EnhancerDB
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  3. rs10180252[chr2:70339484]
Enhancers that have rs10180252[chr2:70339484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10180252[chr2:70339484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70339476 70339486 SP1 JASPAR yes 74896046
chr2 70339476 70339486 ZNF740 JASPAR yes 74896047
chr2 70339478 70339488 SP1 JASPAR yes 74896048
chr2 70339478 70339488 ZNF740 JASPAR yes 74896049
Genes associated with rs10180252[chr2:70339484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 70674412 70781325 - TGFA ENSG00000163235.11 70781325 334928 Thyroid 0.222746 2439