EnhancerDB
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  3. rs573598801[chr1:229357933]
Enhancers that have rs573598801[chr1:229357933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 229357329 229357959 vista5462
VISTA
Transcript factors that have rs573598801[chr1:229357933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229357927 229357948 IRF1 JASPAR yes 35976339
chr1 229357927 229357948 IRF1 JASPAR yes 118476096
chr1 229357928 229357949 IRF1 JASPAR yes 35976340
chr1 229357928 229357949 IRF1 JASPAR yes 118476097
chr1 229357929 229357950 IRF1 JASPAR yes 35976341
chr1 229357929 229357950 IRF1 JASPAR yes 118476098
chr1 229357930 229357945 FOXP1 JASPAR yes 35976342
chr1 229357930 229357945 FOXP1 JASPAR yes 118476099
chr1 229357932 229357947 FOXP1 JASPAR yes 35976343
chr1 229357932 229357947 FOXP1 JASPAR yes 118476100
chr1 229357932 229357953 IRF1 JASPAR yes 35976344
chr1 229357932 229357953 IRF1 JASPAR yes 118476101
chr1 229357933 229357948 FOXP1 JASPAR yes 35976345
chr1 229357933 229357948 FOXP1 JASPAR yes 118476102
chr1 229357933 229357954 IRF1 JASPAR yes 35976346
chr1 229357933 229357954 IRF1 JASPAR yes 118476103
Genes associated with rs573598801[chr1:229357933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More