EnhancerDB
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  3. rs148233757[chr5:172200696]
Enhancers that have rs148233757[chr5:172200696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172198673 172201009 vista1399
VISTA
chr5 172200337 172200842 vista50165
VISTA
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs148233757[chr5:172200696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172200677 172200698 REST JASPAR yes 67824691
chr5 172200677 172200698 REST JASPAR yes 70762899
chr5 172200677 172200698 REST JASPAR yes 111955698
chr5 172200678 172200697 REST JASPAR yes 67824692
chr5 172200678 172200697 REST JASPAR yes 70762900
chr5 172200678 172200697 REST JASPAR yes 111955699
chr5 172200684 172200699 NR2C2 JASPAR yes 67824693
chr5 172200684 172200699 NR2C2 JASPAR yes 70762901
chr5 172200684 172200699 NR2C2 JASPAR yes 111955700
chr5 172200690 172200701 ESRRA JASPAR yes 67824694
chr5 172200690 172200701 ESRRB JASPAR yes 67824695
chr5 172200690 172200701 ESRRA JASPAR yes 70762902
chr5 172200690 172200701 ESRRB JASPAR yes 70762903
chr5 172200690 172200701 ESRRA JASPAR yes 111955701
chr5 172200690 172200701 ESRRB JASPAR yes 111955702
chr5 172200692 172200700 NR4A2 JASPAR yes 67824696
chr5 172200692 172200700 NR4A2 JASPAR yes 70762904
chr5 172200692 172200700 NR4A2 JASPAR yes 111955703
chr5 172200692 172200709 ESR1 JASPAR yes 67824697
chr5 172200692 172200709 ESR1 JASPAR yes 70762905
chr5 172200692 172200709 ESR1 JASPAR yes 111955704
chr5 172200694 172200698 ESR1 TRANSFAC yes 67824698
chr5 172200694 172200698 ESR1 TRANSFAC yes 70762906
chr5 172200694 172200698 ESR1 TRANSFAC yes 111955705
Genes associated with rs148233757[chr5:172200696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More