EnhancerDB
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  3. rs6688490[chr1:229357765]
Enhancers that have rs6688490[chr1:229357765]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 229357329 229357959 vista5462
VISTA
Transcript factors that have rs6688490[chr1:229357765]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229357143 229357799 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877962
chr1 229357305 229357869 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390807
chr1 229357305 229357869 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877978
chr1 229357759 229357765 ZNF354C JASPAR yes 35976318
chr1 229357759 229357765 ZNF354C JASPAR yes 118476075
chr1 229357763 229357771 FOXD1 JASPAR yes 35976319
chr1 229357763 229357771 FOXG1 JASPAR yes 35976320
chr1 229357763 229357771 FOXO3 JASPAR yes 35976321
chr1 229357763 229357771 FOXD1 JASPAR yes 118476076
chr1 229357763 229357771 FOXG1 JASPAR yes 118476077
chr1 229357763 229357771 FOXO3 JASPAR yes 118476078
chr1 229357764 229357771 FOXD2 JASPAR yes 35976322
chr1 229357764 229357771 FOXI1 JASPAR yes 35976323
chr1 229357764 229357771 FOXL1 JASPAR yes 35976324
chr1 229357764 229357771 FOXO4 JASPAR yes 35976325
chr1 229357764 229357771 FOXO6 JASPAR yes 35976326
chr1 229357764 229357771 FOXP3 JASPAR yes 35976327
chr1 229357764 229357771 FOXD2 JASPAR yes 118476079
chr1 229357764 229357771 FOXI1 JASPAR yes 118476080
chr1 229357764 229357771 FOXL1 JASPAR yes 118476081
chr1 229357764 229357771 FOXO4 JASPAR yes 118476082
chr1 229357764 229357771 FOXO6 JASPAR yes 118476083
chr1 229357764 229357771 FOXP3 JASPAR yes 118476084
chr1 229357764 229357772 FOXO3 JASPAR yes 35976328
chr1 229357764 229357772 FOXO3 JASPAR yes 118476085
Genes associated with rs6688490[chr1:229357765], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More