| Chrom. | Start | End | Enhancer ID | TSS of gene | Distance between enhancer and TSS | Tissues that enhancer appears | More |
|---|---|---|---|---|---|---|---|
| chr12 | 51885274 | 51885441 | vista13410 | 51984050 | 98609 |
|
|
| chr12 | 51914525 | 51920655 | enh51210 | 51984050 | 63395 |
|
|
| chr12 | 51920665 | 51930335 | enh14720 | 51984050 | 53715 |
|
|
| chr12 | 51940163 | 51944339 | enh43737 | 51984050 | 39711 |
|
|
| chr12 | 51986166 | 51986575 | vista13411 | 51984050 | 2116 |
|
|
| chr12 | 52012405 | 52018595 | enh29573 | 51984050 | 28355 |
|
|
| chr12 | 52022899 | 52032661 | enh29574 | 51984050 | 38849 |
|
|
| chr12 | 52058654 | 52062804 | enh68139 | 51984050 | 74604 |
|
|
| chr12 | 52066965 | 52074176 | enh47580 | 51984050 | 82915 |
|
|
| chr12 | 52074805 | 52079815 | enh75038 | 51984050 | 90755 |
|
| Chrom. | Start | End | TF name | Source | Predicted site? | Tissue | TSS of gene | Distance between TFBS and gene | id | More |
|---|---|---|---|---|---|---|---|---|---|---|
| chr12 | 51985752 | 51986272 | ZNF143 | ENCODE Uniform TFBS | no | Embryonic Stem Cell Line (H1-hESC) | 51984050 | 1702 | 108031902 | |
| chr12 | 51985932 | 51986222 | ZNF143 | ENCODE Uniform TFBS | no | Embryonic Stem Cell Line (H1-hESC) | 51984050 | 1882 | 108031903 | |
| chr12 | 51986113 | 51986423 | TAF1 | ENCODE Uniform TFBS | no | Brain (SK-N-SH) | 51984050 | 2063 | 108031904 | |
| chr12 | 51986167 | 51986403 | TAF1 | ENCODE Uniform TFBS | no | Brain (SK-N-SH) | 51984050 | 2117 | 108031905 | |
| chr12 | 51986168 | 51986180 | YY1 | JASPAR | yes | 51984050 | 2118 | 82403761 | ||
| chr12 | 51986173 | 51986177 | YY1 | TRANSFAC | yes | 51984050 | 2123 | 82403762 | ||
| chr12 | 51986195 | 51986451 | TAF1 | ENCODE Uniform TFBS | no | Brain (SK-N-SH) | 51984050 | 2145 | 108031906 | |
| chr12 | 51986209 | 51986219 | TEAD1 | JASPAR | yes | 51984050 | 2159 | 82403763 | ||
| chr12 | 51986209 | 51986219 | TEAD4 | JASPAR | yes | 51984050 | 2159 | 82403764 | ||
| chr12 | 51986210 | 51986218 | TEAD3 | JASPAR | yes | 51984050 | 2160 | 82403765 | ||
| chr12 | 51986225 | 51986243 | RARA | JASPAR | yes | 51984050 | 2175 | 82403766 | ||
| chr12 | 51986229 | 51986243 | PLAG1 | JASPAR | yes | 51984050 | 2179 | 82403767 | ||
| chr12 | 51986229 | 51986250 | ZNF263 | JASPAR | yes | 51984050 | 2179 | 82403768 | ||
| chr12 | 51986240 | 51986253 | ELF1 | JASPAR | yes | 51984050 | 2190 | 82403769 | ||
| chr12 | 51986252 | 51986268 | SOX4 | JASPAR | yes | 51984050 | 2202 | 82403770 | ||
| chr12 | 51986283 | 51986287 | YY1 | TRANSFAC | yes | 51984050 | 2233 | 82403771 | ||
| chr12 | 51986294 | 51986304 | RELA | JASPAR | yes | 51984050 | 2244 | 82403772 | ||
| chr12 | 51986294 | 51986304 | REL | JASPAR | yes | 51984050 | 2244 | 82403773 | ||
| chr12 | 51986297 | 51986312 | HNF4G | JASPAR | yes | 51984050 | 2247 | 82403774 | ||
| chr12 | 51986320 | 51986334 | POU4F1 | JASPAR | yes | 51984050 | 2270 | 82403775 | ||
| chr12 | 51986320 | 51986336 | POU4F2 | JASPAR | yes | 51984050 | 2270 | 82403776 | ||
| chr12 | 51986320 | 51986336 | POU4F3 | JASPAR | yes | 51984050 | 2270 | 82403777 | ||
| chr12 | 51986321 | 51986337 | POU4F3 | JASPAR | yes | 51984050 | 2271 | 82403778 | ||
| chr12 | 51986323 | 51986337 | POU4F1 | JASPAR | yes | 51984050 | 2273 | 82403779 | ||
| chr12 | 51986345 | 51986357 | E2F8 | JASPAR | yes | 51984050 | 2295 | 82403780 | ||
| chr12 | 51986346 | 51986356 | ZNF740 | JASPAR | yes | 51984050 | 2296 | 82403781 | ||
| chr12 | 51986348 | 51986358 | SP1 | JASPAR | yes | 51984050 | 2298 | 82403782 | ||
| chr12 | 51986349 | 51986359 | SP1 | JASPAR | yes | 51984050 | 2299 | 82403783 | ||
| chr12 | 51986351 | 51986357 | MAZ | TRANSFAC | yes | 51984050 | 2301 | 82403784 | ||
| chr12 | 51986363 | 51986377 | NR2F1 | JASPAR | yes | 51984050 | 2313 | 82403785 | ||
| chr12 | 51986388 | 51986400 | INSM1 | JASPAR | yes | 51984050 | 2338 | 82403786 | ||
| chr12 | 51986393 | 51986403 | SP1 | JASPAR | yes | 51984050 | 2343 | 82403787 | ||
| chr12 | 51986393 | 51986414 | ZNF263 | JASPAR | yes | 51984050 | 2343 | 82403788 | ||
| chr12 | 51986395 | 51986401 | MAZ | TRANSFAC | yes | 51984050 | 2345 | 82403789 | ||
| chr12 | 51986395 | 51986406 | E2F6 | JASPAR | yes | 51984050 | 2345 | 82403790 | ||
| chr12 | 51986401 | 51986416 | HNF1A | JASPAR | yes | 51984050 | 2351 | 82403791 | ||
| chr12 | 51986402 | 51986415 | HNF1B | JASPAR | yes | 51984050 | 2352 | 82403792 | ||
| chr12 | 51986405 | 51986415 | EMX1 | JASPAR | yes | 51984050 | 2355 | 82403793 | ||
| chr12 | 51986405 | 51986415 | EMX2 | JASPAR | yes | 51984050 | 2355 | 82403794 | ||
| chr12 | 51986405 | 51986415 | ESX1 | JASPAR | yes | 51984050 | 2355 | 82403795 | ||
| chr12 | 51986405 | 51986415 | EVX1 | JASPAR | yes | 51984050 | 2355 | 82403796 | ||
| chr12 | 51986405 | 51986415 | EVX2 | JASPAR | yes | 51984050 | 2355 | 82403797 | ||
| chr12 | 51986405 | 51986415 | GBX2 | JASPAR | yes | 51984050 | 2355 | 82403798 | ||
| chr12 | 51986405 | 51986415 | HESX1 | JASPAR | yes | 51984050 | 2355 | 82403799 | ||
| chr12 | 51986405 | 51986415 | HOXA2 | JASPAR | yes | 51984050 | 2355 | 82403800 | ||
| chr12 | 51986405 | 51986415 | HOXB2 | JASPAR | yes | 51984050 | 2355 | 82403801 | ||
| chr12 | 51986405 | 51986415 | HOXB3 | JASPAR | yes | 51984050 | 2355 | 82403802 | ||
| chr12 | 51986405 | 51986415 | LHX2 | JASPAR | yes | 51984050 | 2355 | 82403803 | ||
| chr12 | 51986405 | 51986415 | LHX6 | JASPAR | yes | 51984050 | 2355 | 82403804 | ||
| chr12 | 51986405 | 51986415 | MEOX1 | JASPAR | yes | 51984050 | 2355 | 82403805 | ||
| chr12 | 51986405 | 51986415 | MEOX2 | JASPAR | yes | 51984050 | 2355 | 82403806 | ||
| chr12 | 51986405 | 51986415 | POU6F1 | JASPAR | yes | 51984050 | 2355 | 82403807 | ||
| chr12 | 51986405 | 51986415 | RAX | JASPAR | yes | 51984050 | 2355 | 82403808 | ||
| chr12 | 51986406 | 51986414 | LBX1 | JASPAR | yes | 51984050 | 2356 | 82403809 | ||
| chr12 | 51986406 | 51986414 | PDX1 | JASPAR | yes | 51984050 | 2356 | 82403810 | ||
| chr12 | 51986406 | 51986414 | VAX1 | JASPAR | yes | 51984050 | 2356 | 82403811 | ||
| chr12 | 51986406 | 51986414 | VAX2 | JASPAR | yes | 51984050 | 2356 | 82403812 | ||
| chr12 | 51986406 | 51986414 | VSX1 | JASPAR | yes | 51984050 | 2356 | 82403813 | ||
| chr12 | 51986406 | 51986414 | VSX2 | JASPAR | yes | 51984050 | 2356 | 82403814 | ||
| chr12 | 51986406 | 51986416 | POU6F2 | JASPAR | yes | 51984050 | 2356 | 82403815 | ||
| chr12 | 51986406 | 51986420 | POU1F1 | JASPAR | yes | 51984050 | 2356 | 82403816 | ||
| chr12 | 51986407 | 51986419 | POU3F2 | JASPAR | yes | 51984050 | 2357 | 82403817 | ||
| chr12 | 51986407 | 51986420 | POU3F3 | JASPAR | yes | 51984050 | 2357 | 82403818 | ||
| chr12 | 51986409 | 51986418 | POU3F4 | JASPAR | yes | 51984050 | 2359 | 82403819 | ||
| chr12 | 51986409 | 51986418 | POU5F1B | JASPAR | yes | 51984050 | 2359 | 82403820 | ||
| chr12 | 51986436 | 51986441 | ETS2 | TRANSFAC | yes | 51984050 | 2386 | 82403821 | ||
| chr12 | 51986459 | 51986468 | HIC2 | JASPAR | yes | 51984050 | 2409 | 82403822 | ||
| chr12 | 51986462 | 51986466 | LFA1 | TRANSFAC | yes | 51984050 | 2412 | 82403823 | ||
| chr12 | 51986483 | 51986497 | SPI1 | JASPAR | yes | 51984050 | 2433 | 82403824 | ||
| chr12 | 51986484 | 51986497 | ELF1 | JASPAR | yes | 51984050 | 2434 | 82403825 | ||
| chr12 | 51986484 | 51986505 | ZNF263 | JASPAR | yes | 51984050 | 2434 | 82403826 | ||
| chr12 | 51986485 | 51986497 | EHF | JASPAR | yes | 51984050 | 2435 | 82403827 | ||
| chr12 | 51986485 | 51986497 | ELF1 | JASPAR | yes | 51984050 | 2435 | 82403828 | ||
| chr12 | 51986485 | 51986497 | ELF4 | JASPAR | yes | 51984050 | 2435 | 82403829 | ||
| chr12 | 51986485 | 51986498 | ELF3 | JASPAR | yes | 51984050 | 2435 | 82403830 | ||
| chr12 | 51986486 | 51986497 | ELF5 | JASPAR | yes | 51984050 | 2436 | 82403831 | ||
| chr12 | 51986487 | 51986497 | ERF | JASPAR | yes | 51984050 | 2437 | 82403832 | ||
| chr12 | 51986487 | 51986497 | ETS1 | JASPAR | yes | 51984050 | 2437 | 82403833 | ||
| chr12 | 51986487 | 51986497 | ETV6 | JASPAR | yes | 51984050 | 2437 | 82403834 | ||
| chr12 | 51986487 | 51986497 | GABPA | JASPAR | yes | 51984050 | 2437 | 82403835 | ||
| chr12 | 51986487 | 51986498 | ELK4 | JASPAR | yes | 51984050 | 2437 | 82403836 | ||
| chr12 | 51986487 | 51986498 | FLI1 | JASPAR | yes | 51984050 | 2437 | 82403837 | ||
| chr12 | 51986488 | 51986496 | EHF | JASPAR | yes | 51984050 | 2438 | 82403838 | ||
| chr12 | 51986488 | 51986496 | FEV | JASPAR | yes | 51984050 | 2438 | 82403839 | ||
| chr12 | 51986489 | 51986496 | SPI1 | JASPAR | yes | 51984050 | 2439 | 82403840 | ||
| chr12 | 51986496 | 51986506 | SP1 | JASPAR | yes | 51984050 | 2446 | 82403841 | ||
| chr12 | 51986497 | 51986517 | RREB1 | JASPAR | yes | 51984050 | 2447 | 82403842 | ||
| chr12 | 51986499 | 51986504 | SP1 | TRANSFAC | yes | 51984050 | 2449 | 82403843 | ||
| chr12 | 51986502 | 51986516 | PLAG1 | JASPAR | yes | 51984050 | 2452 | 82403844 | ||
| chr12 | 51986503 | 51986508 | SP1 | TRANSFAC | yes | 51984050 | 2453 | 82403845 | ||
| chr12 | 51986503 | 51986517 | PLAG1 | JASPAR | yes | 51984050 | 2453 | 82403846 | ||
| chr12 | 51986508 | 51986518 | GCM2 | JASPAR | yes | 51984050 | 2458 | 82403847 | ||
| chr12 | 51986510 | 51986525 | NR2C2 | JASPAR | yes | 51984050 | 2460 | 82403848 | ||
| chr12 | 51986511 | 51986525 | PLAG1 | JASPAR | yes | 51984050 | 2461 | 82403849 | ||
| chr12 | 51986511 | 51986526 | NR2C2 | JASPAR | yes | 51984050 | 2461 | 82403850 | ||
| chr12 | 51986512 | 51986526 | RXRB | JASPAR | yes | 51984050 | 2462 | 82403851 | ||
| chr12 | 51986517 | 51986532 | PRDM1 | JASPAR | yes | 51984050 | 2467 | 82403852 | ||
| chr12 | 51986532 | 51986542 | HOXD11 | JASPAR | yes | 51984050 | 2482 | 82403853 | ||
| chr12 | 51986532 | 51986542 | HOXD13 | JASPAR | yes | 51984050 | 2482 | 82403854 | ||
| chr12 | 51986532 | 51986543 | HOXA10 | JASPAR | yes | 51984050 | 2482 | 82403855 | ||
| chr12 | 51986533 | 51986544 | CDX2 | JASPAR | yes | 51984050 | 2483 | 82403856 | ||
| chr12 | 51986536 | 51986540 | TEAD2 | TRANSFAC | yes | 51984050 | 2486 | 82403857 | ||
| chr12 | 51986538 | 51986541 | MYB | TRANSFAC | yes | 51984050 | 2488 | 82403858 | ||
| chr12 | 51986542 | 51986550 | FOXO3 | JASPAR | yes | 51984050 | 2492 | 82403859 |
| Chrom. | Position | dbSNP ID | Reference Allele | Alternative Allele | Distance between TSS and SNP | Tissue | q Value | id | More |
|---|---|---|---|---|---|---|---|---|---|
| chr12 | 51987478 | rs1948432 | C | T | 0 | Esophagus | 0.0084193 | 2631704 | |
| chr12 | 51987478 | rs1948432 | C | T | 0 | Esophagus | 5.69046e-06 | 2631704 | |
| chr12 | 51987478 | rs1948432 | C | T | 0 | Heart | 8.79372e-05 | 2631704 | |
| chr12 | 52182452 | rs9943714 | C | T | 0 | Heart | 0.127298 | 2632422 | |
| chr12 | 52952446 | rs7970033 | A | G | 745798 | Breast | 0.104371 | 2640045 | |
| chr12 | 52612034 | rs142451476 | C | T | 405386 | Spleen | 0.197824 | 2636995 | |
| chr12 | 51926164 | rs11169870 | G | A | 57886 | Ovary | 0.149597 | 2631555 | |
| chr12 | 51728464 | rs17860337 | T | C | 255586 | Uterus | 0.374369 | 2630781 | |
| chr12 | 51987478 | rs1948432 | C | T | 0 | Thyroid | 0.0740899 | 2631704 | |
| chr12 | 52541863 | rs35162753 | C | T | 335215 | Stomach | 0.295935 | 2635987 | |
| chr12 | 52919117 | rs74093486 | C | G,T | 712469 | Adrenal | 0.0245029 | 2639637 |
| Genomic Location | chr12:51984050-52206648[+] |
| TSS | 51984050 |
| Gene Name | SCN8A |
| Ensembl ID | ENSG00000196876.9 |
| ENTREZID | 6334 |
| Uniprot | |
| Q6B4S4 | |
| Q9UQD0 | |
| Protein Name | |
| HNa6/Scn8a voltage-gated sodium channel | |
| Nav1.6 | |
| Sodium channel protein | |
| Sodium channel protein type 8 subunit alpha | |
| Voltage-gated sodium channel Nav1.6 |