EnhancerDB
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  3. rs10458385[chr1:19767402]
Enhancers that have rs10458385[chr1:19767402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10458385[chr1:19767402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19767392 19767403 FOXA1 JASPAR yes 27190600
chr1 19767393 19767405 FOXC2 JASPAR yes 27190601
chr1 19767394 19767406 FOXI1 JASPAR yes 27190602
chr1 19767399 19767408 VENTX JASPAR yes 27190603
chr1 19767399 19767409 EN2 JASPAR yes 27190604
chr1 19767399 19767409 ESX1 JASPAR yes 27190605
chr1 19767399 19767409 GBX2 JASPAR yes 27190606
chr1 19767400 19767408 BARX1 JASPAR yes 27190607
Genes associated with rs10458385[chr1:19767402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More