EnhancerDB
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Enhancers that regulate TWIST2[ENSG00000233608.2]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 239680965 239688295 enh6222 239756673 68378
Blood (Karpas-422)
chr2 239690905 239696134 enh88574 239756673 60539
Prostate (RWPE1) Pancreas (Panc1) Pancreas Spleen Uterus
chr2 239698225 239702375 enh19408 239756673 54298
Placenta
chr2 239708525 239712675 enh97098 239756673 43998
Epithelial (MCF-7)
chr2 239718045 239722675 enh99816 239756673 33998
Uterus
chr2 239727705 239732355 enh99817 239756673 24318
Uterus
chr2 239754500 239754642 vista35473 239756673 2031
VISTA
chr2 239755854 239755907 vista35474 239756673 766
VISTA
chr2 239758150 239758505 vista35475 239756673 1477
VISTA
chr2 239762168 239762270 vista35476 239756673 5495
VISTA
chr2 239767765 239780469 enh19409 239756673 11092
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Heart
chr2 239767893 239768141 vista35477 239756673 11220
VISTA
chr2 239772979 239773251 vista35478 239756673 16306
VISTA
chr2 239779123 239779526 vista35479 239756673 22450
VISTA
chr2 239782365 239786515 enh99818 239756673 25692
Uterus
chr2 239788485 239794681 enh99819 239756673 31812
Uterus Bone (Osteoblast) Stomach
chr2 239833079 239844710 enh34444 239756673 76406
Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (Myoblast)
chr2 239848415 239854155 enh65423 239756673 91742
Spleen Uterus Bone (Osteoblast) Heart
Transcript facotrs that regulate TWIST2[ENSG00000233608.2]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 239754506 239754510 H4TF2 TRANSFAC yes 239756673 2163 22244359
chr2 239754514 239754520 MZF1 JASPAR yes 239756673 2153 22244360
chr2 239754561 239754573 HINFP JASPAR yes 239756673 2100 22244361
chr2 239754567 239754576 TFAP2A JASPAR yes 239756673 2097 22244362
chr2 239754571 239754576 SP1 TRANSFAC yes 239756673 2097 22244363
chr2 239754571 239754586 HNF4A JASPAR yes 239756673 2087 22244364
chr2 239754572 239754587 HNF4G JASPAR yes 239756673 2086 22244365
chr2 239754600 239754609 TFAP2A JASPAR yes 239756673 2064 22244366
chr2 239755869 239755874 SP1 TRANSFAC yes 239756673 799 22244367
chr2 239755880 239755885 SP1 TRANSFAC yes 239756673 788 22244368
chr2 239755881 239755886 SP1 TRANSFAC yes 239756673 787 22244369
chr2 239758172 239758186 RXRB JASPAR yes 239756673 1499 22244370
chr2 239758172 239758186 RXRG JASPAR yes 239756673 1499 22244371
chr2 239758172 239758187 NR2C2 JASPAR yes 239756673 1499 22244372
chr2 239758175 239758188 NR2F1 JASPAR yes 239756673 1502 22244373
chr2 239758177 239758188 ESRRA JASPAR yes 239756673 1504 22244374
chr2 239758179 239758196 RARA JASPAR yes 239756673 1506 22244375
chr2 239758195 239758201 MAZ TRANSFAC yes 239756673 1522 22244376
chr2 239758199 239758204 SP1 TRANSFAC yes 239756673 1526 22244377
chr2 239758203 239758209 SP1 TRANSFAC yes 239756673 1530 22244378
chr2 239758203 239758213 SP1 JASPAR yes 239756673 1530 22244379
chr2 239758205 239758210 SP1 TRANSFAC yes 239756673 1532 22244380
chr2 239758215 239758228 TFAP2A JASPAR yes 239756673 1542 22244381
chr2 239758215 239758228 TFAP2B JASPAR yes 239756673 1542 22244382
chr2 239758215 239758228 TFAP2C JASPAR yes 239756673 1542 22244383
chr2 239758237 239758241 H4TF2 TRANSFAC yes 239756673 1564 22244384
chr2 239758261 239758271 SP1 JASPAR yes 239756673 1588 22244385
chr2 239758314 239758326 NHLH1 JASPAR yes 239756673 1641 22244386
chr2 239758314 239758326 PKNOX1 JASPAR yes 239756673 1641 22244387
chr2 239758314 239758326 PKNOX2 JASPAR yes 239756673 1641 22244388
chr2 239758314 239758327 ZBTB18 JASPAR yes 239756673 1641 22244389
chr2 239758315 239758325 NHLH1 JASPAR yes 239756673 1642 22244390
chr2 239758335 239758350 STAT2 JASPAR yes 239756673 1662 22244391
chr2 239758336 239758350 SPI1 JASPAR yes 239756673 1663 22244392
chr2 239758346 239758353 SPIB JASPAR yes 239756673 1673 22244393
chr2 239758358 239758367 VENTX JASPAR yes 239756673 1685 22244394
chr2 239758381 239758385 H4TF2 TRANSFAC yes 239756673 1708 22244395
chr2 239758466 239758487 ZNF263 JASPAR yes 239756673 1793 22244396
chr2 239758481 239758487 YY1 JASPAR yes 239756673 1808 22244397
chr2 239758500 239758504 LFA1 TRANSFAC yes 239756673 1827 22244398
SNPs associated with TWIST2[ENSG00000233608.2], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 239636103 rs386393015 C CT 120570 Esophagus 0.026044 6488745
chr2 240271685 rs55962118 A C 475792 Heart 0.228749 6494376
chr2 239962930 rs62189269 G A 167037 Breast 0.177812 6491331
chr2 239961061 rs13034197 G A 165168 Ovary 0.173806 6491284
chr2 239936773 rs60378407 G A 140880 Thyroid 0.26372 6490993
chr2 239955743 rs138167976 T A 159850 Liver 0.403485 6491184
chr2 240632655 rs12618270 G T 836762 Stomach 0.0542114 6496745
Details of TWIST2[ENSG00000233608.2]
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Genomic Location chr2:239756673-239795893[+]
TSS 239756673
Gene Name TWIST2
Ensembl ID ENSG00000233608.2
ENTREZID 117581
Uniprot
Q8WVJ9
A0A024R4D4
Protein Name
Twist homolog 2
Twist-related protein 2
Expression levels of TWIST2[ENSG00000233608.2]
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