EnhancerDB
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  3. vista50165[chr5:172200337-172200842]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50165[chr5:172200337-172200842]
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Tissue distribution of vista50165
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Transcription factor that possibly regulate vista50165[chr5:172200337-172200842]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172200338 172200353 TFAP2C JASPAR yes 70762858
chr5 172200338 172200353 TFAP2C JASPAR yes 111955657
chr5 172200346 172200358 PKNOX2 JASPAR yes 70762859
chr5 172200346 172200358 PKNOX2 JASPAR yes 111955658
chr5 172200347 172200357 ID4 JASPAR yes 70762860
chr5 172200347 172200357 ID4 JASPAR yes 111955659
chr5 172200370 172200391 ZNF263 JASPAR yes 70762861
chr5 172200370 172200391 ZNF263 JASPAR yes 111955660
chr5 172200389 172200400 STAT3 JASPAR yes 70762862
chr5 172200389 172200400 STAT3 JASPAR yes 111955661
chr5 172200417 172200429 TGIF1 JASPAR yes 70762863
chr5 172200417 172200429 TGIF1 JASPAR yes 111955662
chr5 172200419 172200435 SOX4 JASPAR yes 70762864
chr5 172200419 172200435 SOX4 JASPAR yes 111955663
chr5 172200422 172200430 MEIS2 JASPAR yes 70762865
chr5 172200422 172200430 MEIS3 JASPAR yes 70762866
chr5 172200422 172200430 MEIS2 JASPAR yes 111955664
chr5 172200422 172200430 MEIS3 JASPAR yes 111955665
chr5 172200422 172200434 IRF1 JASPAR yes 70762867
chr5 172200422 172200434 IRF1 JASPAR yes 111955666
chr5 172200423 172200427 NFE TRANSFAC yes 70762868
chr5 172200423 172200427 NFE TRANSFAC yes 111955667
chr5 172200427 172200431 YY1 TRANSFAC yes 70762869
chr5 172200427 172200431 YY1 TRANSFAC yes 111955668
chr5 172200440 172200455 NR2C2 JASPAR yes 70762870
chr5 172200440 172200455 NR2C2 JASPAR yes 111955669
chr5 172200441 172200455 RXRB JASPAR yes 70762871
chr5 172200441 172200455 RXRG JASPAR yes 70762872
chr5 172200441 172200455 RXRB JASPAR yes 111955670
chr5 172200441 172200455 RXRG JASPAR yes 111955671
chr5 172200443 172200447 ESR1 TRANSFAC yes 70762873
chr5 172200443 172200447 ESR1 TRANSFAC yes 111955672
chr5 172200459 172200473 ZIC1 JASPAR yes 70762874
chr5 172200459 172200473 ZIC1 JASPAR yes 111955673
chr5 172200459 172200474 ZIC3 JASPAR yes 70762875
chr5 172200459 172200474 ZIC4 JASPAR yes 70762876
chr5 172200459 172200474 ZIC3 JASPAR yes 111955674
chr5 172200459 172200474 ZIC4 JASPAR yes 111955675
chr5 172200514 172200520 LEF1 TRANSFAC yes 70762877
chr5 172200514 172200520 SOX10 JASPAR yes 70762878
chr5 172200514 172200520 LEF1 TRANSFAC yes 111955676
chr5 172200514 172200520 SOX10 JASPAR yes 111955677
chr5 172200545 172200555 ZNF740 JASPAR yes 70762879
chr5 172200545 172200555 ZNF740 JASPAR yes 111955678
chr5 172200558 172200572 NR2F1 JASPAR yes 70762880
chr5 172200558 172200572 NR2F1 JASPAR yes 111955679
chr5 172200567 172200588 ZNF263 JASPAR yes 67824673
chr5 172200567 172200588 ZNF263 JASPAR yes 70762881
chr5 172200567 172200588 ZNF263 JASPAR yes 111955680
chr5 172200586 172200597 CDX2 JASPAR yes 67824674
chr5 172200586 172200597 CDX2 JASPAR yes 70762882
chr5 172200586 172200597 CDX2 JASPAR yes 111955681
chr5 172200587 172200601 PAX6 JASPAR yes 67824675
chr5 172200587 172200601 PAX6 JASPAR yes 70762883
chr5 172200587 172200601 PAX6 JASPAR yes 111955682
chr5 172200589 172200600 FOS JASPAR yes 67824676
chr5 172200589 172200600 FOSL1 JASPAR yes 67824677
chr5 172200589 172200600 JUND JASPAR yes 67824678
chr5 172200589 172200600 FOS JASPAR yes 70762884
chr5 172200589 172200600 FOSL1 JASPAR yes 70762885
chr5 172200589 172200600 JUND JASPAR yes 70762886
chr5 172200589 172200600 FOS JASPAR yes 111955683
chr5 172200589 172200600 FOSL1 JASPAR yes 111955684
chr5 172200589 172200600 JUND JASPAR yes 111955685
chr5 172200590 172200604 JUN JASPAR yes 67824679
chr5 172200590 172200604 JUN JASPAR yes 70762887
chr5 172200590 172200604 JUN JASPAR yes 111955686
chr5 172200600 172200605 GATA1 TRANSFAC yes 67824680
chr5 172200600 172200605 GATA1 TRANSFAC yes 70762888
chr5 172200600 172200605 GATA1 TRANSFAC yes 111955687
chr5 172200605 172200623 IRF2 JASPAR yes 67824681
chr5 172200605 172200623 IRF2 JASPAR yes 70762889
chr5 172200605 172200623 IRF2 JASPAR yes 111955688
chr5 172200607 172200620 NFKB2 JASPAR yes 67824682
chr5 172200607 172200620 NFKB2 JASPAR yes 70762890
chr5 172200607 172200620 NFKB2 JASPAR yes 111955689
chr5 172200608 172200619 NFKB1 JASPAR yes 67824683
chr5 172200608 172200619 NFKB1 JASPAR yes 70762891
chr5 172200608 172200619 NFKB1 JASPAR yes 111955690
chr5 172200608 172200623 STAT2 JASPAR yes 67824684
chr5 172200608 172200623 STAT2 JASPAR yes 70762892
chr5 172200608 172200623 STAT2 JASPAR yes 111955691
chr5 172200609 172200623 STAT1 JASPAR yes 67824685
chr5 172200609 172200623 STAT1 JASPAR yes 70762893
chr5 172200609 172200623 STAT1 JASPAR yes 111955692
chr5 172200616 172200631 STAT1 JASPAR yes 67824686
chr5 172200616 172200631 STAT1 JASPAR yes 70762894
chr5 172200616 172200631 STAT1 JASPAR yes 111955693
chr5 172200618 172200629 STAT1 JASPAR yes 67824687
chr5 172200618 172200629 STAT3 JASPAR yes 67824688
chr5 172200618 172200629 STAT1 JASPAR yes 70762895
chr5 172200618 172200629 STAT3 JASPAR yes 70762896
chr5 172200618 172200629 STAT1 JASPAR yes 111955694
chr5 172200618 172200629 STAT3 JASPAR yes 111955695
chr5 172200641 172200658 ESR1 JASPAR yes 67824689
chr5 172200641 172200658 ESR1 JASPAR yes 70762897
chr5 172200641 172200658 ESR1 JASPAR yes 111955696
chr5 172200641 172200659 ESR2 JASPAR yes 67824690
chr5 172200641 172200659 ESR2 JASPAR yes 70762898
chr5 172200641 172200659 ESR2 JASPAR yes 111955697
chr5 172200677 172200698 REST JASPAR yes 67824691
chr5 172200677 172200698 REST JASPAR yes 70762899
chr5 172200677 172200698 REST JASPAR yes 111955698
chr5 172200678 172200697 REST JASPAR yes 67824692
chr5 172200678 172200697 REST JASPAR yes 70762900
chr5 172200678 172200697 REST JASPAR yes 111955699
chr5 172200684 172200699 NR2C2 JASPAR yes 67824693
chr5 172200684 172200699 NR2C2 JASPAR yes 70762901
chr5 172200684 172200699 NR2C2 JASPAR yes 111955700
chr5 172200690 172200701 ESRRA JASPAR yes 67824694
chr5 172200690 172200701 ESRRB JASPAR yes 67824695
chr5 172200690 172200701 ESRRA JASPAR yes 70762902
chr5 172200690 172200701 ESRRB JASPAR yes 70762903
chr5 172200690 172200701 ESRRA JASPAR yes 111955701
chr5 172200690 172200701 ESRRB JASPAR yes 111955702
chr5 172200692 172200700 NR4A2 JASPAR yes 67824696
chr5 172200692 172200700 NR4A2 JASPAR yes 70762904
chr5 172200692 172200700 NR4A2 JASPAR yes 111955703
chr5 172200692 172200709 ESR1 JASPAR yes 67824697
chr5 172200692 172200709 ESR1 JASPAR yes 70762905
chr5 172200692 172200709 ESR1 JASPAR yes 111955704
chr5 172200694 172200698 ESR1 TRANSFAC yes 67824698
chr5 172200694 172200698 ESR1 TRANSFAC yes 70762906
chr5 172200694 172200698 ESR1 TRANSFAC yes 111955705
chr5 172200705 172200711 YY1 JASPAR yes 67824699
chr5 172200705 172200711 YY1 JASPAR yes 70762907
chr5 172200705 172200711 YY1 JASPAR yes 111955706
chr5 172200736 172200741 SP1 TRANSFAC yes 67824700
chr5 172200736 172200741 SP1 TRANSFAC yes 70762908
chr5 172200736 172200741 SP1 TRANSFAC yes 111955707
chr5 172200774 172200777 MYB TRANSFAC yes 67824701
chr5 172200774 172200777 MYB TRANSFAC yes 70762909
chr5 172200774 172200777 MYB TRANSFAC yes 111955708
chr5 172200796 172200802 ESR1 TRANSFAC yes 67824702
chr5 172200796 172200802 ESR1 TRANSFAC yes 70762910
chr5 172200796 172200802 ESR1 TRANSFAC yes 111955709
chr5 172200798 172200802 ESR1 TRANSFAC yes 67824703
chr5 172200798 172200802 ESR1 TRANSFAC yes 70762911
chr5 172200798 172200802 ESR1 TRANSFAC yes 111955710
chr5 172200798 172200809 USF1 JASPAR yes 67824704
chr5 172200798 172200809 USF2 JASPAR yes 67824705
chr5 172200798 172200809 USF1 JASPAR yes 70762912
chr5 172200798 172200809 USF2 JASPAR yes 70762913
chr5 172200798 172200809 USF1 JASPAR yes 111955711
chr5 172200798 172200809 USF2 JASPAR yes 111955712
chr5 172200799 172200806 USF2 TRANSFAC yes 67824706
chr5 172200799 172200806 USF2 TRANSFAC yes 70762914
chr5 172200799 172200806 USF2 TRANSFAC yes 111955713
chr5 172200801 172200806 USF2 TRANSFAC yes 67824707
chr5 172200801 172200806 USF2 TRANSFAC yes 70762915
chr5 172200801 172200806 USF2 TRANSFAC yes 111955714
chr5 172200804 172200819 RFX5 JASPAR yes 67824708
chr5 172200804 172200819 RFX5 JASPAR yes 70762916
chr5 172200804 172200819 RFX5 JASPAR yes 111955715
chr5 172200813 172200823 NKX2-3 JASPAR yes 67824709
chr5 172200813 172200823 NKX2-3 JASPAR yes 70762917
chr5 172200813 172200823 NKX2-3 JASPAR yes 111955716
chr5 172200833 172200847 PLAG1 JASPAR yes 67824710
chr5 172200833 172200847 PLAG1 JASPAR yes 70762918
chr5 172200833 172200847 PLAG1 JASPAR yes 111955717
SNP sites on vista50165[chr5:172200337-172200842]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172200441 rs143102651 G C
NR2C2 RXRB RXRG
8704656
chr5 172200479 rs374181093 A G no 8704657
chr5 172200512 rs3763068 C T no 8704658
chr5 172200631 rs377227634 A G
STAT1
8704659
chr5 172200678 rs191221 C T
REST
8704660
chr5 172200696 rs148233757 G A
ESR1 ESRRA ESRRB NR2C2 NR4A2 REST
8704661
chr5 172200734 rs3763069 A G no 8704662
chr5 172200769 rs115173938 G A no 8704663
chr5 172200773 rs115252940 A G no 8704664
chr5 172200811 rs12657263 G A
RFX5
8704665
chr5 172200813 rs11956596 C T
NKX2-3 RFX5
8704666
Genes possibly regulated by vista50165[chr5:172200337-172200842]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 97861
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 39564
Expression level of Genes
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miRNAs possibly regulated by vista50165[chr5:172200337-172200842]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results