EnhancerDB
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Enhancers that regulate CLN3[ENSG00000261832.1]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 28496890 28497119 vista22304 28503333 6214
VISTA
chr16 28519171 28519479 vista22305 28503333 15838
VISTA
chr16 28532228 28542715 enh16619 28503333 28895
Bone Marrow (K562) Liver (HepG2) Large Intestine Blood (GM12878) Lung (A549) Stomach Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
chr16 28543579 28543953 vista22306 28503333 40246
VISTA
chr16 28545865 28546104 vista22307 28503333 42532
VISTA
chr16 28554422 28554737 vista22308 28503333 51089
VISTA
chr16 28561805 28575415 enh3962 28503333 58472
Uterus Blood (Karpas-422)
chr16 28582024 28588479 enh64955 28503333 78691
Heart Brain (SK-N-SH) Ovary Uterus Stomach
Transcript facotrs that regulate CLN3[ENSG00000261832.1]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 28494084 28498959 ZNF143 GTRD no Epithelial (MCF-7) 28503333 4374 108190942
chr16 28494898 28498542 TCF7L2 GTRD no Colon (HCT116) 28503333 4791 108190944
SNPs associated with CLN3[ENSG00000261832.1], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of CLN3[ENSG00000261832.1]
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Genomic Location chr16:28477974-28503333[-]
TSS 28503333
Gene Name CLN3
Ensembl ID ENSG00000261832.1
ENTREZID 1201
Uniprot
B4DFF3
Q2TA70
B4DMY6
Q13286
A0A024QZB8
Protein Name
Battenin
CLN3 protein
Mutant CLN3
Expression levels of CLN3[ENSG00000261832.1]
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