EnhancerDB
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  3. rs10167410[chr2:102348654]
Enhancers that have rs10167410[chr2:102348654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10167410[chr2:102348654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102348640 102348660 PPARG JASPAR yes 75832260
chr2 102348648 102348667 REST JASPAR yes 75832261
chr2 102348650 102348665 TFAP2A JASPAR yes 75832262
chr2 102348653 102348665 TFAP2A JASPAR yes 75832263
chr2 102348653 102348665 TFAP2B JASPAR yes 75832264
chr2 102348653 102348665 TFAP2C JASPAR yes 75832265
chr2 102348653 102348668 TFAP2A JASPAR yes 75832266
chr2 102348653 102348668 TFAP2C JASPAR yes 75832267
chr2 102348654 102348663 TFAP2A JASPAR yes 75832268
Genes associated with rs10167410[chr2:102348654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More