EnhancerDB
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  3. rs377227634[chr5:172200631]
Enhancers that have rs377227634[chr5:172200631]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172198673 172201009 vista1399
VISTA
chr5 172200337 172200842 vista50165
VISTA
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs377227634[chr5:172200631]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172200616 172200631 STAT1 JASPAR yes 67824686
chr5 172200616 172200631 STAT1 JASPAR yes 70762894
chr5 172200616 172200631 STAT1 JASPAR yes 111955693
Genes associated with rs377227634[chr5:172200631], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More