EnhancerDB
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  3. rs191221[chr5:172200678]
Enhancers that have rs191221[chr5:172200678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172198673 172201009 vista1399
VISTA
chr5 172200337 172200842 vista50165
VISTA
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs191221[chr5:172200678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172200677 172200698 REST JASPAR yes 67824691
chr5 172200677 172200698 REST JASPAR yes 70762899
chr5 172200677 172200698 REST JASPAR yes 111955698
chr5 172200678 172200697 REST JASPAR yes 67824692
chr5 172200678 172200697 REST JASPAR yes 70762900
chr5 172200678 172200697 REST JASPAR yes 111955699
Genes associated with rs191221[chr5:172200678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More