EnhancerDB
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  3. rs540613979[chr1:229357920]
Enhancers that have rs540613979[chr1:229357920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 229357329 229357959 vista5462
VISTA
Transcript factors that have rs540613979[chr1:229357920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229357920 229357924 YY1 TRANSFAC yes 35976338
chr1 229357920 229357924 YY1 TRANSFAC yes 118476095
Genes associated with rs540613979[chr1:229357920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More