EnhancerDB
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  3. vista5462[chr1:229357329-229357959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5462[chr1:229357329-229357959]
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Tissue distribution of vista5462
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Transcription factor that possibly regulate vista5462[chr1:229357329-229357959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229356858 229357703 TCF7L2 UCSC Txn Factor no Conserved 107877940
chr1 229356868 229357652 TCF12 UCSC Txn Factor no Conserved 107877942
chr1 229356925 229357712 EP300 UCSC Txn Factor no Conserved 107877946
chr1 229357239 229357653 NFIC UCSC Txn Factor no Conserved 107877967
chr1 229357261 229357668 FOXA1 UCSC Txn Factor no Conserved 107877971
chr1 229357263 229357578 TFAP2C UCSC Txn Factor no Conserved 107877973
chr1 229357336 229357347 RUNX1 JASPAR yes 35976215
chr1 229357336 229357347 RUNX1 JASPAR yes 118475972
chr1 229357344 229357348 YY1 TRANSFAC yes 35976216
chr1 229357344 229357348 YY1 TRANSFAC yes 118475973
chr1 229357344 229357354 HOXD11 JASPAR yes 35976217
chr1 229357344 229357354 HOXD11 JASPAR yes 118475974
chr1 229357344 229357355 HOXC12 JASPAR yes 35976218
chr1 229357344 229357355 HOXC12 JASPAR yes 118475975
chr1 229357357 229357363 TCF4 TRANSFAC yes 35976219
chr1 229357357 229357363 TCF4 TRANSFAC yes 118475976
chr1 229357362 229357377 NR2C2 JASPAR yes 35976220
chr1 229357362 229357377 NR2C2 JASPAR yes 118475977
chr1 229357373 229357382 NKX2-8 JASPAR yes 35976221
chr1 229357373 229357382 NKX2-8 JASPAR yes 118475978
chr1 229357373 229357383 NKX2-3 JASPAR yes 35976222
chr1 229357373 229357383 NKX2-3 JASPAR yes 118475979
chr1 229357381 229357398 BCL6B JASPAR yes 35976223
chr1 229357381 229357398 BCL6B JASPAR yes 118475980
chr1 229357390 229357404 FOXF2 JASPAR yes 35976224
chr1 229357390 229357404 FOXF2 JASPAR yes 118475981
chr1 229357390 229357405 FOXP1 JASPAR yes 35976225
chr1 229357390 229357405 FOXP1 JASPAR yes 118475982
chr1 229357391 229357402 FOXA1 JASPAR yes 35976226
chr1 229357391 229357402 FOXA1 JASPAR yes 118475983
chr1 229357391 229357406 FOXA1 JASPAR yes 35976227
chr1 229357391 229357406 FOXA1 JASPAR yes 118475984
chr1 229357392 229357403 FOXB1 JASPAR yes 35976228
chr1 229357392 229357403 FOXC1 JASPAR yes 35976229
chr1 229357392 229357403 FOXB1 JASPAR yes 118475985
chr1 229357392 229357403 FOXC1 JASPAR yes 118475986
chr1 229357392 229357404 FOXC2 JASPAR yes 35976230
chr1 229357392 229357404 FOXC2 JASPAR yes 118475987
chr1 229357393 229357404 FOXP2 JASPAR yes 35976231
chr1 229357393 229357404 FOXP2 JASPAR yes 118475988
chr1 229357395 229357402 FOXD2 JASPAR yes 35976232
chr1 229357395 229357402 FOXI1 JASPAR yes 35976233
chr1 229357395 229357402 FOXL1 JASPAR yes 35976234
chr1 229357395 229357402 FOXO4 JASPAR yes 35976235
chr1 229357395 229357402 FOXO6 JASPAR yes 35976236
chr1 229357395 229357402 FOXP3 JASPAR yes 35976237
chr1 229357395 229357402 FOXD2 JASPAR yes 118475989
chr1 229357395 229357402 FOXI1 JASPAR yes 118475990
chr1 229357395 229357402 FOXL1 JASPAR yes 118475991
chr1 229357395 229357402 FOXO4 JASPAR yes 118475992
chr1 229357395 229357402 FOXO6 JASPAR yes 118475993
chr1 229357395 229357402 FOXP3 JASPAR yes 118475994
chr1 229357395 229357403 FOXD1 JASPAR yes 35976238
chr1 229357395 229357403 FOXG1 JASPAR yes 35976239
chr1 229357395 229357403 FOXO3 JASPAR yes 35976240
chr1 229357395 229357403 FOXD1 JASPAR yes 118475995
chr1 229357395 229357403 FOXG1 JASPAR yes 118475996
chr1 229357395 229357403 FOXO3 JASPAR yes 118475997
chr1 229357398 229357414 SOX4 JASPAR yes 35976241
chr1 229357398 229357414 SOX4 JASPAR yes 118475998
chr1 229357414 229357428 SPI1 JASPAR yes 35976242
chr1 229357414 229357428 SPI1 JASPAR yes 118475999
chr1 229357424 229357436 TFAP2A JASPAR yes 35976243
chr1 229357424 229357436 TFAP2B JASPAR yes 35976244
chr1 229357424 229357436 TFAP2C JASPAR yes 35976245
chr1 229357424 229357436 TFAP2A JASPAR yes 118476000
chr1 229357424 229357436 TFAP2B JASPAR yes 118476001
chr1 229357424 229357436 TFAP2C JASPAR yes 118476002
chr1 229357424 229357439 TFAP2A JASPAR yes 35976246
chr1 229357424 229357439 TFAP2A JASPAR yes 118476003
chr1 229357436 229357440 YY1 TRANSFAC yes 35976247
chr1 229357436 229357440 YY1 TRANSFAC yes 118476004
chr1 229357438 229357457 RFX2 JASPAR yes 35976248
chr1 229357438 229357457 RFX2 JASPAR yes 118476005
chr1 229357444 229357450 NFIC JASPAR yes 35976249
chr1 229357444 229357450 NFIC JASPAR yes 118476006
chr1 229357444 229357458 TLX1 JASPAR yes 35976250
chr1 229357444 229357458 TLX1 JASPAR yes 118476007
chr1 229357445 229357459 TLX1 JASPAR yes 35976251
chr1 229357445 229357459 TLX1 JASPAR yes 118476008
chr1 229357460 229357464 YY1 TRANSFAC yes 35976252
chr1 229357460 229357464 YY1 TRANSFAC yes 118476009
chr1 229357464 229357480 RFX5 JASPAR yes 35976253
chr1 229357464 229357480 RFX5 JASPAR yes 118476010
chr1 229357466 229357471 ETS2 TRANSFAC yes 35976254
chr1 229357466 229357471 ETS2 TRANSFAC yes 118476011
chr1 229357470 229357479 NFIX JASPAR yes 35976255
chr1 229357470 229357479 NFIX JASPAR yes 118476012
chr1 229357471 229357477 NFIC JASPAR yes 35976256
chr1 229357471 229357477 NFIC JASPAR yes 118476013
chr1 229357488 229357492 YY1 TRANSFAC yes 35976257
chr1 229357488 229357492 YY1 TRANSFAC yes 118476014
chr1 229357491 229357499 LBX1 JASPAR yes 35976258
chr1 229357491 229357499 LBX1 JASPAR yes 118476015
chr1 229357492 229357495 MYB TRANSFAC yes 35976259
chr1 229357492 229357495 MYB TRANSFAC yes 118476016
chr1 229357493 229357514 IRF1 JASPAR yes 35976260
chr1 229357493 229357514 IRF1 JASPAR yes 118476017
chr1 229357511 229357522 PHOX2A JASPAR yes 35976261
chr1 229357511 229357522 PHOX2A JASPAR yes 118476018
chr1 229357514 229357524 GSX2 JASPAR yes 35976262
chr1 229357514 229357524 GSX2 JASPAR yes 118476019
chr1 229357515 229357523 BARX1 JASPAR yes 35976263
chr1 229357515 229357523 BARX1 JASPAR yes 118476020
chr1 229357532 229357547 FOXA1 JASPAR yes 35976264
chr1 229357532 229357547 FOXA1 JASPAR yes 118476021
chr1 229357548 229357561 ELF3 JASPAR yes 35976265
chr1 229357548 229357561 ELF3 JASPAR yes 118476022
chr1 229357549 229357560 ELF5 JASPAR yes 35976266
chr1 229357549 229357560 ELF5 JASPAR yes 118476023
chr1 229357550 229357560 GABPA JASPAR yes 35976267
chr1 229357550 229357560 GABPA JASPAR yes 118476024
chr1 229357552 229357558 ETS1 JASPAR yes 35976268
chr1 229357552 229357558 SPI1 JASPAR yes 35976269
chr1 229357552 229357558 ETS1 JASPAR yes 118476025
chr1 229357552 229357558 SPI1 JASPAR yes 118476026
chr1 229357557 229357567 SP1 JASPAR yes 35976270
chr1 229357557 229357567 SP1 JASPAR yes 118476027
chr1 229357566 229357569 MYB TRANSFAC yes 35976271
chr1 229357566 229357569 MYB TRANSFAC yes 118476028
chr1 229357570 229357581 NFKB1 JASPAR yes 35976272
chr1 229357570 229357581 NFKB1 JASPAR yes 118476029
chr1 229357600 229357606 MYC TRANSFAC yes 35976273
chr1 229357600 229357606 MYC TRANSFAC yes 118476030
chr1 229357610 229357621 FOXP2 JASPAR yes 35976274
chr1 229357610 229357621 FOXP2 JASPAR yes 118476031
chr1 229357630 229357645 HNF4G JASPAR yes 35976275
chr1 229357630 229357645 HNF4G JASPAR yes 118476032
chr1 229357635 229357646 ESRRB JASPAR yes 35976276
chr1 229357635 229357646 ESRRB JASPAR yes 118476033
chr1 229357640 229357652 HNF1B JASPAR yes 35976277
chr1 229357640 229357652 HNF1B JASPAR yes 118476034
chr1 229357643 229357651 HOXA5 JASPAR yes 35976278
chr1 229357643 229357651 HOXA5 JASPAR yes 118476035
chr1 229357663 229357673 GABPA JASPAR yes 35976279
chr1 229357663 229357673 GABPA JASPAR yes 118476036
chr1 229357663 229357676 ELF1 JASPAR yes 35976280
chr1 229357663 229357676 ELF1 JASPAR yes 118476037
chr1 229357663 229357677 SPI1 JASPAR yes 35976281
chr1 229357663 229357677 SPIC JASPAR yes 35976282
chr1 229357663 229357677 SPI1 JASPAR yes 118476038
chr1 229357663 229357677 SPIC JASPAR yes 118476039
chr1 229357666 229357673 SPIB JASPAR yes 35976283
chr1 229357666 229357673 SPIB JASPAR yes 118476040
chr1 229357670 229357685 FOXA1 JASPAR yes 35976284
chr1 229357670 229357685 FOXA1 JASPAR yes 118476041
chr1 229357672 229357684 FOXC2 JASPAR yes 35976285
chr1 229357672 229357684 FOXC2 JASPAR yes 118476042
chr1 229357672 229357685 POU2F2 JASPAR yes 35976286
chr1 229357672 229357685 POU2F2 JASPAR yes 118476043
chr1 229357672 229357686 POU1F1 JASPAR yes 35976287
chr1 229357672 229357686 POU1F1 JASPAR yes 118476044
chr1 229357673 229357684 FOXB1 JASPAR yes 35976288
chr1 229357673 229357684 FOXC1 JASPAR yes 35976289
chr1 229357673 229357684 FOXB1 JASPAR yes 118476045
chr1 229357673 229357684 FOXC1 JASPAR yes 118476046
chr1 229357673 229357685 POU3F1 JASPAR yes 35976290
chr1 229357673 229357685 POU3F2 JASPAR yes 35976291
chr1 229357673 229357685 POU3F1 JASPAR yes 118476047
chr1 229357673 229357685 POU3F2 JASPAR yes 118476048
chr1 229357673 229357686 POU3F3 JASPAR yes 35976292
chr1 229357673 229357686 POU3F3 JASPAR yes 118476049
chr1 229357674 229357678 YY1 TRANSFAC yes 35976293
chr1 229357674 229357678 YY1 TRANSFAC yes 118476050
chr1 229357674 229357685 FOXA1 JASPAR yes 35976294
chr1 229357674 229357685 FOXA1 JASPAR yes 118476051
chr1 229357674 229357686 POU2F1 JASPAR yes 35976295
chr1 229357674 229357686 POU2F1 JASPAR yes 118476052
chr1 229357675 229357682 POU2F1 TRANSFAC yes 35976296
chr1 229357675 229357682 POU2F2C TRANSFAC yes 35976297
chr1 229357675 229357682 POU2F2 TRANSFAC yes 35976298
chr1 229357675 229357682 POU2F1 TRANSFAC yes 118476053
chr1 229357675 229357682 POU2F2C TRANSFAC yes 118476054
chr1 229357675 229357682 POU2F2 TRANSFAC yes 118476055
chr1 229357675 229357683 POU2F1 TRANSFAC yes 35976299
chr1 229357675 229357683 POU2F1 TRANSFAC yes 118476056
chr1 229357675 229357684 POU3F4 JASPAR yes 35976300
chr1 229357675 229357684 POU5F1B JASPAR yes 35976301
chr1 229357675 229357684 POU3F4 JASPAR yes 118476057
chr1 229357675 229357684 POU5F1B JASPAR yes 118476058
chr1 229357678 229357695 BCL6B JASPAR yes 35976302
chr1 229357678 229357695 BCL6B JASPAR yes 118476059
chr1 229357679 229357694 STAT1 JASPAR yes 35976303
chr1 229357679 229357694 STAT1 JASPAR yes 118476060
chr1 229357680 229357684 YY1 TRANSFAC yes 35976304
chr1 229357680 229357684 YY1 TRANSFAC yes 118476061
chr1 229357681 229357692 STAT1 JASPAR yes 35976305
chr1 229357681 229357692 STAT1 JASPAR yes 118476062
chr1 229357682 229357693 STAT3 JASPAR yes 35976306
chr1 229357682 229357693 STAT3 JASPAR yes 118476063
chr1 229357686 229357707 ZNF263 JASPAR yes 35976307
chr1 229357686 229357707 ZNF263 JASPAR yes 118476064
chr1 229357689 229357700 FLI1 JASPAR yes 35976308
chr1 229357689 229357700 FLI1 JASPAR yes 118476065
chr1 229357689 229357710 ZNF263 JASPAR yes 35976309
chr1 229357689 229357710 ZNF263 JASPAR yes 118476066
chr1 229357690 229357695 ETS2 TRANSFAC yes 35976310
chr1 229357690 229357695 ETS2 TRANSFAC yes 118476067
chr1 229357690 229357698 EHF JASPAR yes 35976311
chr1 229357690 229357698 EHF JASPAR yes 118476068
chr1 229357698 229357708 SP1 JASPAR yes 35976312
chr1 229357698 229357708 SP1 JASPAR yes 118476069
chr1 229357708 229357712 TEAD2 TRANSFAC yes 35976313
chr1 229357708 229357712 TEAD2 TRANSFAC yes 118476070
chr1 229357710 229357717 NKX3-1 JASPAR yes 35976314
chr1 229357710 229357717 NKX3-1 JASPAR yes 118476071
chr1 229357710 229357721 FOXB1 JASPAR yes 35976315
chr1 229357710 229357721 FOXB1 JASPAR yes 118476072
chr1 229357719 229357728 SRY JASPAR yes 35976316
chr1 229357719 229357728 SRY JASPAR yes 118476073
chr1 229357742 229357747 GATA2 JASPAR yes 35976317
chr1 229357742 229357747 GATA2 JASPAR yes 118476074
chr1 229357759 229357765 ZNF354C JASPAR yes 35976318
chr1 229357759 229357765 ZNF354C JASPAR yes 118476075
chr1 229357763 229357771 FOXD1 JASPAR yes 35976319
chr1 229357763 229357771 FOXG1 JASPAR yes 35976320
chr1 229357763 229357771 FOXO3 JASPAR yes 35976321
chr1 229357763 229357771 FOXD1 JASPAR yes 118476076
chr1 229357763 229357771 FOXG1 JASPAR yes 118476077
chr1 229357763 229357771 FOXO3 JASPAR yes 118476078
chr1 229357764 229357771 FOXD2 JASPAR yes 35976322
chr1 229357764 229357771 FOXI1 JASPAR yes 35976323
chr1 229357764 229357771 FOXL1 JASPAR yes 35976324
chr1 229357764 229357771 FOXO4 JASPAR yes 35976325
chr1 229357764 229357771 FOXO6 JASPAR yes 35976326
chr1 229357764 229357771 FOXP3 JASPAR yes 35976327
chr1 229357764 229357771 FOXD2 JASPAR yes 118476079
chr1 229357764 229357771 FOXI1 JASPAR yes 118476080
chr1 229357764 229357771 FOXL1 JASPAR yes 118476081
chr1 229357764 229357771 FOXO4 JASPAR yes 118476082
chr1 229357764 229357771 FOXO6 JASPAR yes 118476083
chr1 229357764 229357771 FOXP3 JASPAR yes 118476084
chr1 229357764 229357772 FOXO3 JASPAR yes 35976328
chr1 229357764 229357772 FOXO3 JASPAR yes 118476085
chr1 229357790 229357796 HiNF-A TRANSFAC yes 35976329
chr1 229357790 229357796 HiNF-A TRANSFAC yes 118476086
chr1 229357795 229357799 YY1 TRANSFAC yes 35976330
chr1 229357795 229357799 YY1 TRANSFAC yes 118476087
chr1 229357847 229357858 FOXB1 JASPAR yes 35976331
chr1 229357847 229357858 FOXB1 JASPAR yes 118476088
chr1 229357848 229357852 YY1 TRANSFAC yes 35976332
chr1 229357848 229357852 YY1 TRANSFAC yes 118476089
chr1 229357861 229357878 RXRA JASPAR yes 35976333
chr1 229357861 229357878 RXRA JASPAR yes 118476090
chr1 229357864 229357877 POU2F2 JASPAR yes 35976334
chr1 229357864 229357877 POU2F2 JASPAR yes 118476091
chr1 229357866 229357880 IRF8 JASPAR yes 35976335
chr1 229357866 229357880 IRF8 JASPAR yes 118476092
chr1 229357879 229357882 MYB TRANSFAC yes 35976336
chr1 229357879 229357882 MYB TRANSFAC yes 118476093
chr1 229357908 229357912 YY1 TRANSFAC yes 35976337
chr1 229357908 229357912 YY1 TRANSFAC yes 118476094
chr1 229357920 229357924 YY1 TRANSFAC yes 35976338
chr1 229357920 229357924 YY1 TRANSFAC yes 118476095
chr1 229357927 229357948 IRF1 JASPAR yes 35976339
chr1 229357927 229357948 IRF1 JASPAR yes 118476096
chr1 229357928 229357949 IRF1 JASPAR yes 35976340
chr1 229357928 229357949 IRF1 JASPAR yes 118476097
chr1 229357929 229357950 IRF1 JASPAR yes 35976341
chr1 229357929 229357950 IRF1 JASPAR yes 118476098
chr1 229357930 229357945 FOXP1 JASPAR yes 35976342
chr1 229357930 229357945 FOXP1 JASPAR yes 118476099
chr1 229357932 229357947 FOXP1 JASPAR yes 35976343
chr1 229357932 229357947 FOXP1 JASPAR yes 118476100
chr1 229357932 229357953 IRF1 JASPAR yes 35976344
chr1 229357932 229357953 IRF1 JASPAR yes 118476101
chr1 229357933 229357948 FOXP1 JASPAR yes 35976345
chr1 229357933 229357948 FOXP1 JASPAR yes 118476102
chr1 229357933 229357954 IRF1 JASPAR yes 35976346
chr1 229357933 229357954 IRF1 JASPAR yes 118476103
chr1 229357934 229357949 FOXP1 JASPAR yes 35976347
chr1 229357934 229357949 FOXP1 JASPAR yes 118476104
chr1 229357934 229357955 IRF1 JASPAR yes 35976348
chr1 229357934 229357955 IRF1 JASPAR yes 118476105
chr1 229357935 229357950 FOXP1 JASPAR yes 35976349
chr1 229357935 229357950 FOXP1 JASPAR yes 118476106
chr1 229357936 229357951 FOXP1 JASPAR yes 35976350
chr1 229357936 229357951 FOXP1 JASPAR yes 118476107
chr1 229357937 229357952 FOXP1 JASPAR yes 35976351
chr1 229357937 229357952 FOXP1 JASPAR yes 118476108
chr1 229357938 229357953 FOXP1 JASPAR yes 35976352
chr1 229357938 229357953 FOXP1 JASPAR yes 118476109
chr1 229357939 229357954 FOXP1 JASPAR yes 35976353
chr1 229357939 229357954 FOXP1 JASPAR yes 118476110
chr1 229357940 229357955 FOXP1 JASPAR yes 35976354
chr1 229357940 229357955 FOXP1 JASPAR yes 118476111
chr1 229357940 229357961 IRF1 JASPAR yes 35976355
chr1 229357940 229357961 IRF1 JASPAR yes 118476112
chr1 229357941 229357954 POU2F2 JASPAR yes 35976356
chr1 229357941 229357954 POU2F2 JASPAR yes 118476113
chr1 229357944 229357956 IRF1 JASPAR yes 35976357
chr1 229357944 229357956 IRF1 JASPAR yes 118476114
chr1 229357944 229357958 IRF7 JASPAR yes 35976358
chr1 229357944 229357958 IRF7 JASPAR yes 118476115
chr1 229357949 229357953 YY1 TRANSFAC yes 35976359
chr1 229357949 229357953 YY1 TRANSFAC yes 118476116
chr1 229357958 229357970 GRHL1 JASPAR yes 35976360
chr1 229357958 229357970 GRHL1 JASPAR yes 118476117
SNP sites on vista5462[chr1:229357329-229357959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229357393 rs6693795 A G
BCL6B EP300 FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXP1 FOXP2 NFIC TCF12 TCF7L2 TFAP2C
1009506
chr1 229357504 rs114558341 A G
EP300 FOXA1 IRF1 NFIC TCF12 TCF7L2 TFAP2C
1009507
chr1 229357533 rs6688259 T C
EP300 FOXA1 NFIC TCF12 TCF7L2 TFAP2C
1009508
chr1 229357563 rs188144365 G A
EP300 FOXA1 NFIC SP1 TCF12 TCF7L2 TFAP2C
1009509
chr1 229357765 rs6688490 T A
FOXD1 FOXD2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP3 ZNF354C
1009510
chr1 229357823 rs574366527 T TACAC no 1009511
chr1 229357823 rs753189738 T TACAC no 1009512
chr1 229357920 rs540613979 C G,T
YY1
1009513
chr1 229357933 rs573598801 CT C
FOXP1 IRF1
1009514
Genes possibly regulated by vista5462[chr1:229357329-229357959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229385383 229387557 + TMEM78 ENSG00000177800.2 229385383 0.93 0.96 1928 72576
chr1 229406822 229441641 + RAB4A ENSG00000168118.7 229406822 0.61 1.0 1929 51137
chr1 229440129 229441248 + SPHAR ENSG00000213029.2 229440129 0.0 0.0 1930 17830
Expression level of Genes
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miRNAs possibly regulated by vista5462[chr1:229357329-229357959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results