EnhancerDB
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Enhancers that regulate HCAR3[ENSG00000255398.2]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 123120329 123124750 enh2662 123201439 76689
Blood (OCI-LY7) Prostate (RWPE1) Spleen Blood (Karpas-422)
chr12 123126585 123138619 enh58487 123201439 62820
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 123131126 123131793 vista15209 123201439 69646
VISTA
chr12 123134609 123134748 vista15210 123201439 66691
VISTA
chr12 123139029 123146355 enh62317 123201439 55084
Esophagus Pancreas
chr12 123151125 123156575 enh30023 123201439 44864
Astrocyte Prostate (PC-3) Bone (Osteoblast) Lung (PC-9)
chr12 123159985 123168655 enh15071 123201439 32784
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr12 123169745 123175135 enh109584 123201439 26304
Stomach
chr12 123179525 123186187 enh58488 123201439 15252
Skin (Keratinocyte) Lung (PC-9)
chr12 123190665 123197595 enh96369 123201439 3844
Lung (PC-9) Epithelial (MCF-7)
chr12 123207042 123207235 vista15211 123201439 5603
VISTA
chr12 123207180 123213095 enh2663 123201439 5741
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 123216800 123217069 vista15212 123201439 15361
VISTA
chr12 123218047 123218405 vista15213 123201439 16608
VISTA
chr12 123221225 123225375 enh80417 123201439 19786
Prostate (PC-3)
chr12 123223226 123223440 vista15214 123201439 21787
VISTA
chr12 123228705 123228954 vista15215 123201439 27266
VISTA
chr12 123233355 123233499 vista15216 123201439 31916
VISTA
chr12 123291274 123295688 enh86151 123201439 89835
Colon (HCT116) Prostate (RWPE1) Lung (PC-9)
Transcript facotrs that regulate HCAR3[ENSG00000255398.2]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 123196435 123196453 MAFF JASPAR yes 123201439 4986 124292469
chr12 123196437 123196448 NRL JASPAR yes 123201439 4991 124292470
chr12 123196437 123196452 MAFK JASPAR yes 123201439 4987 124292471
chr12 123196467 123196476 HIC2 JASPAR yes 123201439 4963 124292472
chr12 123196529 123196533 YY1 TRANSFAC yes 123201439 4906 124292473
chr12 123196545 123196550 GATA2 JASPAR yes 123201439 4889 124292474
chr12 123196558 123196566 FOXO3 JASPAR yes 123201439 4873 124292475
chr12 123196566 123196579 POU2F2 JASPAR yes 123201439 4860 124292476
chr12 123196572 123196586 POU1F1 JASPAR yes 123201439 4853 124292477
chr12 123196573 123196585 POU3F1 JASPAR yes 123201439 4854 124292478
chr12 123196573 123196585 POU3F2 JASPAR yes 123201439 4854 124292479
chr12 123196573 123196586 POU3F3 JASPAR yes 123201439 4853 124292480
chr12 123196574 123196578 YY1 TRANSFAC yes 123201439 4861 124292481
chr12 123196574 123196586 POU2F1 JASPAR yes 123201439 4853 124292482
chr12 123196574 123196589 MEF2C JASPAR yes 123201439 4850 124292483
chr12 123196575 123196584 POU5F1B JASPAR yes 123201439 4855 124292484
chr12 123196575 123196590 MEF2A JASPAR yes 123201439 4849 124292485
chr12 123196576 123196588 MEF2A JASPAR yes 123201439 4851 124292486
chr12 123196576 123196588 MEF2B JASPAR yes 123201439 4851 124292487
chr12 123196576 123196588 MEF2D JASPAR yes 123201439 4851 124292488
chr12 123196577 123196587 MEF2A JASPAR yes 123201439 4852 124292489
chr12 123196610 123196614 YY1 TRANSFAC yes 123201439 4825 124292490
chr12 123196635 123196647 GLI2 JASPAR yes 123201439 4792 124292491
chr12 123196674 123196689 AR JASPAR yes 123201439 4750 124292492
chr12 123196702 123196717 STAT2 JASPAR yes 123201439 4722 124292493
chr12 123196746 123196764 SRF JASPAR yes 123201439 4675 124292494
chr12 123196748 123196764 SRF JASPAR yes 123201439 4675 124292495
chr12 123196748 123196766 SRF JASPAR yes 123201439 4673 124292496
chr12 123196749 123196761 SRF JASPAR yes 123201439 4678 124292497
chr12 123196751 123196763 SRF JASPAR yes 123201439 4676 124292498
chr12 123196754 123196758 YY1 TRANSFAC yes 123201439 4681 124292499
chr12 123196770 123196776 LEF1 TRANSFAC yes 123201439 4663 124292500
chr12 123196770 123196776 SOX10 JASPAR yes 123201439 4663 124292501
chr12 123196779 123196783 TEAD2 TRANSFAC yes 123201439 4656 124292502
chr12 123196781 123196784 MYB TRANSFAC yes 123201439 4655 124292503
chr12 123196815 123196824 PITX3 JASPAR yes 123201439 4615 124292504
chr12 123196823 123196828 SP1 TRANSFAC yes 123201439 4611 124292505
chr12 123196830 123196834 TEAD2 TRANSFAC yes 123201439 4605 124292506
chr12 123196830 123196835 TBP TRANSFAC yes 123201439 4604 124292507
chr12 123196840 123196855 MEF2A JASPAR yes 123201439 4584 124292508
chr12 123196841 123196853 FOXI1 JASPAR yes 123201439 4586 124292509
chr12 123196844 123196848 YY1 TRANSFAC yes 123201439 4591 124292510
chr12 123196844 123196855 HOXA10 JASPAR yes 123201439 4584 124292511
chr12 123196845 123196854 CDX1 JASPAR yes 123201439 4585 124292512
chr12 123196845 123196856 CDX2 JASPAR yes 123201439 4583 124292513
chr12 123196860 123196871 NFE2L2 JASPAR yes 123201439 4568 124292514
chr12 123196863 123196876 EOMES JASPAR yes 123201439 4563 124292515
chr12 123196865 123196875 TBR1 JASPAR yes 123201439 4564 124292516
chr12 123196865 123196876 TBX2 JASPAR yes 123201439 4563 124292517
chr12 123196866 123196876 TBX21 JASPAR yes 123201439 4563 124292518
chr12 123196867 123196875 MGA JASPAR yes 123201439 4564 124292519
chr12 123196867 123196875 TBX15 JASPAR yes 123201439 4564 124292520
chr12 123196867 123196875 TBX1 JASPAR yes 123201439 4564 124292521
chr12 123196867 123196875 TBX4 JASPAR yes 123201439 4564 124292522
chr12 123196867 123196875 TBX5 JASPAR yes 123201439 4564 124292523
chr12 123196867 123196876 ZEB1 JASPAR yes 123201439 4563 124292524
chr12 123196867 123196879 PKNOX1 JASPAR yes 123201439 4560 124292525
chr12 123196867 123196879 TGIF1 JASPAR yes 123201439 4560 124292526
chr12 123196867 123196880 ZBTB18 JASPAR yes 123201439 4559 124292527
chr12 123196868 123196878 FIGLA JASPAR yes 123201439 4561 124292528
chr12 123196868 123196878 ID4 JASPAR yes 123201439 4561 124292529
chr12 123196868 123196878 TCF3 JASPAR yes 123201439 4561 124292530
chr12 123196868 123196878 TCF4 JASPAR yes 123201439 4561 124292531
chr12 123196869 123196878 SNAI2 JASPAR yes 123201439 4561 124292532
chr12 123196870 123196875 USF2 TRANSFAC yes 123201439 4564 124292533
chr12 123196901 123196910 SNAI2 JASPAR yes 123201439 4529 124292534
chr12 123196901 123196911 ID4 JASPAR yes 123201439 4528 124292535
chr12 123196904 123196917 NFKB1 JASPAR yes 123201439 4522 124292536
chr12 123196906 123196912 ZNF354C JASPAR yes 123201439 4527 124292537
chr12 123196909 123196920 USF1 JASPAR yes 123201439 4519 124292538
chr12 123196909 123196920 USF2 JASPAR yes 123201439 4519 124292539
chr12 123196910 123196920 SREBF2 JASPAR yes 123201439 4519 124292540
chr12 123196912 123196917 USF2 TRANSFAC yes 123201439 4522 124292541
chr12 123196915 123196928 NR2F1 JASPAR yes 123201439 4511 124292542
chr12 123196916 123196924 CREB1 JASPAR yes 123201439 4515 124292543
chr12 123196917 123196935 RARA JASPAR yes 123201439 4504 124292544
chr12 123196919 123196923 ESR1 TRANSFAC yes 123201439 4516 124292545
chr12 123196945 123196957 YY1 JASPAR yes 123201439 4482 124292546
chr12 123196960 123196964 NFE TRANSFAC yes 123201439 4475 124292547
chr12 123196966 123196981 MEF2C JASPAR yes 123201439 4458 124292548
chr12 123196967 123196982 MEF2A JASPAR yes 123201439 4457 124292549
chr12 123196968 123196980 MEF2A JASPAR yes 123201439 4459 124292550
chr12 123196968 123196980 MEF2B JASPAR yes 123201439 4459 124292551
chr12 123196968 123196980 MEF2D JASPAR yes 123201439 4459 124292552
chr12 123196969 123196979 MEF2A JASPAR yes 123201439 4460 124292553
chr12 123196985 123196998 ZBTB18 JASPAR yes 123201439 4441 124292554
chr12 123196986 123196998 PKNOX2 JASPAR yes 123201439 4441 124292555
chr12 123196987 123196996 SNAI2 JASPAR yes 123201439 4443 124292556
chr12 123196987 123196997 FIGLA JASPAR yes 123201439 4442 124292557
chr12 123196987 123196997 ID4 JASPAR yes 123201439 4442 124292558
chr12 123196987 123196997 TCF3 JASPAR yes 123201439 4442 124292559
chr12 123196987 123196997 TCF4 JASPAR yes 123201439 4442 124292560
chr12 123196989 123196998 ZEB1 JASPAR yes 123201439 4441 124292561
chr12 123196990 123196998 TBX5 JASPAR yes 123201439 4441 124292562
chr12 123196992 123197002 ZNF740 JASPAR yes 123201439 4437 124292563
chr12 123196994 123197004 ZNF740 JASPAR yes 123201439 4435 124292564
chr12 123197009 123197013 TEAD2 TRANSFAC yes 123201439 4426 124292565
chr12 123197010 123197018 RHOXF1 JASPAR yes 123201439 4421 124292566
chr12 123197014 123197030 T JASPAR yes 123201439 4409 124292567
chr12 123197053 123197066 TFAP2A JASPAR yes 123201439 4373 124292568
chr12 123197053 123197066 TFAP2B JASPAR yes 123201439 4373 124292569
chr12 123197053 123197066 TFAP2C JASPAR yes 123201439 4373 124292570
chr12 123197054 123197065 EBF1 JASPAR yes 123201439 4374 124292571
chr12 123197094 123197104 TEAD1 JASPAR yes 123201439 4335 124292572
chr12 123197094 123197104 TEAD4 JASPAR yes 123201439 4335 124292573
chr12 123197094 123197106 TEAD1 JASPAR yes 123201439 4333 124292574
chr12 123197095 123197103 TEAD3 JASPAR yes 123201439 4336 124292575
chr12 123197105 123197124 PAX5 JASPAR yes 123201439 4315 124292576
chr12 123197109 123197120 NFE2L2 JASPAR yes 123201439 4319 124292577
chr12 123197125 123197129 NFE TRANSFAC yes 123201439 4310 124292578
chr12 123197137 123197152 RUNX2 JASPAR yes 123201439 4287 124292579
chr12 123197138 123197153 MEF2C JASPAR yes 123201439 4286 124292580
chr12 123197141 123197156 FOXP1 JASPAR yes 123201439 4283 124292581
chr12 123197141 123197162 IRF1 JASPAR yes 123201439 4277 124292582
chr12 123197142 123197157 FOXP1 JASPAR yes 123201439 4282 124292583
chr12 123197144 123197159 FOXP1 JASPAR yes 123201439 4280 124292584
chr12 123197145 123197166 IRF1 JASPAR yes 123201439 4273 124292585
chr12 123197146 123197161 FOXP1 JASPAR yes 123201439 4278 124292586
chr12 123197146 123197167 IRF1 JASPAR yes 123201439 4272 124292587
chr12 123197150 123197171 IRF1 JASPAR yes 123201439 4268 124292588
chr12 123197151 123197166 FOXP1 JASPAR yes 123201439 4273 124292589
chr12 123197151 123197172 IRF1 JASPAR yes 123201439 4267 124292590
chr12 123197155 123197170 STAT2 JASPAR yes 123201439 4269 124292591
chr12 123197156 123197171 FOXP1 JASPAR yes 123201439 4268 124292592
chr12 123197156 123197177 IRF1 JASPAR yes 123201439 4262 124292593
chr12 123197160 123197175 STAT2 JASPAR yes 123201439 4264 124292594
chr12 123197161 123197176 FOXP1 JASPAR yes 123201439 4263 124292595
chr12 123197161 123197182 IRF1 JASPAR yes 123201439 4257 124292596
chr12 123197165 123197180 STAT2 JASPAR yes 123201439 4259 124292597
chr12 123197166 123197181 FOXP1 JASPAR yes 123201439 4258 124292598
chr12 123197166 123197187 IRF1 JASPAR yes 123201439 4252 124292599
chr12 123197170 123197185 STAT2 JASPAR yes 123201439 4254 124292600
chr12 123197171 123197186 FOXP1 JASPAR yes 123201439 4253 124292601
chr12 123197171 123197192 IRF1 JASPAR yes 123201439 4247 124292602
chr12 123197175 123197190 STAT2 JASPAR yes 123201439 4249 124292603
chr12 123197176 123197191 FOXP1 JASPAR yes 123201439 4248 124292604
chr12 123197185 123197197 PKNOX1 JASPAR yes 123201439 4242 124292605
chr12 123197185 123197197 PKNOX2 JASPAR yes 123201439 4242 124292606
chr12 123197185 123197197 TGIF1 JASPAR yes 123201439 4242 124292607
chr12 123197185 123197197 TGIF2 JASPAR yes 123201439 4242 124292608
chr12 123197186 123197195 SNAI2 JASPAR yes 123201439 4244 124292609
chr12 123197186 123197196 HEY2 JASPAR yes 123201439 4243 124292610
chr12 123197186 123197196 ID4 JASPAR yes 123201439 4243 124292611
chr12 123197186 123197196 MSC JASPAR yes 123201439 4243 124292612
chr12 123197186 123197196 MYF6 JASPAR yes 123201439 4243 124292613
chr12 123197203 123197224 ZNF263 JASPAR yes 123201439 4215 124292614
chr12 123197220 123197232 ZBTB7A JASPAR yes 123201439 4207 124292615
chr12 123197221 123197233 GLI2 JASPAR yes 123201439 4206 124292616
chr12 123197221 123197233 ZBTB7B JASPAR yes 123201439 4206 124292617
chr12 123197221 123197233 ZBTB7C JASPAR yes 123201439 4206 124292618
chr12 123197227 123197237 NEUROD2 JASPAR yes 123201439 4202 124292619
chr12 123197229 123197242 ZBED1 JASPAR yes 123201439 4197 124292620
chr12 123197235 123197243 MEIS3 JASPAR yes 123201439 4196 124292621
chr12 123197239 123197254 NR2C2 JASPAR yes 123201439 4185 124292622
chr12 123197242 123197246 LFA1 TRANSFAC yes 123201439 4193 124292623
chr12 123197249 123197254 NFY TRANSFAC yes 123201439 4185 124292624
chr12 123197274 123197279 ETS2 TRANSFAC yes 123201439 4160 124292625
chr12 123197275 123197286 NFKB1 JASPAR yes 123201439 4153 124292626
chr12 123197276 123197286 RELA JASPAR yes 123201439 4153 124292627
chr12 123197276 123197286 REL JASPAR yes 123201439 4153 124292628
chr12 123197328 123197332 YY1 TRANSFAC yes 123201439 4107 124292629
chr12 123197338 123197357 CTCF JASPAR yes 123201439 4082 124292630
chr12 123197361 123197367 NFIC JASPAR yes 123201439 4072 124292631
chr12 123197402 123197420 NR3C1 JASPAR yes 123201439 4019 124292632
chr12 123197409 123197424 SOX21 JASPAR yes 123201439 4015 124292633
chr12 123197411 123197415 YY1 TRANSFAC yes 123201439 4024 124292634
chr12 123197416 123197425 SOX9 JASPAR yes 123201439 4014 124292635
chr12 123197431 123197441 SP1 JASPAR yes 123201439 3998 124292636
chr12 123197436 123197449 ELF1 JASPAR yes 123201439 3990 124292637
chr12 123197438 123197449 ETV2 JASPAR yes 123201439 3990 124292638
chr12 123197439 123197449 ERF JASPAR yes 123201439 3990 124292639
chr12 123197439 123197449 ERG JASPAR yes 123201439 3990 124292640
chr12 123197439 123197449 ETS1 JASPAR yes 123201439 3990 124292641
chr12 123197439 123197449 FEV JASPAR yes 123201439 3990 124292642
chr12 123197439 123197449 FLI1 JASPAR yes 123201439 3990 124292643
chr12 123197439 123197450 ELK4 JASPAR yes 123201439 3989 124292644
chr12 123197439 123197450 FLI1 JASPAR yes 123201439 3989 124292645
chr12 123197440 123197448 FEV JASPAR yes 123201439 3991 124292646
chr12 123197467 123197480 EOMES JASPAR yes 123201439 3959 124292647
chr12 123197469 123197479 TBR1 JASPAR yes 123201439 3960 124292648
chr12 123197469 123197480 TBX2 JASPAR yes 123201439 3959 124292649
chr12 123197470 123197480 TBX21 JASPAR yes 123201439 3959 124292650
chr12 123197472 123197482 SREBF1 JASPAR yes 123201439 3957 124292651
chr12 123197480 123197495 HNF4A JASPAR yes 123201439 3944 124292652
chr12 123197481 123197495 NR2F1 JASPAR yes 123201439 3944 124292653
chr12 123197481 123197496 HNF4G JASPAR yes 123201439 3943 124292654
chr12 123197519 123197531 E2F8 JASPAR yes 123201439 3908 124292655
chr12 123197520 123197532 INSM1 JASPAR yes 123201439 3907 124292656
chr12 123197528 123197541 POU2F2 JASPAR yes 123201439 3898 124292657
chr12 123197544 123197559 FOXP1 JASPAR yes 123201439 3880 124292658
chr12 123197550 123197561 BATF JASPAR yes 123201439 3878 124292659
chr12 123197562 123197579 RARA JASPAR yes 123201439 3860 124292660
chr12 123197570 123197581 ESRRA JASPAR yes 123201439 3858 124292661
chr12 123197570 123197581 ESRRB JASPAR yes 123201439 3858 124292662
chr12 123197574 123197578 ESR1 TRANSFAC yes 123201439 3861 124292663
SNPs associated with HCAR3[ENSG00000255398.2], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 123319647 rs112066678 A C 118208 Spleen 0.0204063 2960176
chr12 123186064 rs147030932 C G 13239 Liver 0.203702 2959682
chr12 122448434 rs11043286 C T 750869 Lung 0.187921 2956314
chr12 123444507 rs58843120 G A,T 243068 Stomach 0.105451 2961246
Details of HCAR3[ENSG00000255398.2]
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Genomic Location chr12:123199303-123201439[-]
TSS 123201439
Gene Name HCAR3
Ensembl ID ENSG00000255398.2
ENTREZID 8843
Uniprot
P49019
Protein Name
Hydroxycarboxylic acid receptor 3
Expression levels of HCAR3[ENSG00000255398.2]
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