EnhancerDB
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Enhancers that regulate HAPLN4[ENSG00000187664.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 19268888 19273938 enh87105 19373605 99667
Blood (GM12878)
chr19 19281005 19286355 enh5057 19373605 87250
Blood (Karpas-422)
chr19 19370628 19370854 vista28957 19373605 2751
VISTA
chr19 19410078 19410150 vista28958 19373605 36473
VISTA
chr19 19432213 19432594 vista28959 19373605 58608
VISTA
chr19 19432680 19432782 vista28960 19373605 59075
VISTA
chr19 19469925 19491175 enh5058 19373605 96320
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript facotrs that regulate HAPLN4[ENSG00000187664.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 19370014 19370684 TCF7L2 GTRD no Colon (HCT116) 19373605 2921 108400333
chr19 19370542 19370842 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2763 108400334
chr19 19370560 19370944 USF1 UCSC Txn Factor no Conserved 19373605 2661 108400335
chr19 19370560 19370944 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 19373605 2661 108400336
chr19 19370563 19370893 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2712 108400337
chr19 19370564 19370944 NFYB UCSC Txn Factor no Conserved 19373605 2661 108400338
chr19 19370564 19370944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 19373605 2661 108400339
chr19 19370568 19370944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19373605 2661 108400340
chr19 19370586 19370906 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 19373605 2699 108400341
chr19 19370590 19370860 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2745 108400342
chr19 19370590 19370889 USF2 UCSC Txn Factor no Conserved 19373605 2716 108400343
chr19 19370592 19370922 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2683 108400344
chr19 19370592 19370948 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2657 108400345
chr19 19370592 19370957 RFX5 UCSC Txn Factor no Conserved 19373605 2648 108400346
chr19 19370597 19370861 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19373605 2744 108400347
chr19 19370597 19370921 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2684 108400348
chr19 19370599 19370889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19373605 2716 108400349
chr19 19370603 19370873 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2732 108400350
chr19 19370605 19370929 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2676 108400351
chr19 19370606 19370847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2758 108400352
chr19 19370607 19370867 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 19373605 2738 108400353
chr19 19370618 19370860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2745 108400354
chr19 19370621 19370957 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 19373605 2648 108400355
chr19 19370623 19370887 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19373605 2718 108400356
chr19 19370630 19370634 H1TF2 TRANSFAC yes 19373605 2971 70824619
chr19 19370630 19370634 NFE TRANSFAC yes 19373605 2971 70824620
chr19 19370630 19370634 SRF TRANSFAC yes 19373605 2971 70824621
chr19 19370631 19370895 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19373605 2710 108400357
chr19 19370636 19370849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2756 108400358
chr19 19370640 19370646 MAZ TRANSFAC yes 19373605 2959 70824622
chr19 19370640 19370651 E2F6 JASPAR yes 19373605 2954 70824623
chr19 19370648 19370663 MEF2C JASPAR yes 19373605 2942 70824624
chr19 19370651 19370901 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2704 108400359
chr19 19370653 19370827 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19373605 2778 108400360
chr19 19370660 19370874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19373605 2731 108400361
chr19 19370663 19370673 SP1 JASPAR yes 19373605 2932 70824625
chr19 19370663 19370817 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19373605 2788 108400362
chr19 19370664 19370674 SP1 JASPAR yes 19373605 2931 70824626
chr19 19370672 19370687 TFAP2C JASPAR yes 19373605 2918 70824627
chr19 19370673 19370692 REST JASPAR yes 19373605 2913 70824628
chr19 19370682 19370697 NFYB JASPAR yes 19373605 2908 70824629
chr19 19370684 19370697 DUXA JASPAR yes 19373605 2908 70824630
chr19 19370684 19370700 NFYA JASPAR yes 19373605 2905 70824631
chr19 19370685 19370696 DUX4 JASPAR yes 19373605 2909 70824632
chr19 19370685 19370703 NFYA JASPAR yes 19373605 2902 70824633
chr19 19370687 19370806 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 19373605 2799 108400363
chr19 19370687 19370821 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19373605 2784 108400364
chr19 19370689 19370693 H1TF2 TRANSFAC yes 19373605 2912 70824634
chr19 19370689 19370693 NFE TRANSFAC yes 19373605 2912 70824635
chr19 19370689 19370693 SRF TRANSFAC yes 19373605 2912 70824636
chr19 19370716 19370732 NFYA JASPAR yes 19373605 2873 70824637
chr19 19370719 19370732 DUXA JASPAR yes 19373605 2873 70824638
chr19 19370719 19370734 NFYB JASPAR yes 19373605 2871 70824639
chr19 19370720 19370731 DUX4 JASPAR yes 19373605 2874 70824640
chr19 19370721 19370726 NFY TRANSFAC yes 19373605 2879 70824641
chr19 19370721 19371911 ZNF274 GTRD no Cervix (HeLa-S3) 19373605 1694 108400365
chr19 19370731 19370736 MYC TRANSFAC yes 19373605 2869 70824642
chr19 19370733 19370742 HIC2 JASPAR yes 19373605 2863 70824643
chr19 19370736 19370740 LFA1 TRANSFAC yes 19373605 2865 70824644
chr19 19370736 19370747 USF2 JASPAR yes 19373605 2858 70824645
chr19 19370737 19370747 TFEB JASPAR yes 19373605 2858 70824646
chr19 19370737 19370747 TFEC JASPAR yes 19373605 2858 70824647
chr19 19370737 19370748 USF1 JASPAR yes 19373605 2857 70824648
chr19 19370741 19370752 NFE2 JASPAR yes 19373605 2853 70824649
chr19 19370742 19370751 JDP2 JASPAR yes 19373605 2854 70824650
chr19 19370795 19370803 FEV JASPAR yes 19373605 2802 70824651
chr19 19370802 19370817 RFX5 JASPAR yes 19373605 2788 70824652
chr19 19370803 19370808 MYC TRANSFAC yes 19373605 2797 70824653
chr19 19370812 19370833 IRF1 JASPAR yes 19373605 2772 70824654
chr19 19370816 19370821 ETS2 TRANSFAC yes 19373605 2784 70824655
chr19 19370816 19370830 STAT1 JASPAR yes 19373605 2775 70824656
chr19 19370816 19370831 PRDM1 JASPAR yes 19373605 2774 70824657
chr19 19370816 19370831 STAT2 JASPAR yes 19373605 2774 70824658
chr19 19370816 19370834 IRF2 JASPAR yes 19373605 2771 70824659
chr19 19370817 19370829 IRF1 JASPAR yes 19373605 2776 70824660
chr19 19370831 19370846 RUNX2 JASPAR yes 19373605 2759 70824661
chr19 19370834 19370846 GLI2 JASPAR yes 19373605 2759 70824662
SNPs associated with HAPLN4[ENSG00000187664.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of HAPLN4[ENSG00000187664.8]
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Genomic Location chr19:19366450-19373605[-]
TSS 19373605
Gene Name HAPLN4
Ensembl ID ENSG00000187664.8
ENTREZID 404037
Uniprot
Q86UW8
Protein Name
Hyaluronan and proteoglycan link protein 4
Expression levels of HAPLN4[ENSG00000187664.8]
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