EnhancerDB
  1. Home
  2. Gene
  3. RTL1[ENSG00000254656.1]
Enhancers that regulate RTL1[ENSG00000254656.1]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 101252425 101259535 enh15948 101351184 91649
Pancreas Bone Marrow (K562) Placenta Liver (HepG2)
chr14 101280169 101294455 enh15949 101351184 56729
Liver (HepG2) Bone (Osteoblast) Placenta Muscle (Myotube) Uterus
chr14 101283054 101283176 vista19125 101351184 68008
VISTA
chr14 101288434 101288543 vista19126 101351184 62641
VISTA
chr14 101302146 101312355 enh31161 101351184 38829
Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus
chr14 101306625 101306984 vista19127 101351184 44200
VISTA
chr14 101313825 101319769 enh75607 101351184 31415
Prostate (PC-3) Bone (Osteoblast) Muscle (A673) Breast Uterus Blood (T-cell) Stomach
chr14 101325245 101341335 enh31162 101351184 9849
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Muscle (A673) Pancreas
chr14 101360837 101373315 enh15950 101351184 9653
Liver (HepG2) Brain (SK-N-SH) Ovary Bone (Osteoblast) Muscle (A673) Placenta Adrenal Pancreas Uterus Stomach
chr14 101370822 101370975 vista19128 101351184 19638
VISTA
chr14 101375838 101383075 enh31163 101351184 24654
Astrocyte Prostate (PC-3) Bone (Osteoblast) Epithelial (MCF-7)
chr14 101413765 101417915 enh96561 101351184 62581
Epithelial (MCF-7)
chr14 101419645 101423795 enh31164 101351184 68461
Astrocyte
chr14 101436605 101441075 enh80930 101351184 85421
Prostate (PC-3)
chr14 101443405 101463335 enh58625 101351184 92221
Skin (Keratinocyte) Prostate (PC-3) Colon (HCT116)
Transcript facotrs that regulate RTL1[ENSG00000254656.1]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RTL1[ENSG00000254656.1], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr14 100412329 rs12893361 C G,T 934663 Breast 0.260458 3786189
chr14 101544539 rs61991708 A C 193355 Ovary 0.40922 3795265
chr14 101185728 rs112913996 G A,T 161264 Adrenal 0.212156 3792457
Details of RTL1[ENSG00000254656.1]
Back to top
Genomic Location chr14:101346992-101351184[-]
TSS 101351184
Gene Name RTL1
Ensembl ID ENSG00000254656.1
ENTREZID 388015
Uniprot
B9EK54
A6NKG5
Protein Name
RTL1 protein
Retrotransposon-like protein 1
Expression levels of RTL1[ENSG00000254656.1]
Back to top