EnhancerDB
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  3. rs10140678[chr14:65084041]
Enhancers that have rs10140678[chr14:65084041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 65075625 65118315 enh15680
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs10140678[chr14:65084041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 65084032 65084043 PHOX2A JASPAR yes 116000133
chr14 65084035 65084045 EN2 JASPAR yes 116000134
chr14 65084035 65084045 GBX2 JASPAR yes 116000135
chr14 65084035 65084045 HESX1 JASPAR yes 116000136
chr14 65084035 65084045 LBX2 JASPAR yes 116000137
chr14 65084036 65084044 LHX9 JASPAR yes 116000138
chr14 65084036 65084044 SHOX JASPAR yes 116000139
Genes associated with rs10140678[chr14:65084041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr14 65002623 65009955 + HSPA2 ENSG00000126803.8 65002623 74086 Spleen 0.0105603 13395
chr14 65002623 65009955 + HSPA2 ENSG00000126803.8 65002623 74086 Lung 1.35651e-08 13395