPAR yes 57232630 4791 55043561
chr17 57227827 57227840 EOMES JASPAR yes 57232630 4790 55043562
chr17 57227829 57227839 TBR1 JASPAR yes 57232630 4791 55043563
chr17 57227829 57227840 TBX20 JASPAR yes 57232630 4790 55043564
chr17 57227829 57227840 TBX2 JASPAR yes 57232630 4790 55043565
chr17 57227830 57227840 TBX21 JASPAR yes 57232630 4790 55043566
chr17 57227831 57227839 MGA JASPAR yes 57232630 4791 55043567
chr17 57227831 57227839 TBX15 JASPAR yes 57232630 4791 55043568
chr17 57227831 57227839 TBX1 JASPAR yes 57232630 4791 55043569
chr17 57227831 57227839 TBX4 JASPAR yes 57232630 4791 55043570
chr17 57227831 57227839 TBX5 JASPAR yes 57232630 4791 55043571
chr17 57227838 57227842 TEAD2 TRANSFAC yes 57232630 4788 55043572
chr17 57227839 57227847 RHOXF1 JASPAR yes 57232630 4783 55043573
chr17 57227924 57227928 NFE TRANSFAC yes 57232630 4702 55043574
chr17 57227939 57227950 STAT3 JASPAR yes 57232630 4680 55043575
chr17 57227959 57227979 TP63 JASPAR yes 57232630 4651 55043576
chr17 57227960 57227978 TP53 JASPAR yes 57232630 4652 55043577
chr17 57227960 57227978 TP63 JASPAR yes 57232630 4652 55043578
chr17 57227960 57227978 TP73 JASPAR yes 57232630 4652 55043579
chr17 57227961 57227981 TP53 JASPAR yes 57232630 4649 55043580
chr17 57227976 57227988 ZBTB7A JASPAR yes 57232630 4642 55043581
chr17 57227981 57227985 H4TF2 TRANSFAC yes 57232630 4645 55043582
chr17 57227996 57228017 ZNF263 JASPAR yes 57232630 4613 55043583
chr17 57228003 57228010 CEBPA TRANSFAC yes 57232630 4620 55043584
chr17 57228004 57228015 E2F6 JASPAR yes 57232630 4615 55043585
chr17 57228010 57228020 GSC JASPAR yes 57232630 4610 55043586
chr17 57228011 57228019 OTX2 JASPAR yes 57232630 4611 55043587
chr17 57228037 57228056 PAX5 JASPAR yes 57232630 4574 55043588
chr17 57228052 57228055 MYB TRANSFAC yes 57232630 4575 55043589
chr17 57228077 57228081 LFA1 TRANSFAC yes 57232630 4549 55043590
chr17 57228095 57228099 NFE TRANSFAC yes 57232630 4531 55043591
chr17 57228098 57228109 EBF1 JASPAR yes 57232630 4521 55043592
chr17 57228123 57228127 LFA1 TRANSFAC yes 57232630 4503 55043593
chr17 57228123 57228143 TP63 JASPAR yes 57232630 4487 55043594
chr17 57228130 57228133 MYB TRANSFAC yes 57232630 4497 55043595
chr17 57228157 57228166 SRY JASPAR yes 57232630 4464 55043596
chr17 57228159 57228167 FOXO3 JASPAR yes 57232630 4463 55043597
chr17 57228159 57228169 NFATC3 JASPAR yes 57232630 4461 55043598
chr17 57228159 57228175 RFX2 JASPAR yes 57232630 4455 55043599
chr17 57228159 57228175 RFX4 JASPAR yes 57232630 4455 55043600
chr17 57228173 57228177 H1TF2 TRANSFAC yes 57232630 4453 55043601
chr17 57228173 57228177 NFE TRANSFAC yes 57232630 4453 55043602
chr17 57228173 57228177 SRF TRANSFAC yes 57232630 4453 55043603
chr17 57228173 57228188 MAFK JASPAR yes 57232630 4442 55043604
chr17 57228179 57228190 HOXC11 JASPAR yes 57232630 4440 55043605
chr17 57228179 57228190 HOXC13 JASPAR yes 57232630 4440 55043606
chr17 57228179 57228190 HOXD12 JASPAR yes 57232630 4440 55043607
chr17 57228180 57228189 CDX1 JASPAR yes 57232630 4441 55043608
chr17 57228180 57228190 HOXC10 JASPAR yes 57232630 4440 55043609
chr17 57228180 57228190 HOXD11 JASPAR yes 57232630 4440 55043610
chr17 57228191 57228201 HOXB13 JASPAR yes 57232630 4429 55043611
chr17 57228193 57228208 IRF9 JASPAR yes 57232630 4422 55043612
chr17 57228208 57228215 MEIS1 JASPAR yes 57232630 4415 55043613
chr17 57228208 57228216 MEIS2 JASPAR yes 57232630 4414 55043614
chr17 57228218 57228222 NFE TRANSFAC yes 57232630 4408 55043615
chr17 57228219 57228224 GATA2 JASPAR yes 57232630 4406 55043616
chr17 57228220 57228232 FOXI1 JASPAR yes 57232630 4398 55043617
chr17 57228224 57228236 HLF JASPAR yes 57232630 4394 55043618
chr17 57228225 57228246 IRF1 JASPAR yes 57232630 4384 55043619
chr17 57228226 57228237 NFIL3 JASPAR yes 57232630 4393 55043620
chr17 57228231 57228234 MYB TRANSFAC yes 57232630 4396 55043621
chr17 57228238 57228247 LEF1 TRANSFAC yes 57232630 4383 55043622
chr17 57228249 57228253 TEAD2 TRANSFAC yes 57232630 4377 55043623
chr17 57228249 57228254 TBP TRANSFAC yes 57232630 4376 55043624
chr17 57228256 57228267 FOS JASPAR yes 57232630 4363 55043625
chr17 57228256 57228267 JUND JASPAR yes 57232630 4363 55043626
chr17 57228257 57228266 JDP2 JASPAR yes 57232630 4364 55043627
chr17 57228257 57228268 JUNB JASPAR yes 57232630 4362 55043628
chr17 57228257 57228270 HNF1B JASPAR yes 57232630 4360 55043629
chr17 57228257 57228271 JUN JASPAR yes 57232630 4359 55043630
chr17 57228258 57228269 BATF JASPAR yes 57232630 4361 55043631
chr17 57228263 57228267 YY1 TRANSFAC yes 57232630 4363 55043632
chr17 57228269 57228286 ZNF410 JASPAR yes 57232630 4344 55043633
chr17 57228278 57228281 MYB TRANSFAC yes 57232630 4349 55043634
chr17 57228290 57228294 TEAD2 TRANSFAC yes 57232630 4336 55043635
chr17 57228290 57228295 TBP TRANSFAC yes 57232630 4335 55043636
chr17 57228290 57228296 TFIID TRANSFAC yes 57232630 4334 55043637
chr17 57228292 57228298 TBP TRANSFAC yes 57232630 4332 55043638
chr17 57228299 57228319 TP53 JASPAR yes 57232630 4311 55043639
chr17 57228312 57228323 CEBPB JASPAR yes 57232630 4307 55043640
chr17 57228312 57228324 HLF JASPAR yes 57232630 4306 55043641
chr17 57228330 57228344 ONECUT3 JASPAR yes 57232630 4286 55043642
chr17 57228333 57228342 SRY JASPAR yes 57232630 4288 55043643
chr17 57228338 57228348 HOXB13 JASPAR yes 57232630 4282 55043644
chr17 57228338 57228348 HOXD13 JASPAR yes 57232630 4282 55043645
chr17 57228338 57228349 HOXA10 JASPAR yes 57232630 4281 55043646
chr17 57228339 57228349 ALX3 JASPAR yes 57232630 4281 55043647
chr17 57228339 57228349 EMX2 JASPAR yes 57232630 4281 55043648
chr17 57228339 57228349 ESX1 JASPAR yes 57232630 4281 55043649
chr17 57228339 57228349 GBX2 JASPAR yes 57232630 4281 55043650
chr17 57228339 57228349 GSX1 JASPAR yes 57232630 4281 55043651
chr17 57228339 57228349 GSX2 JASPAR yes 57232630 4281 55043652
chr17 57228339 57228349 HESX1 JASPAR yes 57232630 4281 55043653
chr17 57228339 57228349 HOXB2 JASPAR yes 57232630 4281 55043654
chr17 57228339 57228349 HOXB3 JASPAR yes 57232630 4281 55043655
chr17 57228339 57228349 LBX2 JASPAR yes 57232630 4281 55043656
chr17 57228339 57228349 LHX2 JASPAR yes 57232630 4281 55043657
chr17 57228339 57228349 LHX6 JASPAR yes 57232630 4281 55043658
chr17 57228339 57228349 MEOX1 JASPAR yes 57232630 4281 55043659
chr17 57228339 57228349 MEOX2 JASPAR yes 57232630 4281 55043660
chr17 57228339 57228349 MIXL1 JASPAR yes 57232630 4281 55043661
chr17 57228339 57228349 MNX1 JASPAR yes 57232630 4281 55043662
chr17 57228339 57228349 NOTO JASPAR yes 57232630 4281 55043663
chr17 57228339 57228349 POU6F1 JASPAR yes 57232630 4281 55043664
chr17 57228339 57228349 RAX JASPAR yes 57232630 4281 55043665
chr17 57228340 57228348 BSX JASPAR yes 57232630 4282 55043666
chr17 57228340 57228348 DLX6 JASPAR yes 57232630 4282 55043667
chr17 57228340 57228348 EN1 JASPAR yes 57232630 4282 55043668
chr17 57228340 57228348 ISX JASPAR yes 57232630 4282 55043669
chr17 57228340 57228348 LBX1 JASPAR yes 57232630 4282 55043670
chr17 57228340 57228348 LHX9 JASPAR yes 57232630 4282 55043671
chr17 57228340 57228348 LMX1A JASPAR yes 57232630 4282 55043672
chr17 57228340 57228348 LMX1B JASPAR yes 57232630 4282 55043673
chr17 57228340 57228348 NKX6-1 JASPAR yes 57232630 4282 55043674
chr17 57228340 57228348 NKX6-2 JASPAR yes 57232630 4282 55043675
chr17 57228340 57228348 PAX4 JASPAR yes 57232630 4282 55043676
chr17 57228340 57228348 PDX1 JASPAR yes 57232630 4282 55043677
chr17 57228340 57228348 PRRX1 JASPAR yes 57232630 4282 55043678
chr17 57228340 57228348 RAX2 JASPAR yes 57232630 4282 55043679
chr17 57228340 57228348 SHOX JASPAR yes 57232630 4282 55043680
chr17 57228340 57228348 UNCX JASPAR yes 57232630 4282 55043681
chr17 57228340 57228348 VAX1 JASPAR yes 57232630 4282 55043682
chr17 57228340 57228348 VAX2 JASPAR yes 57232630 4282 55043683
chr17 57228340 57228348 VSX1 JASPAR yes 57232630 4282 55043684
chr17 57228340 57228348 VSX2 JASPAR yes 57232630 4282 55043685
chr17 57228340 57228350 POU6F2 JASPAR yes 57232630 4280 55043686
chr17 57228341 57228351 PAX3 JASPAR yes 57232630 4279 55043687
chr17 57228341 57228351 PAX7 JASPAR yes 57232630 4279 55043688
chr17 57228341 57228352 PHOX2A JASPAR yes 57232630 4278 55043689
chr17 57228343 57228353 HMBOX1 JASPAR yes 57232630 4277 55043690
chr17 57228352 57228367 STAT2 JASPAR yes 57232630 4263 55043691
chr17 57228358 57228373 FOXP1 JASPAR yes 57232630 4257 55043692
chr17 57228400 57228403 MYB TRANSFAC yes 57232630 4227 55043693
chr17 57228401 57228416 SOX21 JASPAR yes 57232630 4214 55043694
chr17 57228406 57228410 YY1 TRANSFAC yes 57232630 4220 55043695
chr17 57228413 57228428 RFX5 JASPAR yes 57232630 4202 55043696
chr17 57228423 57228429 SOX10 JASPAR yes 57232630 4201 55043697
chr17 57228432 57228448 POU4F3 JASPAR yes 57232630 4182 55043698
chr17 57228434 57228448 POU4F1 JASPAR yes 57232630 4182 55043699
chr17 57228434 57228449 HNF1A JASPAR yes 57232630 4181 55043700
chr17 57228435 57228448 HNF1B JASPAR yes 57232630 4182 55043701
chr17 57228435 57228449 POU4F1 JASPAR yes 57232630 4181 55043702
chr17 57228439 57228451 FOXC2 JASPAR yes 57232630 4179 55043703
chr17 57228439 57228453 FOXF2 JASPAR yes 57232630 4177 55043704
chr17 57228440 57228451 FOXB1 JASPAR yes 57232630 4179 55043705
chr17 57228440 57228451 FOXC1 JASPAR yes 57232630 4179 55043706
chr17 57228441 57228445 YY1 TRANSFAC yes 57232630 4185 55043707
chr17 57228459 57228474 LEF1 JASPAR yes 57232630 4156 55043708
chr17 57228491 57228502 SPDEF JASPAR yes 57232630 4128 55043709
chr17 57228514 57228529 SOX21 JASPAR yes 57232630 4101 55043710
chr17 57228551 57228562 CDX2 JASPAR yes 57232630 4068 55043711
chr17 57228552 57228563 HOXA10 JASPAR yes 57232630 4067 55043712
chr17 57228553 57228562 CDX1 JASPAR yes 57232630 4068 55043713
chr17 57228593 57228598 ETS2 TRANSFAC yes 57232630 4032 55043714
chr17 57228620 57228634 PAX6 JASPAR yes 57232630 3996 55043715
chr17 57228654 57228666 YY1 JASPAR yes 57232630 3964 55043716
chr17 57228659 57228663 YY1 TRANSFAC yes 57232630 3967 55043717
chr17 57228679 57228693 IRF7 JASPAR yes 57232630 3937 55043718
chr17 57228681 57228696 RUNX2 JASPAR yes 57232630 3934 55043719
chr17 57228693 57228697 YY1 TRANSFAC yes 57232630 3933 55043720
chr17 57228703 57228715 FOXC2 JASPAR yes 57232630 3915 55043721
chr17 57228704 57228715 FOXC1 JASPAR yes 57232630 3915 55043722
chr17 57230406 57231674 ZNF143 GTRD no Epithelial (MCF-7) 57232630 956 108275692
chr17 57230406 57231674 ZNF143 GTRD no Epithelial (MCF-7) 57232630 956 108275693
chr17 57230452 57232998 ZNF143 GTRD no Epithelial (MCF-7) 57232630 368 108275694
chr17 57230452 57232998 ZNF143 GTRD no Epithelial (MCF-7) 57232630 368 108275695
chr17 57230490 57231832 ZNF143 GTRD no Epithelial (MCF-7) 57232630 798 108275696
chr17 57230490 57231832 ZNF143 GTRD no Epithelial (MCF-7) 57232630 798 108275697
chr17 57230625 57231129 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1501 108275698
chr17 57230663 57231721 ZNF143 GTRD no Epithelial (MCF-7) 57232630 909 108275699
chr17 57230663 57231721 ZNF143 GTRD no Epithelial (MCF-7) 57232630 909 108275700
chr17 57230725 57231344 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1286 108275701
chr17 57230781 57231547 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1083 108275702
chr17 57230781 57231547 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1083 108275703
chr17 57230783 57231516 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1114 108275704
chr17 57230803 57231666 ZNF143 GTRD no Epithelial (MCF-7) 57232630 964 108275705
chr17 57230803 57231666 ZNF143 GTRD no Epithelial (MCF-7) 57232630 964 108275706
chr17 57230806 57231491 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1139 108275707
chr17 57230848 57231586 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1044 108275708
chr17 57230848 57231586 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1044 108275709
chr17 57230872 57231660 ZNF143 GTRD no Epithelial (MCF-7) 57232630 970 108275710
chr17 57230872 57231660 ZNF143 GTRD no Epithelial (MCF-7) 57232630 970 108275711
chr17 57230890 57231454 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1176 108275712
chr17 57230901 57231368 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1262 108275713
chr17 57230920 57231480 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1150 108275714
chr17 57230932 57231388 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1242 108275715
chr17 57230956 57231330 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1300 108275716
chr17 57231028 57231284 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 57232630 1346 108275717
chr17 57231037 57231473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 1157 108275718
chr17 57231040 57231377 ZNF143 GTRD no Epithelial (MCF-7) 57232630 1253 108275719
chr17 57231057 57231367 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 57232630 1263 108275720
chr17 57231111 57231123 PROX1 JASPAR yes 57232630 1507 21263656
chr17 57231116 57231131 PRDM1 JASPAR yes 57232630 1499 21263657
chr17 57231118 57231130 IRF1 JASPAR yes 57232630 1500 21263658
chr17 57231132 57231145 DUXA JASPAR yes 57232630 1485 21263659
chr17 57231133 57231144 DUX4 JASPAR yes 57232630 1486 21263660
chr17 57231140 57231155 FOXP1 JASPAR yes 57232630 1475 21263661
chr17 57231142 57231157 FOXP1 JASPAR yes 57232630 1473 21263662
chr17 57231143 57231158 FOXP1 JASPAR yes 57232630 1472 21263663
chr17 57231167 57231171 NFE TRANSFAC yes 57232630 1459 21263664
chr17 57231200 57231217 ESR1 JASPAR yes 57232630 1413 21263665
chr17 57231273 57231285 HES5 JASPAR yes 57232630 1345 21263666
chr17 57231273 57231285 HES7 JASPAR yes 57232630 1345 21263667
chr17 57231274 57231284 HEY1 JASPAR yes 57232630 1346 21263668
chr17 57231274 57231284 HEY2 JASPAR yes 57232630 1346 21263669
chr17 57231281 57231287 YY1 JASPAR yes 57232630 1343 21263670
chr17 57231284 57231303 PAX5 JASPAR yes 57232630 1327 21263671
chr17 57231285 57231293 MGA JASPAR yes 57232630 1337 21263672
chr17 57231285 57231293 TBX15 JASPAR yes 57232630 1337 21263673
chr17 57231285 57231293 TBX1 JASPAR yes 57232630 1337 21263674
chr17 57231285 57231293 TBX4 JASPAR yes 57232630 1337 21263675
chr17 57231285 57231293 TBX5 JASPAR yes 57232630 1337 21263676
chr17 57231296 57231307 PROP1 JASPAR yes 57232630 1323 21263677
chr17 57231296 57231317 IRF1 JASPAR yes 57232630 1313 21263678
chr17 57231298 57231313 FOXP1 JASPAR yes 57232630 1317 21263679
chr17 57231301 57231316 MEF2A JASPAR yes 57232630 1314 21263680
chr17 57231302 57231317 MEF2C JASPAR yes 57232630 1313 21263681
chr17 57231303 57231315 MEF2A JASPAR yes 57232630 1315 21263682
chr17 57231303 57231315 MEF2B JASPAR yes 57232630 1315 21263683
chr17 57231303 57231315 MEF2D JASPAR yes 57232630 1315 21263684
chr17 57231304 57231314 MEF2A JASPAR yes 57232630 1316 21263685
chr17 57231305 57231309 YY1 TRANSFAC yes 57232630 1321 21263686
chr17 57231323 57231334 CEBPB JASPAR yes 57232630 1296 21263687
chr17 57231326 57231338 YY1 JASPAR yes 57232630 1292 21263688
chr17 57231355 57231368 NR2F1 JASPAR yes 57232630 1262 21263689
chr17 57231371 57231376 SP1 TRANSFAC yes 57232630 1254 21263690
chr17 57231374 57231388 PLAG1 JASPAR yes 57232630 1242 21263691
chr17 57231395 57233307 E2F1 UCSC Txn Factor no Conserved 57232630 677 108275721
chr17 57231395 57233307 E2F1 UCSC Txn Factor no Conserved 57232630 677 108275722
chr17 57231395 57233307 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 57232630 677 108275723
chr17 57231395 57233307 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 57232630 677 108275724
chr17 57231410 57231421 FOSL2 JASPAR yes 57232630 1209 21263692
chr17 57231423 57231439 NFYA JASPAR yes 57232630 1191 21263693
chr17 57231428 57231432 H1TF2 TRANSFAC yes 57232630 1198 21263694
chr17 57231428 57231432 NFE TRANSFAC yes 57232630 1198 21263695
chr17 57231428 57231432 SRF TRANSFAC yes 57232630 1198 21263696
chr17 57231435 57231439 YY1 TRANSFAC yes 57232630 1191 21263697
chr17 57231439 57231442 MYB TRANSFAC yes 57232630 1188 21263698
chr17 57231444 57231459 FOXP1 JASPAR yes 57232630 1171 21263699
chr17 57231445 57231456 FOXA1 JASPAR yes 57232630 1174 21263700
chr17 57231445 57231764 ZNF143 GTRD no Epithelial (MCF-7) 57232630 866 108275725
chr17 57231445 57231764 ZNF143 GTRD no Epithelial (MCF-7) 57232630 866 108275726
chr17 57231446 57231458 FOXC2 JASPAR yes 57232630 1172 21263701
chr17 57231446 57231466 RREB1 JASPAR yes 57232630 1164 21263702
chr17 57231450 57231470 RREB1 JASPAR yes 57232630 1160 21263703
chr17 57231451 57231463 FOXI1 JASPAR yes 57232630 1167 21263704
chr17 57231487 57233490 POLR2A UCSC Txn Factor no Conserved 57232630 860 108275727
chr17 57231531 57231546 FOXP1 JASPAR yes 57232630 1084 21263705
chr17 57231532 57231547 FOXP1 JASPAR yes 57232630 1083 21263706
chr17 57231532 57231553 IRF1 JASPAR yes 57232630 1077 21263707
chr17 57231533 57231548 FOXP1 JASPAR yes 57232630 1082 21263708
chr17 57231533 57231554 IRF1 JASPAR yes 57232630 1076 21263709
chr17 57231534 57231549 FOXP1 JASPAR yes 57232630 1081 21263710
chr17 57231536 57231551 FOXP1 JASPAR yes 57232630 1079 21263711
chr17 57231537 57231558 IRF1 JASPAR yes 57232630 1072 21263712
chr17 57231538 57231553 FOXP1 JASPAR yes 57232630 1077 21263713
chr17 57231538 57231559 IRF1 JASPAR yes 57232630 1071 21263714
chr17 57231539 57231943 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 687 108275728
chr17 57231542 57231563 IRF1 JASPAR yes 57232630 1067 21263715
chr17 57231543 57231558 FOXP1 JASPAR yes 57232630 1072 21263716
chr17 57231543 57231564 IRF1 JASPAR yes 57232630 1066 21263717
chr17 57231547 57231562 STAT2 JASPAR yes 57232630 1068 21263718
chr17 57231547 57231568 IRF1 JASPAR yes 57232630 1062 21263719
chr17 57231548 57231563 FOXP1 JASPAR yes 57232630 1067 21263720
chr17 57231548 57231569 IRF1 JASPAR yes 57232630 1061 21263721
chr17 57231549 57231570 IRF1 JASPAR yes 57232630 1060 21263722
chr17 57231553 57231568 FOXP1 JASPAR yes 57232630 1062 21263723
chr17 57231563 57232019 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 57232630 611 108275729
chr17 57231568 57231583 MAFK JASPAR yes 57232630 1047 21263724
chr17 57231591 57232788 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 57232630 158 108275730
chr17 57231611 57231618 SPIB JASPAR yes 57232630 1012 21263725
chr17 57231622 57231630 SP1 TRANSFAC yes 57232630 1000 21263726
chr17 57231646 57231667 ZNF263 JASPAR yes 57232630 963 21263727
chr17 57231653 57231659 MAZ TRANSFAC yes 57232630 971 21263728
chr17 57231653 57231664 E2F6 JASPAR yes 57232630 966 21263729
chr17 57231655 57231663 SP1 TRANSFAC yes 57232630 967 21263730
chr17 57231655 57231676 ZNF263 JASPAR yes 57232630 954 21263731
chr17 57231657 57231663 MAZ TRANSFAC yes 57232630 967 21263732
chr17 57231657 57231668 E2F6 JASPAR yes 57232630 962 21263733
chr17 57231674 57232078 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 57232630 552 108275731
chr17 57231683 57232689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 57232630 59 108275732
chr17 57231698 57231712 RORA JASPAR yes 57232630 918 21263734
chr17 57231706 57231716 NFKB1 JASPAR yes 57232630 914 21263735
chr17 57231710 57232174 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 57232630 456 108275733
chr17 57231711 57231725 GLIS2 JASPAR yes 57232630 905 21263736
chr17 57231711 57231725 ZIC1 JASPAR yes 57232630 905 21263737
chr17 57231711 57231726 ZIC4 JASPAR yes 57232630 904 21263738
chr17 57231714 57231726 NHLH1 JASPAR yes 57232630 904 21263739
chr17 57231714 57232050 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 57232630 580 108275734
chr17 57231723 57231735 ZBTB7A JASPAR yes 57232630 895 21263740
chr17 57231724 57231736 ZBTB7B JASPAR yes 57232630 894 21263741
chr17 57231724 57231736 ZBTB7C JASPAR yes 57232630 894 21263742
chr17 57231726 57232296 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 57232630 334 108275735
chr17 57231728 57232077 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 57232630 553 108275736
chr17 57231732 57231962 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 668 108275737
chr17 57231747 57232129 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 501 108275738
chr17 57231771 57231775 H1TF2 TRANSFAC yes 57232630 855 21263743
chr17 57231771 57231775 NFE TRANSFAC yes 57232630 855 21263744
chr17 57231771 57231775 SRF TRANSFAC yes 57232630 855 21263745
chr17 57231779 57232014 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 616 108275739
chr17 57231779 57232235 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 57232630 395 108275740
chr17 57231797 57231811 PAX6 JASPAR yes 57232630 819 21263746
chr17 57231798 57231996 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 57232630 634 108275741
chr17 57231798 57232042 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 588 108275742
chr17 57231803 57231818 PRDM1 JASPAR yes 57232630 812 21263747
chr17 57231808 57231814 TCF4 TRANSFAC yes 57232630 816 21263748
chr17 57231813 57232313 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 57232630 317 108275743
chr17 57231826 57231963 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 57232630 667 108275744
chr17 57231836 57231917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 713 108275745
chr17 57231837 57232347 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 57232630 283 108275746
chr17 57231837 57232878 ZNF143 GTRD no Epithelial (MCF-7) 57232630 248 108275747
chr17 57231843 57231847 NFE TRANSFAC yes 57232630 783 21263749
SNPs associated with SKA2[ENSG00000182628.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 57220124 rs77403093 C T 0 Esophagus 2.55309e-12 4958133
chr17 57038282 rs2036730 A G 149030 Heart 0.00490578 4957691
chr17 56711542 rs596714 G A 475770 Heart 0.187642 4956979
chr17 57276563 rs493740 G C 43933 Thyroid 0.00264595 4958319
chr17 57379922 rs8066718 C G 147292 Liver 0.426229 4958769
chr17 57375167 rs12601428 C G,T 142537 Adrenal 0.157903 4958696
Details of SKA2[ENSG00000182628.8]
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Genomic Location chr17:57187312-57232630[-]
TSS 57232630
Gene Name SKA2
Ensembl ID ENSG00000182628.8
ENTREZID 348235
Uniprot
J3KSP0
Q8WVK7
Protein Name
isoform CRA_c
isoform CRA_d
member A
member A
Family with sequence similarity 33
Family with sequence similarity 33
Spindle and kinetochore-associated protein 2
Expression levels of SKA2[ENSG00000182628.8]
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