EnhancerDB
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  3. rs1030417[chr15:42216018]
Enhancers that have rs1030417[chr15:42216018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1030417[chr15:42216018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42216005 42216020 STAT2 JASPAR yes 23005722
chr15 42216007 42216028 IRF1 JASPAR yes 23005723
chr15 42216009 42216024 IRF9 JASPAR yes 23005724
chr15 42216011 42216025 STAT1 JASPAR yes 23005725
chr15 42216012 42216024 IRF1 JASPAR yes 23005726
Genes associated with rs1030417[chr15:42216018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More