EnhancerDB
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Enhancers that have rs1002136[chr17:2098006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1002136[chr17:2098006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2097985 2098006 IRF1 JASPAR yes 52735126
chr17 2097987 2098007 RREB1 JASPAR yes 52735131
chr17 2097990 2098011 IRF1 JASPAR yes 52735139
chr17 2097992 2098012 RREB1 JASPAR yes 52735140
chr17 2097995 2098007 IRF1 JASPAR yes 52735141
chr17 2097995 2098010 FOXP1 JASPAR yes 52735142
chr17 2097996 2098017 IRF1 JASPAR yes 52735143
chr17 2097997 2098017 RREB1 JASPAR yes 52735144
chr17 2098000 2098015 FOXP1 JASPAR yes 52735145
chr17 2098001 2098022 IRF1 JASPAR yes 52735146
chr17 2098002 2098017 FOXP1 JASPAR yes 52735147
chr17 2098002 2098023 IRF1 JASPAR yes 52735148
chr17 2098003 2098018 FOXP1 JASPAR yes 52735149
chr17 2098005 2098020 FOXP1 JASPAR yes 52735150
chr17 2098006 2098027 IRF1 JASPAR yes 52735151
Genes associated with rs1002136[chr17:2098006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More