EnhancerDB
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  3. rs10160979[chr12:52519336]
Enhancers that have rs10160979[chr12:52519336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs10160979[chr12:52519336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52518275 52519891 AR GTRD no Prostate (PC-3) 21546230
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519165 52519501 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546232
chr12 52519221 52519545 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546233
chr12 52519223 52519499 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546234
chr12 52519242 52519552 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546235
chr12 52519254 52519610 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546236
chr12 52519280 52519496 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546237
chr12 52519289 52519545 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546238
chr12 52519308 52519653 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546239
chr12 52519322 52519342 RREB1 JASPAR yes 120919454
chr12 52519332 52519342 SP1 JASPAR yes 120919455
Genes associated with rs10160979[chr12:52519336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More