EnhancerDB
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  3. rs10195250[chr2:232544957]
Enhancers that have rs10195250[chr2:232544957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10195250[chr2:232544957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232544681 232546691 POLR2A UCSC Txn Factor no Conserved 108435746
chr2 232544681 232546691 POLR2A UCSC Txn Factor no Conserved 108435747
chr2 232544925 232546292 TAF1 UCSC Txn Factor no Conserved 108435748
chr2 232544948 232544959 NFE2 JASPAR yes 81735729
chr2 232544951 232544961 SP1 JASPAR yes 81735730
Genes associated with rs10195250[chr2:232544957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More