EnhancerDB
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  3. LIN28B[ENSG00000187772.6]
Enhancers that regulate LIN28B[ENSG00000187772.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 105344905 105349615 enh23444 105404923 55308
Placenta
chr6 105354005 105360035 enh23445 105404923 44888
Placenta Epithelial (MCF-7)
chr6 105388915 105389637 vista52911 105404923 15286
VISTA
chr6 105401566 105401766 vista52912 105404923 3157
VISTA
chr6 105402548 105402641 vista52913 105404923 2282
VISTA
chr6 105403500 105403904 vista52914 105404923 1019
VISTA
chr6 105410105 105414435 enh9260 105404923 5182
Blood (Karpas-422)
chr6 105414589 105420295 enh72432 105404923 9666
Muscle (A673) Neural Stem Cells (H9)
chr6 105425725 105430495 enh9261 105404923 20802
Blood (Karpas-422)
chr6 105431845 105436795 enh9262 105404923 26922
Blood (Karpas-422)
chr6 105441994 105455615 enh9263 105404923 37071
Thyroid Brain (SK-N-SH) Blood (Karpas-422)
chr6 105443315 105443377 vista52915 105404923 38392
VISTA
chr6 105455625 105471450 enh9264 105404923 50702
Prostate (PC-3) Liver (HepG2) Astrocyte Blood (Karpas-422) Neural Stem Cells (H9)
chr6 105477997 105478373 vista52916 105404923 73074
VISTA
chr6 105479665 105495695 enh9265 105404923 74742
Prostate (PC-3) Liver (HepG2) Astrocyte Lung (A549) Blood (Karpas-422) Neural Stem Cells (H9)
chr6 105497405 105501995 enh23446 105404923 92482
Prostate (PC-3) Placenta Brain (SK-N-MC)
chr6 105503285 105507435 enh9266 105404923 98362
Blood (Karpas-422)
Transcript facotrs that regulate LIN28B[ENSG00000187772.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 105401574 105401589 NR2C2 JASPAR yes 105404923 3334 70407519
chr6 105401577 105401589 INSM1 JASPAR yes 105404923 3334 70407520
chr6 105401597 105401612 ZIC4 JASPAR yes 105404923 3311 70407521
chr6 105401604 105401609 TFAP2A TRANSFAC yes 105404923 3314 70407522
chr6 105401604 105401610 MZF1 JASPAR yes 105404923 3313 70407523
chr6 105401625 105401630 SP1 TRANSFAC yes 105404923 3293 70407524
chr6 105401626 105401631 SP1 TRANSFAC yes 105404923 3292 70407525
chr6 105401630 105401646 RFX2 JASPAR yes 105404923 3277 70407526
chr6 105401630 105401646 RFX3 JASPAR yes 105404923 3277 70407527
chr6 105401630 105401646 RFX4 JASPAR yes 105404923 3277 70407528
chr6 105401630 105401646 RFX5 JASPAR yes 105404923 3277 70407529
chr6 105401636 105401642 YY1 JASPAR yes 105404923 3281 70407530
chr6 105401657 105401667 SP1 JASPAR yes 105404923 3256 70407531
chr6 105401658 105401664 SP1 TRANSFAC yes 105404923 3259 70407532
chr6 105401666 105401670 YY1 TRANSFAC yes 105404923 3253 70407533
chr6 105401672 105401693 ZNF263 JASPAR yes 105404923 3230 70407534
chr6 105401675 105401696 ZNF263 JASPAR yes 105404923 3227 70407535
chr6 105401699 105401713 TLX1 JASPAR yes 105404923 3210 70407536
chr6 105401716 105401722 SP1 TRANSFAC yes 105404923 3201 70407537
chr6 105401716 105401726 SP1 JASPAR yes 105404923 3197 70407538
chr6 105401746 105401755 SOX9 JASPAR yes 105404923 3168 70407539
chr6 105401761 105401764 MYB TRANSFAC yes 105404923 3159 70407540
chr6 105402484 105402692 NR2F2 UCSC Txn Factor no Conserved 105404923 2231 108541081
chr6 105402560 105402563 MYB TRANSFAC yes 105404923 2360 70407541
chr6 105402560 105402574 NR2F1 JASPAR yes 105404923 2349 70407542
chr6 105402560 105402574 RXRB JASPAR yes 105404923 2349 70407543
chr6 105402560 105402574 RXRG JASPAR yes 105404923 2349 70407544
chr6 105402560 105402575 NR2C2 JASPAR yes 105404923 2348 70407545
chr6 105402567 105402579 PKNOX1 JASPAR yes 105404923 2344 70407546
chr6 105402567 105402579 PKNOX2 JASPAR yes 105404923 2344 70407547
chr6 105402567 105402579 TGIF1 JASPAR yes 105404923 2344 70407548
chr6 105402617 105402632 NFYB JASPAR yes 105404923 2291 70407549
chr6 105402624 105402628 H1TF2 TRANSFAC yes 105404923 2295 70407550
chr6 105402624 105402628 NFE TRANSFAC yes 105404923 2295 70407551
chr6 105402624 105402628 SRF TRANSFAC yes 105404923 2295 70407552
chr6 105403517 105403523 ZNF354C JASPAR yes 105404923 1400 70407553
chr6 105403536 105403546 SP1 JASPAR yes 105404923 1377 70407554
chr6 105403538 105403544 MAZ TRANSFAC yes 105404923 1379 70407555
chr6 105403539 105403549 MZF1 JASPAR yes 105404923 1374 70407556
chr6 105403558 105403563 SP1 TRANSFAC yes 105404923 1360 70407557
chr6 105403559 105403569 ZNF740 JASPAR yes 105404923 1354 70407558
chr6 105403559 105403579 PPARG JASPAR yes 105404923 1344 70407559
chr6 105403561 105403571 SP1 JASPAR yes 105404923 1352 70407560
chr6 105403563 105403569 MAZ TRANSFAC yes 105404923 1354 70407561
chr6 105403568 105403572 ESR1 TRANSFAC yes 105404923 1351 70407562
chr6 105403582 105403588 SOX10 JASPAR yes 105404923 1335 70407563
chr6 105403589 105403600 FLI1 JASPAR yes 105404923 1323 70407564
chr6 105403590 105403595 ETS2 TRANSFAC yes 105404923 1328 70407565
chr6 105403590 105403598 FEV JASPAR yes 105404923 1325 70407566
chr6 105403591 105403598 SPI1 JASPAR yes 105404923 1325 70407567
chr6 105403599 105403604 GATA1 TRANSFAC yes 105404923 1319 70407568
chr6 105403639 105403653 GLIS3 JASPAR yes 105404923 1270 70407569
chr6 105403643 105403653 ZNF740 JASPAR yes 105404923 1270 70407570
chr6 105403645 105403655 SP1 JASPAR yes 105404923 1268 70407571
chr6 105403646 105403656 SP1 JASPAR yes 105404923 1267 70407572
chr6 105403647 105403657 SP1 JASPAR yes 105404923 1266 70407573
chr6 105403649 105403654 SP1 TRANSFAC yes 105404923 1269 70407574
chr6 105403674 105403678 YY1 TRANSFAC yes 105404923 1245 70407575
chr6 105403682 105403697 MEF2C JASPAR yes 105404923 1226 70407576
chr6 105403683 105403698 MEF2A JASPAR yes 105404923 1225 70407577
chr6 105403684 105403696 MEF2A JASPAR yes 105404923 1227 70407578
chr6 105403685 105403695 MEF2A JASPAR yes 105404923 1228 70407579
chr6 105403698 105403702 YY1 TRANSFAC yes 105404923 1221 70407580
chr6 105403705 105403709 YY1 TRANSFAC yes 105404923 1214 70407581
chr6 105403708 105403719 STAT1 JASPAR yes 105404923 1204 70407582
chr6 105403712 105403717 ETS2 TRANSFAC yes 105404923 1206 70407583
chr6 105403712 105403720 FEV JASPAR yes 105404923 1203 70407584
chr6 105403731 105403746 HNF1A JASPAR yes 105404923 1177 70407585
chr6 105403732 105403745 HNF1B JASPAR yes 105404923 1178 70407586
chr6 105403739 105403743 TEAD2 TRANSFAC yes 105404923 1180 70407587
chr6 105403744 105403748 YY1 TRANSFAC yes 105404923 1175 70407588
chr6 105403763 105403772 THAP1 JASPAR yes 105404923 1151 70407589
chr6 105403766 105403770 LFA1 TRANSFAC yes 105404923 1153 70407590
chr6 105403794 105403804 CUX1 JASPAR yes 105404923 1119 70407591
chr6 105403806 105403818 GRHL1 JASPAR yes 105404923 1105 70407592
chr6 105403807 105403817 TFCP2 JASPAR yes 105404923 1106 70407593
chr6 105403836 105403840 YY1 TRANSFAC yes 105404923 1083 70407594
chr6 105403851 105403855 ESR1 TRANSFAC yes 105404923 1068 70407595
chr6 105403854 105403859 MYC TRANSFAC yes 105404923 1064 70407596
chr6 105403855 105403876 ZNF263 JASPAR yes 105404923 1047 70407597
chr6 105403859 105403867 EHF JASPAR yes 105404923 1056 70407598
chr6 105403885 105403896 DMRT3 JASPAR yes 105404923 1027 70407599
chr6 105403887 105403901 IRF7 JASPAR yes 105404923 1022 70407600
chr6 105403887 105403902 IRF9 JASPAR yes 105404923 1021 70407601
chr6 105403892 105403896 YY1 TRANSFAC yes 105404923 1027 70407602
SNPs associated with LIN28B[ENSG00000187772.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of LIN28B[ENSG00000187772.6]
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Genomic Location chr6:105404923-105531207[+]
TSS 105404923
Gene Name LIN28B
Ensembl ID ENSG00000187772.6
ENTREZID 389421
Uniprot
A0A1B0GVD3
Q6ZN17
Protein Name
LIN28B protein
Protein lin-28 homolog B
Expression levels of LIN28B[ENSG00000187772.6]
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