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Enhancers that regulate SERTAD1[ENSG00000197019.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 40833765 40837915 enh18071 40931932 94017
Placenta
chr19 40849279 40849406 vista29386 40931932 82526
VISTA
chr19 40860893 40871295 enh18072 40931932 60637
Astrocyte Placenta Muscle (A673) Blood (OCI-LY7)
chr19 40921045 40925195 enh99571 40931932 6737
Uterus
chr19 40923099 40923282 vista29387 40931932 8650
VISTA
chr19 40930264 40930817 vista29388 40931932 1115
VISTA
chr19 40937323 40944675 enh5138 40931932 5391
Bone Marrow (K562) Brain (SK-N-SH) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Blood (T-cell)
chr19 40939716 40940068 vista29389 40931932 7784
VISTA
chr19 40942693 40943017 vista29390 40931932 10761
VISTA
chr19 40951707 40952008 vista29391 40931932 19775
VISTA
chr19 40957289 40962099 enh62729 40931932 25357
Esophagus
chr19 40965107 40970093 enh60764 40931932 33175
Blood (OCI-LY7) Stomach
chr19 40969437 40969789 vista29392 40931932 37505
VISTA
chr19 41010283 41010686 vista29393 40931932 78351
VISTA
chr19 41014841 41015014 vista29394 40931932 82909
VISTA
Transcript facotrs that regulate SERTAD1[ENSG00000197019.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 40929838 40930359 ZNF143 GTRD no Epithelial (MCF-7) 40931932 1573 108409448
chr19 40929845 40930522 ZNF143 GTRD no Epithelial (MCF-7) 40931932 1410 108409449
chr19 40930271 40930282 FOXH1 JASPAR yes 40931932 1650 70846571
chr19 40930281 40930285 H1TF2 TRANSFAC yes 40931932 1647 70846572
chr19 40930281 40930285 NFE TRANSFAC yes 40931932 1647 70846573
chr19 40930281 40930285 SRF TRANSFAC yes 40931932 1647 70846574
chr19 40930281 40930293 HNF1B JASPAR yes 40931932 1639 70846575
chr19 40930295 40930305 MZF1 JASPAR yes 40931932 1627 70846576
chr19 40930305 40930835 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 40931932 1097 108409450
chr19 40930306 40930319 ZBTB18 JASPAR yes 40931932 1613 70846577
chr19 40930307 40930319 NHLH1 JASPAR yes 40931932 1613 70846578
chr19 40930308 40930318 MSC JASPAR yes 40931932 1614 70846579
chr19 40930308 40930318 MYF6 JASPAR yes 40931932 1614 70846580
chr19 40930308 40930318 NHLH1 JASPAR yes 40931932 1614 70846581
chr19 40930308 40930318 TFAP4 JASPAR yes 40931932 1614 70846582
chr19 40930308 40930320 TAL1 JASPAR yes 40931932 1612 70846583
chr19 40930317 40930633 ZNF143 GTRD no Epithelial (MCF-7) 40931932 1299 108409451
chr19 40930318 40930334 POU4F2 JASPAR yes 40931932 1598 70846584
chr19 40930323 40930327 YY1 TRANSFAC yes 40931932 1605 70846585
chr19 40930324 40930334 HOXA13 JASPAR yes 40931932 1598 70846586
chr19 40930324 40930334 HOXD13 JASPAR yes 40931932 1598 70846587
chr19 40930324 40930335 HOXA10 JASPAR yes 40931932 1597 70846588
chr19 40930325 40930334 CDX1 JASPAR yes 40931932 1598 70846589
chr19 40930325 40930336 CDX2 JASPAR yes 40931932 1596 70846590
chr19 40930331 40930335 TEAD2 TRANSFAC yes 40931932 1597 70846591
chr19 40930336 40930339 MYB TRANSFAC yes 40931932 1593 70846592
chr19 40930336 40930347 PHOX2A JASPAR yes 40931932 1585 70846593
chr19 40930336 40930347 PROP1 JASPAR yes 40931932 1585 70846594
chr19 40930348 40930360 FOXI1 JASPAR yes 40931932 1572 70846595
chr19 40930350 40930364 POU4F1 JASPAR yes 40931932 1568 70846596
chr19 40930351 40930362 PROP1 JASPAR yes 40931932 1570 70846597
chr19 40930354 40930870 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 40931932 1062 108409452
chr19 40930360 40930364 TEAD2 TRANSFAC yes 40931932 1568 70846598
chr19 40930368 40930372 TEAD2 TRANSFAC yes 40931932 1560 70846599
chr19 40930368 40930373 TBP TRANSFAC yes 40931932 1559 70846600
chr19 40930368 40930374 TMF TRANSFAC yes 40931932 1558 70846601
chr19 40930369 40930385 POU4F2 JASPAR yes 40931932 1547 70846602
chr19 40930377 40930389 GRHL1 JASPAR yes 40931932 1543 70846603
chr19 40930378 40930388 TFCP2 JASPAR yes 40931932 1544 70846604
chr19 40930390 40932543 POLR2A UCSC Txn Factor no Conserved 40931932 611 108409453
chr19 40930391 40930407 POU4F2 JASPAR yes 40931932 1525 70846605
chr19 40930396 40930408 HNF1B JASPAR yes 40931932 1524 70846606
chr19 40930397 40930409 FOXI1 JASPAR yes 40931932 1523 70846607
chr19 40930400 40930404 YY1 TRANSFAC yes 40931932 1528 70846608
chr19 40930400 40930410 HOXA13 JASPAR yes 40931932 1522 70846609
chr19 40930400 40930411 HOXA10 JASPAR yes 40931932 1521 70846610
chr19 40930401 40930412 CDX2 JASPAR yes 40931932 1520 70846611
chr19 40930428 40930443 FOXP1 JASPAR yes 40931932 1489 70846612
chr19 40930429 40930444 FOXA1 JASPAR yes 40931932 1488 70846613
chr19 40930430 40930442 FOXC2 JASPAR yes 40931932 1490 70846614
chr19 40930432 40930446 ONECUT3 JASPAR yes 40931932 1486 70846615
chr19 40930432 40930447 HNF1A JASPAR yes 40931932 1485 70846616
chr19 40930432 40930450 SRF JASPAR yes 40931932 1482 70846617
chr19 40930433 40930446 HNF1B JASPAR yes 40931932 1486 70846618
chr19 40930433 40930447 POU4F1 JASPAR yes 40931932 1485 70846619
chr19 40930433 40930448 FOXA1 JASPAR yes 40931932 1484 70846620
chr19 40930433 40930449 POU4F2 JASPAR yes 40931932 1483 70846621
chr19 40930433 40930449 POU4F3 JASPAR yes 40931932 1483 70846622
chr19 40930434 40930445 FOXB1 JASPAR yes 40931932 1487 70846623
chr19 40930434 40930445 FOXC1 JASPAR yes 40931932 1487 70846624
chr19 40930434 40930445 PROP1 JASPAR yes 40931932 1487 70846625
chr19 40930434 40930446 FOXC2 JASPAR yes 40931932 1486 70846626
chr19 40930435 40930447 FOXI1 JASPAR yes 40931932 1485 70846627
chr19 40930439 40931015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 40931932 917 108409454
chr19 40930443 40930448 ETS2 TRANSFAC yes 40931932 1484 70846628
chr19 40930447 40930453 HiNF-A TRANSFAC yes 40931932 1479 70846629
chr19 40930448 40930461 ELF1 JASPAR yes 40931932 1471 70846630
chr19 40930448 40930464 SOX4 JASPAR yes 40931932 1468 70846631
chr19 40930450 40930461 ETV2 JASPAR yes 40931932 1471 70846632
chr19 40930451 40930461 ERF JASPAR yes 40931932 1471 70846633
chr19 40930451 40930461 ERG JASPAR yes 40931932 1471 70846634
chr19 40930451 40930461 ETS1 JASPAR yes 40931932 1471 70846635
chr19 40930451 40930461 FEV JASPAR yes 40931932 1471 70846636
chr19 40930451 40930461 FLI1 JASPAR yes 40931932 1471 70846637
chr19 40930451 40930462 FLI1 JASPAR yes 40931932 1470 70846638
chr19 40930452 40930460 FEV JASPAR yes 40931932 1472 70846639
chr19 40930467 40930482 STAT1 JASPAR yes 40931932 1450 70846640
chr19 40930469 40930480 STAT1 JASPAR yes 40931932 1452 70846641
chr19 40930472 40930482 GABPA JASPAR yes 40931932 1450 70846642
chr19 40930539 40930543 YY1 TRANSFAC yes 40931932 1389 70846643
chr19 40930543 40931047 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 40931932 885 108409455
chr19 40930548 40930563 TFAP2A JASPAR yes 40931932 1369 70846644
chr19 40930548 40930563 TFAP2C JASPAR yes 40931932 1369 70846645
chr19 40930548 40930567 REST JASPAR yes 40931932 1365 70846646
chr19 40930550 40930562 TFAP2A JASPAR yes 40931932 1370 70846647
chr19 40930550 40930562 TFAP2B JASPAR yes 40931932 1370 70846648
chr19 40930550 40930562 TFAP2C JASPAR yes 40931932 1370 70846649
chr19 40930550 40930565 TFAP2A JASPAR yes 40931932 1367 70846650
chr19 40930550 40930565 TFAP2C JASPAR yes 40931932 1367 70846651
chr19 40930554 40930954 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 40931932 978 108409456
chr19 40930565 40930584 PAX5 JASPAR yes 40931932 1348 70846652
chr19 40930590 40930606 ZNF143 JASPAR yes 40931932 1326 70846653
chr19 40930594 40930602 TEAD3 JASPAR yes 40931932 1330 70846654
chr19 40930602 40930623 ZNF263 JASPAR yes 40931932 1309 70846655
chr19 40930603 40930610 CEBPA TRANSFAC yes 40931932 1322 70846656
chr19 40930604 40930615 E2F6 JASPAR yes 40931932 1317 70846657
chr19 40930634 40930649 TFAP2A JASPAR yes 40931932 1283 70846658
chr19 40930634 40930649 TFAP2C JASPAR yes 40931932 1283 70846659
chr19 40930665 40931141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 40931932 791 108409457
chr19 40930679 40931255 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 40931932 677 108409458
chr19 40930712 40930717 NFY TRANSFAC yes 40931932 1215 70846660
chr19 40930715 40930720 TFAP2A TRANSFAC yes 40931932 1212 70846661
chr19 40930715 40930721 MZF1 JASPAR yes 40931932 1211 70846662
chr19 40930735 40930739 LFA1 TRANSFAC yes 40931932 1193 70846663
chr19 40930744 40930762 ESR1 JASPAR yes 40931932 1170 70846664
chr19 40930746 40930761 ESR2 JASPAR yes 40931932 1171 70846665
chr19 40930747 40930751 ESR1 TRANSFAC yes 40931932 1181 70846666
chr19 40930762 40930776 SPI1 JASPAR yes 40931932 1156 70846667
chr19 40930776 40931186 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 40931932 746 108409459
chr19 40930779 40930791 IRF1 JASPAR yes 40931932 1141 70846668
chr19 40930786 40931466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 40931932 466 108409460
chr19 40930790 40930795 GATA2 JASPAR yes 40931932 1137 70846669
chr19 40930802 40930807 SP1 TRANSFAC yes 40931932 1125 70846670
chr19 40930805 40930809 LFA1 TRANSFAC yes 40931932 1123 70846671
chr19 40930812 40930816 YY1 TRANSFAC yes 40931932 1116 70846672
SNPs associated with SERTAD1[ENSG00000197019.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of SERTAD1[ENSG00000197019.4]
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Genomic Location chr19:40927499-40931932[-]
TSS 40931932
Gene Name SERTAD1
Ensembl ID ENSG00000197019.4
ENTREZID 29950
Uniprot
Q9UHV2
Q53GC0
Protein Name
SERTA domain containing 1 variant
SERTA domain-containing protein 1
Expression levels of SERTAD1[ENSG00000197019.4]
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