EnhancerDB
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  3. rs1017528[chr17:56012551]
Enhancers that have rs1017528[chr17:56012551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1017528[chr17:56012551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56012269 56012845 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274759
chr17 56012479 56013023 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773865
chr17 56012479 56013023 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274760
chr17 56012541 56012551 GSX2 JASPAR yes 55001576
chr17 56012544 56012900 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773866
chr17 56012544 56012900 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108274761
Genes associated with rs1017528[chr17:56012551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More