EnhancerDB
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  3. rs1016270[chr1:235061547]
Enhancers that have rs1016270[chr1:235061547]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235041625 235072655 enh12798
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1016270[chr1:235061547]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 21400362
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 107883952
chr1 235059804 235061588 ZNF143 GTRD no Epithelial (MCF-7) 21400364
chr1 235060113 235061605 ZNF143 GTRD no Epithelial (MCF-7) 21400365
chr1 235060150 235061799 ZNF143 GTRD no Epithelial (MCF-7) 21400366
chr1 235060256 235061815 ZNF143 GTRD no Epithelial (MCF-7) 21400373
chr1 235060277 235061838 ZNF143 GTRD no Epithelial (MCF-7) 21400377
chr1 235060281 235061826 ZNF143 GTRD no Epithelial (MCF-7) 21400378
chr1 235060351 235061696 ZNF274 GTRD no Liver (HepG2) 21400386
chr1 235060381 235061962 ZNF143 GTRD no Epithelial (MCF-7) 21400390
chr1 235060437 235061923 ZNF143 GTRD no Epithelial (MCF-7) 21400400
chr1 235060458 235062105 ZNF274 GTRD no Liver (HepG2) 21400405
chr1 235060649 235061584 ZNF143 GTRD no Epithelial (MCF-7) 21400424
chr1 235060656 235061749 ZNF274 GTRD no Blood (GM12878) 21400425
chr1 235060687 235061636 ZNF274 GTRD no Liver (HepG2) 21400427
chr1 235060797 235061652 ZNF274 GTRD no Liver (HepG2) 21400431
chr1 235060822 235062114 ZNF274 GTRD no Blood (GM12878) 21400432
chr1 235060830 235061654 ZNF274 GTRD no Liver (HepG2) 21400433
chr1 235060839 235061547 ZNF274 GTRD no Liver (HepG2) 21400434
chr1 235060892 235062083 ZNF274 GTRD no Blood (GM12878) 21400435
chr1 235060935 235061753 ZNF274 GTRD no Liver (HepG2) 21400437
chr1 235060983 235061744 ZNF274 GTRD no Liver (HepG2) 21400438
chr1 235061035 235061550 SOX2 GTRD no Neural Stem Cells (H9) 21400439
chr1 235061041 235061617 ZNF274 GTRD no Liver (HepG2) 21400440
chr1 235061100 235061752 ZNF274 GTRD no Liver (HepG2) 21400441
chr1 235061196 235061572 SOX2 GTRD no Neural Stem Cells (H9) 21400443
chr1 235061200 235061660 ZNF143 GTRD no Epithelial (MCF-7) 21400444
chr1 235061440 235061910 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21400445
chr1 235061512 235062108 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21400446
chr1 235061528 235061968 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21400447
Genes associated with rs1016270[chr1:235061547], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More